RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 H3BS24 57 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 LINC01547P58512 204 aaPredicted RBP3.79□□□□□ -1.8
SCN11A-202ENST00000444237 PRR4Q16378 134 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 GPHB5Q86YW7 130 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 IL17DQ8TAD2 202 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 Q8N814 137 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 SMCR5Q8TEV8 140 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 E7EQL1 145 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 C22orf34Q6ZV56 151 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 WFDC10AQ9H1F0 79 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 ANGP03950 147 aaKnown RBP3.78□□□□□ -1.8
SCN11A-202ENST00000444237 SPAG11BQ08648 103 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 Q6ZVQ6 151 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 AMELXQ99217 191 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 DOPEY2Q9Y3R5 2298 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 BEAN1Q3B7T3 259 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 DOCK10Q96BY6 2186 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 TNCP24821 2201 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 ETDCA0A1B0GVM5 59 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 HTN3P15516 51 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 FAM30AQ9NZY2 134 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 PCNX2A6NKB5 2137 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 TNFRSF13BO14836 293 aaPredicted RBP3.78□□□□□ -1.8
SCN11A-202ENST00000444237 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.78□□□□□ -1.8
SCN11A-202ENST00000444237 Q6ZQY7 126 aa3.78□□□□□ -1.8
SCN11A-202ENST00000444237 CCL18P55774 89 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 KLKP1Q107X0 134 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 Q8N9W7 124 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 A0A087WZ39 114 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 TRBV6-4A0A1B0GX49 114 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 CCL24O00175 119 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 DEFB130BP0DP73 79 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 DEFB130AP0DP74 79 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 LINC00269Q8N2A0 174 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 DSCR9P59020 149 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 CLPSL2Q6UWE3 100 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 CELA1Q9UNI1 258 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 IGF1P05019 195 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 CACNA1EQ15878 2313 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 ERC2-IT1O76042 136 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 PRR15Q8IV56 129 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 MDFIQ99750 246 aa3.77□□□□□ -1.81
SCN11A-202ENST00000444237 PRR9Q5T870 116 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 MUC7Q8TAX7 377 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 CCDC140Q96MF4 163 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 LINC01600Q96MT4 127 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 CACNA1BQ00975 2339 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 WISP2O76076 250 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 DEFB1P60022 68 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 NCOR1O75376 2440 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 C2orf48Q96LS8 159 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 COL5A1P20908 1838 aaPredicted RBP3.76□□□□□ -1.81
SCN11A-202ENST00000444237 FREM1Q5H8C1 2179 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 DEFB112Q30KQ8 113 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 Q96MF0 132 aa3.76□□□□□ -1.81
SCN11A-202ENST00000444237 NOP10Q9NPE3 64 aaKnown RBP3.76□□□□□ -1.81
SCN11A-202ENST00000444237 BRD3OSQ6XYD6 125 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 PLXNB1O43157 2135 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 KLLNB2CW77 178 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 C16orf74Q96GX8 76 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 ZNF580Q9UK33 172 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 EP300Q09472 2414 aaPredicted RBP3.75□□□□□ -1.81
SCN11A-202ENST00000444237 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 H7BZZ5 65 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 COX17Q14061 63 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 Q5XG85 94 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 C3orf84H3BNL1 204 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 REG3AQ06141 175 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 LINC00242Q5T6M2 205 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 IGFL2Q6UWQ7 119 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 CAMK2N2Q96S95 79 aa3.75□□□□□ -1.81
SCN11A-202ENST00000444237 APOC4P55056 127 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 FAM215AQ9Y5M1 114 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 RNF223E7ERA6 249 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 GRNP28799 593 aaKnown RBP3.74□□□□□ -1.81
SCN11A-202ENST00000444237 NANOS2P60321 138 aaKnown RBP3.74□□□□□ -1.81
SCN11A-202ENST00000444237 LINC00482Q8N8I6 264 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 MAPK1IP1LQ8NDC0 245 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 B9D2Q9BPU9 175 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 UNQ9165/PRO28630Q6UXU0 137 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 LINC00208Q96KT6 92 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 CPAMD8Q8IZJ3 1885 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 COL4A2P08572 1712 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 MUC6Q6W4X9 2439 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 MED13Q9UHV7 2174 aa3.74□□□□□ -1.81
SCN11A-202ENST00000444237 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 C5orf56Q8N8D9 126 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 AKAP6Q13023 2319 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 ADORA2A-AS1P86434 159 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 C1orf158Q8N1D5 194 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 ZFHX2Q9C0A1 2572 aaPredicted RBP3.73□□□□□ -1.81
SCN11A-202ENST00000444237 GPR179Q6PRD1 2367 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 MALRD1Q5VYJ5 2156 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 HCG22E2RYF7 251 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 LY6HO94772 140 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 WFDC10BQ8IUB3 73 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms