RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 TEX261Q6UWH6 196 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 GKN2Q86XP6 184 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 ARL17AQ8IVW1 177 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 OTOSQ8NHW6 89 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 ZNF431Q8TF32 576 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 LINC00470Q9BZP3 86 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 MPC1Q9Y5U8 109 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 KIAA1549LQ6ZVL6 1849 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 MYO7BQ6PIF6 2116 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 SCN3AQ9NY46 2000 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 A0A0D9SFI3 127 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 LINC00587B1AMM8 73 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 ZNF736B4DX44 427 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 ZNF670-ZNF695F2Z2N8 137 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 MIR22HGQ0VDD5 57 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 CLLU1Q5K131 121 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 FOXI2Q6ZQN5 318 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 REG4Q9BYZ8 158 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 SLC35B3Q9H1N7 401 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 COL7A1Q02388 2944 aa1.97□□□□□ -2.09
HMGB1P48-201ENST00000446155 HERC2O95714 4834 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 MYOFQ9NZM1 2061 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 IGHV1-24A0A0C4DH33 117 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 SPTY2D1-AS1A0A0U1RR47 76 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 DLEU1O43261 78 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 RBP4P02753 201 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 EMX2Q04743 252 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 KRTAP13-4Q3LI77 160 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 CASC2Q6XLA1 102 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 Q8N2B8 174 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 FDCSPQ8NFU4 85 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 PATE1Q8WXA2 126 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 CIB3Q96Q77 187 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 LSM2Q9Y333 95 aaKnown RBP1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 ANK1P16157 1881 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 DOCK10Q96BY6 2186 aa1.96□□□□□ -2.1
HMGB1P48-201ENST00000446155 UNC13CQ8NB66 2214 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 INTS1Q8N201 2190 aaKnown RBP1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 TRBV20-1A0A075B6N2 111 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 TRGV2A0A075B6R0 118 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 A6NN06 94 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 FREM3P0C091 2139 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 IZUMO2Q6UXV1 221 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 ZCCHC23Q6ZST2 131 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 OR10AG1Q8NH19 301 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 LINC00052Q96N35 136 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 CGREF1Q99674 301 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 NAA38Q9BRA0 125 aaKnown RBP1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 C2orf88Q9BSF0 95 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 ORMDL1Q9P0S3 153 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 KLK9Q9UKQ9 250 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 SACSQ9NZJ4 4579 aa1.95□□□□□ -2.1
HMGB1P48-201ENST00000446155 MYH9P35579 1960 aaKnown RBP1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 MYH7P12883 1935 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 RYR2Q92736 4967 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 FAM92AA1XBS5 289 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 IFITM5A6NNB3 132 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 F8W1H4 67 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 YPEL1O60688 119 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 EDF1O60869 148 aaKnown RBP1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 PLGLB1Q02325 96 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 FAM74A1Q5RGS3 127 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 Q6ZS92 163 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 C15orf53Q8NAA6 179 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 ZNF625Q96I27 306 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 SDF2Q99470 211 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 SMIM7Q9BQ49 75 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 TMEM191AQ9H0A3 160 aa1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 DYNC2H1Q8NCM8 4307 aaKnown RBP1.94□□□□□ -2.1
HMGB1P48-201ENST00000446155 ALPK2Q86TB3 2170 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 MYH6P13533 1939 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 CMYA5Q8N3K9 4069 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 ROS1P08922 2347 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 FAM25AB3EWG3 89 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 FAM25CB3EWG5 89 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 FAM25GB3EWG6 89 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 M0R129 80 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 HCRTO43612 131 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 COX7CP15954 63 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 CCSMST1Q4G0I0 132 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 SAR1AQ9NR31 198 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 DNAH1Q9P2D7 4330 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 STAB2Q8WWQ8 2551 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 HEATR1Q9H583 2144 aaKnown RBP1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 CACNA1CQ13936 2221 aa1.93□□□□□ -2.1
HMGB1P48-201ENST00000446155 PLXNA2O75051 1894 aa1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 CDC42EP2O14613 210 aa1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 MRPS14O60783 128 aaKnown RBP1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 APOC1P02654 83 aa1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 TFF3Q07654 80 aa1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 ATOH7Q8N100 152 aa1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 C5orf17Q8NAS9 161 aa1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 CDC42SE1Q9NRR8 79 aa1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 TNRC6AQ8NDV7 1962 aaKnown RBP1.92□□□□□ -2.1
HMGB1P48-201ENST00000446155 ABCA1O95477 2261 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms