RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 HLA-DQA1P01909 254 aa8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 ZNF25P17030 456 aaPredicted RBP8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 FCER1GP30273 86 aa8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 SVBPQ8N300 66 aa8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 RMI2Q96E14 147 aa8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 KIR2DL4Q99706 377 aa8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 GNB1LQ9BYB4 327 aa8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 LAMTOR2Q9Y2Q5 125 aa8.39□□□□□ -1.07
PDLIM2-212ENST00000443561 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 IGKV3OR2-268A0A0C4DH90 116 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 SNAPINO95295 136 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 AMMECR1LQ6DCA0 310 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 CDPF1Q6NVV7 123 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 OR5A1Q8NGJ0 315 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 OPRPNQ99935 248 aaPredicted RBP8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 PGPEP1Q9NXJ5 209 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 COX11Q9Y6N1 276 aa8.38□□□□□ -1.07
PDLIM2-212ENST00000443561 PRSS1P07477 247 aa8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 S100PP25815 95 aa8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 CBLN2Q8IUK8 224 aa8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 Q8N8P6 123 aa8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 CSDC2Q9Y534 153 aaKnown RBP8.37□□□□□ -1.07
PDLIM2-212ENST00000443561 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 LINC00959A0A1B0GUT2 108 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 EREGO14944 169 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 IFI27P40305 119 aaPredicted RBP8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 XGP55808 180 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 FOXI1Q12951 378 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 CHCHD10Q8WYQ3 142 aaPredicted RBP8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 FAM30AQ9NZY2 134 aa8.36□□□□□ -1.07
PDLIM2-212ENST00000443561 IGLV5-52A0A0A0MRZ9 124 aa8.35□□□□□ -1.07
PDLIM2-212ENST00000443561 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
PDLIM2-212ENST00000443561 SLPIP03973 132 aa8.35□□□□□ -1.07
PDLIM2-212ENST00000443561 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
PDLIM2-212ENST00000443561 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
PDLIM2-212ENST00000443561 LINC01546A6NGU7 62 aa8.34□□□□□ -1.07
PDLIM2-212ENST00000443561 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
PDLIM2-212ENST00000443561 NDUFA5Q16718 116 aa8.34□□□□□ -1.07
PDLIM2-212ENST00000443561 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 CCL25O15444 150 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 GCSHP23434 173 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 HAMPP81172 84 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 ZC2HC1BQ5TFG8 222 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 Q6ZSA8 131 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 LINC00173Q6ZV60 143 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 TMEM101Q96IK0 257 aa8.33□□□□□ -1.08
PDLIM2-212ENST00000443561 MT-ND6P03923 174 aa8.32□□□□□ -1.08
PDLIM2-212ENST00000443561 MRPS36P82909 103 aaKnown RBP8.32□□□□□ -1.08
PDLIM2-212ENST00000443561 COX19Q49B96 90 aa8.32□□□□□ -1.08
PDLIM2-212ENST00000443561 SPANXA1Q9NS26 97 aa8.32□□□□□ -1.08
PDLIM2-212ENST00000443561 A0A096LNJ9 63 aa8.31□□□□□ -1.08
PDLIM2-212ENST00000443561 XCL1P47992 114 aa8.31□□□□□ -1.08
PDLIM2-212ENST00000443561 FABP9Q0Z7S8 132 aa8.31□□□□□ -1.08
PDLIM2-212ENST00000443561 C2orf66Q6UXQ4 117 aa8.31□□□□□ -1.08
PDLIM2-212ENST00000443561 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
PDLIM2-212ENST00000443561 PYGO1Q9Y3Y4 419 aa8.31□□□□□ -1.08
PDLIM2-212ENST00000443561 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
PDLIM2-212ENST00000443561 C18orf32Q8TCD1 76 aa8.3□□□□□ -1.08
PDLIM2-212ENST00000443561 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
PDLIM2-212ENST00000443561 PANO1I0J062 215 aa8.29□□□□□ -1.08
PDLIM2-212ENST00000443561 RAB5AP20339 215 aa8.29□□□□□ -1.08
PDLIM2-212ENST00000443561 DGAT2L7PQ6IED9 249 aa8.29□□□□□ -1.08
PDLIM2-212ENST00000443561 TMEM18Q96B42 140 aa8.29□□□□□ -1.08
PDLIM2-212ENST00000443561 TRAPPC1Q9Y5R8 145 aa8.29□□□□□ -1.08
PDLIM2-212ENST00000443561 FAT1Q14517 4588 aa8.29□□□□□ -1.08
PDLIM2-212ENST00000443561 VPS13BQ7Z7G8 4022 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 ORMDL2Q53FV1 153 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 CD164L2Q6UWJ8 174 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 TOMM6Q96B49 74 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 AMELXQ99217 191 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 CYSLTR1Q9Y271 337 aa8.28□□□□□ -1.08
PDLIM2-212ENST00000443561 K7EMI3 77 aa8.27□□□□□ -1.09
PDLIM2-212ENST00000443561 SCO1O75880 301 aa8.27□□□□□ -1.09
PDLIM2-212ENST00000443561 CNBPP62633 177 aaKnown RBP8.27□□□□□ -1.09
PDLIM2-212ENST00000443561 COX6A2Q02221 97 aa8.27□□□□□ -1.09
PDLIM2-212ENST00000443561 C14orf177Q52M58 125 aa8.27□□□□□ -1.09
PDLIM2-212ENST00000443561 C9orf163Q8N9P6 203 aa8.27□□□□□ -1.09
PDLIM2-212ENST00000443561 SMCO4Q9NRQ5 59 aa8.27□□□□□ -1.09
PDLIM2-212ENST00000443561 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
PDLIM2-212ENST00000443561 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
PDLIM2-212ENST00000443561 hDV102S1A0JD36 115 aa8.26□□□□□ -1.09
PDLIM2-212ENST00000443561 COLCA2A8K830 154 aa8.26□□□□□ -1.09
PDLIM2-212ENST00000443561 SS18Q15532 418 aa8.26□□□□□ -1.09
PDLIM2-212ENST00000443561 TMEM141Q96I45 108 aa8.26□□□□□ -1.09
PDLIM2-212ENST00000443561 IFITM10A6NMD0 228 aa8.25□□□□□ -1.09
PDLIM2-212ENST00000443561 C1orf196B1AJZ1 125 aa8.25□□□□□ -1.09
PDLIM2-212ENST00000443561 UBE2D1P51668 147 aa8.25□□□□□ -1.09
PDLIM2-212ENST00000443561 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
PDLIM2-212ENST00000443561 SDIM1Q6ZPB5 146 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms