RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 TMEM262E9PQX1 116 aa4.33□□□□□ -1.72
PTPRR-204ENST00000440835 IGKCP01834 107 aa4.33□□□□□ -1.72
PTPRR-204ENST00000440835 TCRAP04437 139 aa4.33□□□□□ -1.72
PTPRR-204ENST00000440835 DEFB131AP59861 70 aa4.33□□□□□ -1.72
PTPRR-204ENST00000440835 RIGQ13278 110 aa4.33□□□□□ -1.72
PTPRR-204ENST00000440835 ANKRD29Q8N6D5 301 aa4.33□□□□□ -1.72
PTPRR-204ENST00000440835 TMEM75Q8N9X5 138 aa4.33□□□□□ -1.72
PTPRR-204ENST00000440835 IGHV4-4A0A075B6R2 117 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 IGHV4-28A0A0C4DH34 117 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 BUB3O43684 328 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 NPYP01303 97 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 SNRPD3P62318 126 aaKnown RBP4.32□□□□□ -1.72
PTPRR-204ENST00000440835 Q86TA4 180 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 VPS13DQ5THJ4 4388 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 LOC107984156A0A0G2JMH3 177 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 A0A1B0GVY2 172 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 MRPS12O15235 138 aaKnown RBP4.32□□□□□ -1.72
PTPRR-204ENST00000440835 NDUFC2O95298 119 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 HLA-DMBP28068 263 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 UBE2D3P61077 147 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 UBE2D2P62837 147 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 ZNF493Q6ZR52 646 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 ARL17AQ8IVW1 177 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 CSNK1G2-AS1Q8NCQ2 148 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 LINC01587Q99440 93 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
PTPRR-204ENST00000440835 LOC107984640A0A0U1RRK4 108 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 SNCGO76070 127 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 GAS8-AS1O95177 125 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 TCL1BO95988 128 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 IGLC6P0CF74 106 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 HLA-DRB4P13762 266 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 MRPL51Q4U2R6 128 aaKnown RBP4.31□□□□□ -1.72
PTPRR-204ENST00000440835 FAM104BQ5XKR9 115 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 PRNTQ86SH4 94 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 ORMDL3Q8N138 153 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 HLA-DRB4X5D2U9 266 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 X6R8D5 127 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 PRSS1P07477 247 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 GIG44P09565 113 aaPredicted RBP4.31□□□□□ -1.72
PTPRR-204ENST00000440835 RBMY1A1P0DJD3 496 aaKnown RBP4.31□□□□□ -1.72
PTPRR-204ENST00000440835 RBMY1CP0DJD4 496 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 RBMY1FQ15415 496 aaKnown RBP4.31□□□□□ -1.72
PTPRR-204ENST00000440835 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 C9orf85Q96MD7 179 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 DEFB131BA0A096LNP1 70 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 RBAKDNA6NC62 111 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 H3BVH4 76 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 DPM2O94777 84 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 CRIP1P50238 77 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 RPL11P62913 178 aaKnown RBP4.31□□□□□ -1.72
PTPRR-204ENST00000440835 OR10J6PQ8NGY7 276 aa4.31□□□□□ -1.72
PTPRR-204ENST00000440835 IGHV3OR16-8A0A075B7F1 116 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 A8MWV9 139 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 SPART-AS1P0CW21 52 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 PSMG4Q5JS54 123 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 ODF3Q96PU9 254 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 JPT2Q9H910 190 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 MRPL35Q9NZE8 188 aaKnown RBP4.3□□□□□ -1.72
PTPRR-204ENST00000440835 DNAH17Q9UFH2 4485 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 TRAV8-2A0A0B4J237 113 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 OXTP01178 125 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 UBE2D1P51668 147 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 LYZL1Q6UWQ5 148 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.3□□□□□ -1.72
PTPRR-204ENST00000440835 Q6ZTC4 211 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 C15orf53Q8NAA6 179 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 CHCHD5Q9BSY4 110 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 IGHV3-49A0A0A0MS15 119 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 IGHV3-66A0A0C4DH42 116 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 H3BMM0 161 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 CKS2P33552 79 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 ASIPP42127 132 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 TWIST1Q15672 202 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 LINC01559Q495D7 138 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 C17orf77Q96MU5 243 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 KMT2AQ03164 3969 aa4.29□□□□□ -1.72
PTPRR-204ENST00000440835 IGHV3OR16-13A0A075B7E8 117 aa4.28□□□□□ -1.72
PTPRR-204ENST00000440835 IGHV3-74A0A0B4J1X5 117 aa4.28□□□□□ -1.72
PTPRR-204ENST00000440835 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
PTPRR-204ENST00000440835 Q6ZR54 194 aa4.28□□□□□ -1.72
PTPRR-204ENST00000440835 IGKV3-7A0A075B6H7 116 aa4.28□□□□□ -1.72
PTPRR-204ENST00000440835 LENEPQ9Y5L5 61 aa4.28□□□□□ -1.72
PTPRR-204ENST00000440835 A8MTW9 85 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 M0R3E3 92 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 Q5XG85 94 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 C8orf49Q96NF6 230 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 KNCNA6PVL3 124 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 RTL8CO15255 209 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms