RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
MSH6-204ENST00000445503 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
MSH6-204ENST00000445503 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
MSH6-204ENST00000445503 LINC00158P58513 81 aa8.72□□□□□ -1.01
MSH6-204ENST00000445503 TMEM263Q8WUH6 116 aaKnown RBP8.72□□□□□ -1.01
MSH6-204ENST00000445503 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
MSH6-204ENST00000445503 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.01
MSH6-204ENST00000445503 A0A0B4J2C4 111 aa8.71□□□□□ -1.02
MSH6-204ENST00000445503 CDIP1Q9H305 208 aa8.71□□□□□ -1.02
MSH6-204ENST00000445503 DNAL4O96015 105 aa8.7□□□□□ -1.02
MSH6-204ENST00000445503 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
MSH6-204ENST00000445503 ADAMTSL4-AS1Q5T5F5 129 aa8.7□□□□□ -1.02
MSH6-204ENST00000445503 Q6ZSN1 163 aa8.7□□□□□ -1.02
MSH6-204ENST00000445503 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
MSH6-204ENST00000445503 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
MSH6-204ENST00000445503 RNASE1P07998 156 aaKnown RBP8.69□□□□□ -1.02
MSH6-204ENST00000445503 EDA2RQ9HAV5 297 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 Q96MF0 132 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 KLK9Q2XQG4 91 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 MAP6D1Q9H9H5 199 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 NDUFA7O95182 113 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 RBMY1A1P0DJD3 496 aaKnown RBP8.69□□□□□ -1.02
MSH6-204ENST00000445503 RBMY1CP0DJD4 496 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 RBMY1FQ15415 496 aaKnown RBP8.69□□□□□ -1.02
MSH6-204ENST00000445503 MIAQ16674 131 aa8.69□□□□□ -1.02
MSH6-204ENST00000445503 PFN2P35080 140 aa8.68□□□□□ -1.02
MSH6-204ENST00000445503 COPS9Q8WXC6 57 aa8.68□□□□□ -1.02
MSH6-204ENST00000445503 PRORYQ9H606 182 aa8.68□□□□□ -1.02
MSH6-204ENST00000445503 POM121L12Q8N7R1 296 aa8.68□□□□□ -1.02
MSH6-204ENST00000445503 IFITM1P13164 125 aa8.68□□□□□ -1.02
MSH6-204ENST00000445503 V9GYY9 64 aa8.68□□□□□ -1.02
MSH6-204ENST00000445503 DEFB130BP0DP73 79 aa8.67□□□□□ -1.02
MSH6-204ENST00000445503 DEFB130AP0DP74 79 aa8.67□□□□□ -1.02
MSH6-204ENST00000445503 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
MSH6-204ENST00000445503 TRAV4A0A0B4J268 109 aa8.67□□□□□ -1.02
MSH6-204ENST00000445503 HERVK_113P63121 156 aa8.67□□□□□ -1.02
MSH6-204ENST00000445503 J3QLI3 93 aa8.67□□□□□ -1.02
MSH6-204ENST00000445503 A0A0U1RQV1 116 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 F5H768 121 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 PAX4O43316 350 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 Q6ZTI0 123 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 CRPP02741 224 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 UBE2D4Q9Y2X8 147 aa8.66□□□□□ -1.02
MSH6-204ENST00000445503 RS1O15537 224 aa8.65□□□□□ -1.02
MSH6-204ENST00000445503 MRPS36P82909 103 aaKnown RBP8.65□□□□□ -1.02
MSH6-204ENST00000445503 GAGE2AQ6NT46 116 aa8.65□□□□□ -1.02
MSH6-204ENST00000445503 TMEM243Q9BU79 118 aa8.65□□□□□ -1.02
MSH6-204ENST00000445503 PYGO1Q9Y3Y4 419 aa8.65□□□□□ -1.02
MSH6-204ENST00000445503 FLNCQ14315 2725 aa8.65□□□□□ -1.03
MSH6-204ENST00000445503 FHL3Q13643 280 aa8.65□□□□□ -1.03
MSH6-204ENST00000445503 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
MSH6-204ENST00000445503 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
MSH6-204ENST00000445503 RBMY1BA6NDE4 496 aaKnown RBP8.64□□□□□ -1.03
MSH6-204ENST00000445503 RBMY1EA6NEQ0 496 aaKnown RBP8.64□□□□□ -1.03
MSH6-204ENST00000445503 RBMY1DP0C7P1 496 aaKnown RBP8.64□□□□□ -1.03
MSH6-204ENST00000445503 C5orf38Q86SI9 138 aa8.64□□□□□ -1.03
MSH6-204ENST00000445503 A0A096LPF7 62 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 PIK3CD-AS1Q5SR53 167 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 Q6YL49 198 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 AMELXQ99217 191 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 DEFB114Q30KQ6 69 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 CLPSL2Q6UWE3 100 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 BRI3O95415 125 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
MSH6-204ENST00000445503 H7C423 109 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 CCL24O00175 119 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 CRLF1O75462 422 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 COX6A2Q02221 97 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 S100A7L2Q5SY68 101 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 Q9HAA7 133 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 CELSR1Q9NYQ6 3014 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 C6orf226Q5I0X4 101 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 K7EQD1 137 aa8.62□□□□□ -1.03
MSH6-204ENST00000445503 LINC00694P0DN24 101 aa8.61□□□□□ -1.03
MSH6-204ENST00000445503 H3BT86 120 aa8.61□□□□□ -1.03
MSH6-204ENST00000445503 IGHV4-31P0DP07 118 aa8.61□□□□□ -1.03
MSH6-204ENST00000445503 NDUFV3P56181 108 aaKnown RBP8.61□□□□□ -1.03
MSH6-204ENST00000445503 WFDC10AQ9H1F0 79 aa8.6□□□□□ -1.03
MSH6-204ENST00000445503 RETNQ9HD89 108 aa8.6□□□□□ -1.03
MSH6-204ENST00000445503 KRTAP10-9P60411 292 aa8.6□□□□□ -1.03
MSH6-204ENST00000445503 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
MSH6-204ENST00000445503 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
MSH6-204ENST00000445503 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
MSH6-204ENST00000445503 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
MSH6-204ENST00000445503 HTN3P15516 51 aa8.59□□□□□ -1.03
MSH6-204ENST00000445503 C4orf3Q8WVX3 66 aa8.59□□□□□ -1.03
MSH6-204ENST00000445503 ITPR1Q14643 2758 aa8.58□□□□□ -1.04
MSH6-204ENST00000445503 ZANQ9Y493 2812 aa8.58□□□□□ -1.04
MSH6-204ENST00000445503 NDUFA1O15239 70 aa8.58□□□□□ -1.04
MSH6-204ENST00000445503 PF4P02776 101 aa8.58□□□□□ -1.04
MSH6-204ENST00000445503 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
MSH6-204ENST00000445503 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
MSH6-204ENST00000445503 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
MSH6-204ENST00000445503 XCL1P47992 114 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms