RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 C2orf66Q6UXQ4 117 aa11.96□□□□□ -0.49
CIRBP-203ENST00000444172 ZNF664Q8N3J9 261 aa11.96□□□□□ -0.49
CIRBP-203ENST00000444172 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.49
CIRBP-203ENST00000444172 IGLV10-54A0A075B6I4 117 aa11.95□□□□□ -0.5
CIRBP-203ENST00000444172 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
CIRBP-203ENST00000444172 SPANXA1Q9NS26 97 aa11.95□□□□□ -0.5
CIRBP-203ENST00000444172 CYSLTR1Q9Y271 337 aa11.95□□□□□ -0.5
CIRBP-203ENST00000444172 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
CIRBP-203ENST00000444172 COX11Q9Y6N1 276 aa11.95□□□□□ -0.5
CIRBP-203ENST00000444172 LINC00614P0C842 121 aa11.94□□□□□ -0.5
CIRBP-203ENST00000444172 G0S2P27469 103 aa11.94□□□□□ -0.5
CIRBP-203ENST00000444172 RNASE13Q5GAN3 156 aaKnown RBP11.94□□□□□ -0.5
CIRBP-203ENST00000444172 OPRPNQ99935 248 aaPredicted RBP11.93□□□□□ -0.5
CIRBP-203ENST00000444172 DNAH2Q9P225 4427 aa11.92□□□□□ -0.5
CIRBP-203ENST00000444172 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
CIRBP-203ENST00000444172 LINC01546A6NGU7 62 aa11.92□□□□□ -0.5
CIRBP-203ENST00000444172 RAB5BP61020 215 aa11.92□□□□□ -0.5
CIRBP-203ENST00000444172 Q6ZUT4 128 aa11.92□□□□□ -0.5
CIRBP-203ENST00000444172 AP5S1Q9NUS5 200 aa11.92□□□□□ -0.5
CIRBP-203ENST00000444172 FRAS1Q86XX4 4008 aa11.91□□□□□ -0.5
CIRBP-203ENST00000444172 URB1-AS1Q96HZ7 61 aa11.91□□□□□ -0.5
CIRBP-203ENST00000444172 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
CIRBP-203ENST00000444172 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
CIRBP-203ENST00000444172 TOMM6Q96B49 74 aa11.9□□□□□ -0.5
CIRBP-203ENST00000444172 DNAH10Q8IVF4 4471 aa11.9□□□□□ -0.5
CIRBP-203ENST00000444172 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
CIRBP-203ENST00000444172 EREGO14944 169 aa11.89□□□□□ -0.51
CIRBP-203ENST00000444172 SS18Q15532 418 aa11.89□□□□□ -0.51
CIRBP-203ENST00000444172 BAGE3Q86Y29 109 aa11.89□□□□□ -0.51
CIRBP-203ENST00000444172 BAALCQ8WXS3 180 aa11.89□□□□□ -0.51
CIRBP-203ENST00000444172 IGLV4-3A0A075B6K6 122 aa11.88□□□□□ -0.51
CIRBP-203ENST00000444172 A0A087WTM6 91 aa11.88□□□□□ -0.51
CIRBP-203ENST00000444172 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
CIRBP-203ENST00000444172 MRPS36P82909 103 aaKnown RBP11.88□□□□□ -0.51
CIRBP-203ENST00000444172 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
CIRBP-203ENST00000444172 TMEM141Q96I45 108 aa11.88□□□□□ -0.51
CIRBP-203ENST00000444172 SCGB3A1Q96QR1 104 aa11.88□□□□□ -0.51
CIRBP-203ENST00000444172 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
CIRBP-203ENST00000444172 GAGE12HA6NDE8 117 aa11.87□□□□□ -0.51
CIRBP-203ENST00000444172 LECT2O14960 151 aa11.87□□□□□ -0.51
CIRBP-203ENST00000444172 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
CIRBP-203ENST00000444172 FAM104AQ969W3 186 aa11.87□□□□□ -0.51
CIRBP-203ENST00000444172 IGIPA6NJ69 53 aa11.86□□□□□ -0.51
CIRBP-203ENST00000444172 CCL25O15444 150 aa11.86□□□□□ -0.51
CIRBP-203ENST00000444172 XCL1P47992 114 aa11.86□□□□□ -0.51
CIRBP-203ENST00000444172 KRTAP26-1Q6PEX3 210 aa11.86□□□□□ -0.51
CIRBP-203ENST00000444172 Q6ZN92 141 aa11.86□□□□□ -0.51
CIRBP-203ENST00000444172 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 IFITM10A6NMD0 228 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 C1orf196B1AJZ1 125 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 TEX43Q6ZNM6 134 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 ERASQ7Z444 233 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 CHCHD1Q96BP2 118 aaKnown RBP11.85□□□□□ -0.51
CIRBP-203ENST00000444172 TIMM17AQ99595 171 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 VCX2Q9H322 139 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 DNAH17Q9UFH2 4485 aa11.85□□□□□ -0.51
CIRBP-203ENST00000444172 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
CIRBP-203ENST00000444172 HBDP02042 147 aa11.84□□□□□ -0.51
CIRBP-203ENST00000444172 WFDC2Q14508 124 aa11.84□□□□□ -0.51
CIRBP-203ENST00000444172 ZC2HC1BQ5TFG8 222 aa11.84□□□□□ -0.51
CIRBP-203ENST00000444172 NPSP0C0P6 89 aa11.83□□□□□ -0.52
CIRBP-203ENST00000444172 PAPPA-AS1Q5QFB9 102 aa11.83□□□□□ -0.52
CIRBP-203ENST00000444172 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
CIRBP-203ENST00000444172 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
CIRBP-203ENST00000444172 A0A096LNJ9 63 aa11.82□□□□□ -0.52
CIRBP-203ENST00000444172 HSBP1O75506 76 aa11.82□□□□□ -0.52
CIRBP-203ENST00000444172 USP17L23D6RBM5 183 aa11.81□□□□□ -0.52
CIRBP-203ENST00000444172 SERF1AO75920 110 aa11.81□□□□□ -0.52
CIRBP-203ENST00000444172 FOXI1Q12951 378 aa11.81□□□□□ -0.52
CIRBP-203ENST00000444172 CD164L2Q6UWJ8 174 aa11.81□□□□□ -0.52
CIRBP-203ENST00000444172 Q8N814 137 aa11.81□□□□□ -0.52
CIRBP-203ENST00000444172 AMELXQ99217 191 aa11.81□□□□□ -0.52
CIRBP-203ENST00000444172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BKO60814 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BJP06899 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BOP23527 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BBP33778 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 FUSP35637 526 aaKnown RBP eCLIP11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BDP58876 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BCP62807 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST2H2BEQ16778 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.8□□□□□ -0.52
CIRBP-203ENST00000444172 FAM19A2Q8N3H0 131 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BHQ93079 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BNQ99877 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 HIST1H2BMQ99879 126 aa11.8□□□□□ -0.52
CIRBP-203ENST00000444172 LINC00173Q6ZV60 143 aa11.79□□□□□ -0.52
CIRBP-203ENST00000444172 FAT2Q9NYQ8 4349 aa11.79□□□□□ -0.52
CIRBP-203ENST00000444172 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.78□□□□□ -0.52
CIRBP-203ENST00000444172 NUPR1O60356 82 aa11.78□□□□□ -0.52
CIRBP-203ENST00000444172 KRTAP10-2P60368 255 aa11.78□□□□□ -0.52
CIRBP-203ENST00000444172 C14orf177Q52M58 125 aa11.78□□□□□ -0.52
CIRBP-203ENST00000444172 PDZD11Q5EBL8 140 aa11.78□□□□□ -0.52
CIRBP-203ENST00000444172 UBE2D1P51668 147 aa11.77□□□□□ -0.53
CIRBP-203ENST00000444172 NDUFA6P56556 154 aa11.77□□□□□ -0.53
CIRBP-203ENST00000444172 LINC00310P59036 64 aa11.77□□□□□ -0.53
CIRBP-203ENST00000444172 CFAP161Q6P656 301 aa11.77□□□□□ -0.53
CIRBP-203ENST00000444172 C5orf38Q86SI9 138 aa11.77□□□□□ -0.53
CIRBP-203ENST00000444172 ATP5LO75964 103 aa11.76□□□□□ -0.53
CIRBP-203ENST00000444172 MALP21145 153 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms