RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 HSBP1O75506 76 aa12.13□□□□□ -0.47
TRAPPC4-203ENST00000447216 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-203ENST00000447216 TTC32Q5I0X7 151 aa12.13□□□□□ -0.47
TRAPPC4-203ENST00000447216 Q6ZUT4 128 aa12.13□□□□□ -0.47
TRAPPC4-203ENST00000447216 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
TRAPPC4-203ENST00000447216 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
TRAPPC4-203ENST00000447216 HBDP02042 147 aa12.12□□□□□ -0.47
TRAPPC4-203ENST00000447216 G0S2P27469 103 aa12.12□□□□□ -0.47
TRAPPC4-203ENST00000447216 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
TRAPPC4-203ENST00000447216 Q6ZR54 194 aa12.12□□□□□ -0.47
TRAPPC4-203ENST00000447216 LINC00269Q8N2A0 174 aa12.12□□□□□ -0.47
TRAPPC4-203ENST00000447216 C10orf126Q8N4M7 172 aa12.12□□□□□ -0.47
TRAPPC4-203ENST00000447216 FAM104AQ969W3 186 aa12.12□□□□□ -0.47
TRAPPC4-203ENST00000447216 IGKV3OR2-268A0A0C4DH90 116 aa12.11□□□□□ -0.47
TRAPPC4-203ENST00000447216 IBA57-AS1B1ANH7 110 aa12.11□□□□□ -0.47
TRAPPC4-203ENST00000447216 UBE2WQ96B02 151 aa12.11□□□□□ -0.47
TRAPPC4-203ENST00000447216 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
TRAPPC4-203ENST00000447216 Q9HAA7 133 aa12.11□□□□□ -0.47
TRAPPC4-203ENST00000447216 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
TRAPPC4-203ENST00000447216 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
TRAPPC4-203ENST00000447216 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
TRAPPC4-203ENST00000447216 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
TRAPPC4-203ENST00000447216 ZNF664Q8N3J9 261 aa12.1□□□□□ -0.47
TRAPPC4-203ENST00000447216 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
TRAPPC4-203ENST00000447216 CSDC2Q9Y534 153 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-203ENST00000447216 PDZD11Q5EBL8 140 aa12.09□□□□□ -0.47
TRAPPC4-203ENST00000447216 ZC2HC1BQ5TFG8 222 aa12.09□□□□□ -0.47
TRAPPC4-203ENST00000447216 K7EP13 123 aa12.08□□□□□ -0.48
TRAPPC4-203ENST00000447216 CRPP02741 224 aa12.08□□□□□ -0.48
TRAPPC4-203ENST00000447216 MRPS36P82909 103 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-203ENST00000447216 REG3AQ06141 175 aa12.08□□□□□ -0.48
TRAPPC4-203ENST00000447216 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-203ENST00000447216 ERASQ7Z444 233 aa12.08□□□□□ -0.48
TRAPPC4-203ENST00000447216 LINC00173Q6ZV60 143 aa12.07□□□□□ -0.48
TRAPPC4-203ENST00000447216 TMEM141Q96I45 108 aa12.07□□□□□ -0.48
TRAPPC4-203ENST00000447216 TIMM17AQ99595 171 aa12.07□□□□□ -0.48
TRAPPC4-203ENST00000447216 PRR34Q9NV39 138 aa12.07□□□□□ -0.48
TRAPPC4-203ENST00000447216 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
TRAPPC4-203ENST00000447216 LINC01549A6NIU2 74 aa12.06□□□□□ -0.48
TRAPPC4-203ENST00000447216 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
TRAPPC4-203ENST00000447216 DNAH2Q9P225 4427 aa12.04□□□□□ -0.48
TRAPPC4-203ENST00000447216 TRAV8-3A0A0A6YYJ7 113 aa12.04□□□□□ -0.48
TRAPPC4-203ENST00000447216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-203ENST00000447216 FABP4P15090 132 aa12.04□□□□□ -0.48
TRAPPC4-203ENST00000447216 C6orf223Q8N319 242 aa12.04□□□□□ -0.48
TRAPPC4-203ENST00000447216 FRAS1Q86XX4 4008 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 IGKV2D-24A0A075B6R9 120 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 TRAV13-1A0A0B4J241 112 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 LINC00959A0A1B0GUT2 108 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 MIAQ16674 131 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 Q6ZN92 141 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 TEX43Q6ZNM6 134 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 AMELXQ99217 191 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 VCX2Q9H322 139 aa12.03□□□□□ -0.48
TRAPPC4-203ENST00000447216 ATP5LO75964 103 aa12.02□□□□□ -0.49
TRAPPC4-203ENST00000447216 LEPROTL1O95214 131 aa12.02□□□□□ -0.49
TRAPPC4-203ENST00000447216 S100A6P06703 90 aa12.02□□□□□ -0.49
TRAPPC4-203ENST00000447216 NPSP0C0P6 89 aa12.02□□□□□ -0.49
TRAPPC4-203ENST00000447216 C1orf134Q5TEV5 83 aa12.02□□□□□ -0.49
TRAPPC4-203ENST00000447216 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
TRAPPC4-203ENST00000447216 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-203ENST00000447216 IFI27L1Q96BM0 104 aa12.01□□□□□ -0.49
TRAPPC4-203ENST00000447216 PAPPA-AS1Q5QFB9 102 aa12□□□□□ -0.49
TRAPPC4-203ENST00000447216 LCE2DQ5TA82 110 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-203ENST00000447216 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
TRAPPC4-203ENST00000447216 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 CCL25O15444 150 aa11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 SS18Q15532 418 aa11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 Q6ZRN7 208 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 RMI2Q96E14 147 aa11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 C2orf88Q9BSF0 95 aa11.99□□□□□ -0.49
TRAPPC4-203ENST00000447216 RYR3Q15413 4870 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 TRAV8-4A0A0B4J246 113 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 XCL1P47992 114 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 UBE2D1P51668 147 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 SNRPEP62304 92 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 PMVKQ15126 192 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 CST9LQ9H4G1 147 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 HSPB8Q9UJY1 196 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 DNAH17Q9UFH2 4485 aa11.98□□□□□ -0.49
TRAPPC4-203ENST00000447216 GAGE12HA6NDE8 117 aa11.97□□□□□ -0.49
TRAPPC4-203ENST00000447216 RTL8CO15255 209 aa11.97□□□□□ -0.49
TRAPPC4-203ENST00000447216 PRSS1P07477 247 aa11.97□□□□□ -0.49
TRAPPC4-203ENST00000447216 H0Y8G0 127 aa11.96□□□□□ -0.49
TRAPPC4-203ENST00000447216 PSCAO43653 123 aa11.96□□□□□ -0.49
TRAPPC4-203ENST00000447216 C4orf48Q5BLP8 95 aa11.96□□□□□ -0.49
TRAPPC4-203ENST00000447216 MAPKAPK5-AS1Q8N8E1 139 aa11.96□□□□□ -0.49
TRAPPC4-203ENST00000447216 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
TRAPPC4-203ENST00000447216 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
TRAPPC4-203ENST00000447216 LINC00242Q5T6M2 205 aa11.95□□□□□ -0.5
TRAPPC4-203ENST00000447216 C5orf52A6NGY3 159 aa11.94□□□□□ -0.5
TRAPPC4-203ENST00000447216 COX6A2Q02221 97 aa11.94□□□□□ -0.5
TRAPPC4-203ENST00000447216 FOXI1Q12951 378 aa11.94□□□□□ -0.5
TRAPPC4-203ENST00000447216 S100A2P29034 98 aa11.93□□□□□ -0.5
TRAPPC4-203ENST00000447216 PACRGQ96M98 296 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms