RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 GTSF1LQ9H1H1 148 aa13.29□□□□□ -0.28
SNX17-203ENST00000440760 Q6ZUT4 128 aa13.29□□□□□ -0.28
SNX17-203ENST00000440760 CHTOPQ9Y3Y2 248 aaKnown RBP13.29□□□□□ -0.28
SNX17-203ENST00000440760 PRKDCP78527 4128 aaKnown RBP13.29□□□□□ -0.28
SNX17-203ENST00000440760 TMEM243Q9BU79 118 aa13.28□□□□□ -0.28
SNX17-203ENST00000440760 TRBV25-1A0A075B6N4 114 aa13.27□□□□□ -0.28
SNX17-203ENST00000440760 TRBV6-8A0A0A6YYG3 113 aa13.27□□□□□ -0.28
SNX17-203ENST00000440760 PMVKQ15126 192 aa13.27□□□□□ -0.28
SNX17-203ENST00000440760 BATFQ16520 125 aa13.27□□□□□ -0.28
SNX17-203ENST00000440760 PYGO1Q9Y3Y4 419 aa13.27□□□□□ -0.28
SNX17-203ENST00000440760 F8VRH5 84 aa13.27□□□□□ -0.29
SNX17-203ENST00000440760 DPM2O94777 84 aa13.27□□□□□ -0.29
SNX17-203ENST00000440760 CST9LQ9H4G1 147 aa13.27□□□□□ -0.29
SNX17-203ENST00000440760 SPANXA1Q9NS26 97 aa13.27□□□□□ -0.29
SNX17-203ENST00000440760 MRPS16Q9Y3D3 137 aaKnown RBP13.27□□□□□ -0.29
SNX17-203ENST00000440760 IGKCP01834 107 aa13.26□□□□□ -0.29
SNX17-203ENST00000440760 FGF6P10767 208 aa13.26□□□□□ -0.29
SNX17-203ENST00000440760 HNRNPA3P51991 378 aaKnown RBP13.26□□□□□ -0.29
SNX17-203ENST00000440760 STPG4Q8N801 248 aa13.26□□□□□ -0.29
SNX17-203ENST00000440760 CBY1Q9Y3M2 126 aa13.26□□□□□ -0.29
SNX17-203ENST00000440760 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
SNX17-203ENST00000440760 MEGF8Q7Z7M0 2845 aa13.25□□□□□ -0.29
SNX17-203ENST00000440760 IGLV4-69A0A075B6H9 119 aa13.25□□□□□ -0.29
SNX17-203ENST00000440760 GAGE6Q13070 117 aa13.25□□□□□ -0.29
SNX17-203ENST00000440760 UBE2L6O14933 153 aa13.24□□□□□ -0.29
SNX17-203ENST00000440760 ANKRD39Q53RE8 183 aa13.24□□□□□ -0.29
SNX17-203ENST00000440760 B9D2Q9BPU9 175 aa13.24□□□□□ -0.29
SNX17-203ENST00000440760 TP73-AS1Q9UF72 201 aa13.24□□□□□ -0.29
SNX17-203ENST00000440760 ICOSQ9Y6W8 199 aa13.24□□□□□ -0.29
SNX17-203ENST00000440760 ORAOV1Q8WV07 137 aa13.23□□□□□ -0.29
SNX17-203ENST00000440760 CHCHD5Q9BSY4 110 aa13.23□□□□□ -0.29
SNX17-203ENST00000440760 VCX2Q9H322 139 aa13.23□□□□□ -0.29
SNX17-203ENST00000440760 HSBP1L1C9JCN9 74 aa13.23□□□□□ -0.29
SNX17-203ENST00000440760 DEFB131BA0A096LNP1 70 aa13.22□□□□□ -0.29
SNX17-203ENST00000440760 MRPL23Q16540 153 aaKnown RBP13.22□□□□□ -0.29
SNX17-203ENST00000440760 DGAT2L7PQ6IED9 249 aa13.22□□□□□ -0.29
SNX17-203ENST00000440760 AMELXQ99217 191 aa13.22□□□□□ -0.29
SNX17-203ENST00000440760 C11orf86A6NJI1 115 aa13.21□□□□□ -0.29
SNX17-203ENST00000440760 PLNP26678 52 aa13.21□□□□□ -0.29
SNX17-203ENST00000440760 AMMECR1LQ6DCA0 310 aa13.21□□□□□ -0.29
SNX17-203ENST00000440760 TIMM21Q9BVV7 248 aa13.21□□□□□ -0.29
SNX17-203ENST00000440760 TMEM97Q5BJF2 176 aa13.2□□□□□ -0.3
SNX17-203ENST00000440760 PAPPA-AS1Q5QFB9 102 aa13.2□□□□□ -0.3
SNX17-203ENST00000440760 A0A0J9YXV3 536 aa13.19□□□□□ -0.3
SNX17-203ENST00000440760 MRPS36P82909 103 aaKnown RBP13.19□□□□□ -0.3
SNX17-203ENST00000440760 OR5A1Q8NGJ0 315 aa13.19□□□□□ -0.3
SNX17-203ENST00000440760 CHAC1Q9BUX1 264 aa13.18□□□□□ -0.3
SNX17-203ENST00000440760 IGLV4-60A0A075B6I1 120 aa13.18□□□□□ -0.3
SNX17-203ENST00000440760 CDC42SE2Q9NRR3 84 aa13.17□□□□□ -0.3
SNX17-203ENST00000440760 CSDC2Q9Y534 153 aaKnown RBP13.17□□□□□ -0.3
SNX17-203ENST00000440760 IGKV2D-26A0A0A0MRZ7 120 aa13.16□□□□□ -0.3
SNX17-203ENST00000440760 H7C423 109 aa13.16□□□□□ -0.3
SNX17-203ENST00000440760 MPV17L2Q567V2 206 aa13.16□□□□□ -0.3
SNX17-203ENST00000440760 Q8N3U1 123 aa13.16□□□□□ -0.3
SNX17-203ENST00000440760 TMEM101Q96IK0 257 aa13.16□□□□□ -0.3
SNX17-203ENST00000440760 TMEM262E9PQX1 116 aa13.15□□□□□ -0.3
SNX17-203ENST00000440760 H3BNG1 76 aa13.15□□□□□ -0.3
SNX17-203ENST00000440760 NMUP48645 174 aa13.15□□□□□ -0.3
SNX17-203ENST00000440760 TRAV10A0A0B4J240 114 aa13.14□□□□□ -0.31
SNX17-203ENST00000440760 TMEM170BQ5T4T1 132 aa13.14□□□□□ -0.31
SNX17-203ENST00000440760 COX11Q9Y6N1 276 aa13.14□□□□□ -0.31
SNX17-203ENST00000440760 UBE2D1P51668 147 aa13.14□□□□□ -0.31
SNX17-203ENST00000440760 SMAGPQ0VAQ4 97 aa13.14□□□□□ -0.31
SNX17-203ENST00000440760 NFE4Q86UQ8 179 aa13.14□□□□□ -0.31
SNX17-203ENST00000440760 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
SNX17-203ENST00000440760 TRAV13-1A0A0B4J241 112 aa13.13□□□□□ -0.31
SNX17-203ENST00000440760 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
SNX17-203ENST00000440760 HINT1P49773 126 aaPredicted RBP13.13□□□□□ -0.31
SNX17-203ENST00000440760 UBE2V1Q13404 147 aa13.13□□□□□ -0.31
SNX17-203ENST00000440760 LYPD5Q6UWN5 251 aa13.13□□□□□ -0.31
SNX17-203ENST00000440760 SH2D6Q7Z4S9 175 aa13.13□□□□□ -0.31
SNX17-203ENST00000440760 PTTG1IPP53801 180 aa13.12□□□□□ -0.31
SNX17-203ENST00000440760 RBX1P62877 108 aa13.12□□□□□ -0.31
SNX17-203ENST00000440760 ZNF22P17026 224 aaPredicted RBP13.12□□□□□ -0.31
SNX17-203ENST00000440760 LELP1Q5T871 98 aa13.12□□□□□ -0.31
SNX17-203ENST00000440760 PCP2Q8IVA1 136 aa13.12□□□□□ -0.31
SNX17-203ENST00000440760 CCL25O15444 150 aa13.11□□□□□ -0.31
SNX17-203ENST00000440760 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
SNX17-203ENST00000440760 COX8AP10176 69 aa13.1□□□□□ -0.31
SNX17-203ENST00000440760 K7EP13 123 aa13.09□□□□□ -0.31
SNX17-203ENST00000440760 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
SNX17-203ENST00000440760 TINCRA0A1B0GVN0 87 aa13.09□□□□□ -0.31
SNX17-203ENST00000440760 COX6A2Q02221 97 aa13.09□□□□□ -0.31
SNX17-203ENST00000440760 SLC25A34Q6PIV7 304 aa13.09□□□□□ -0.31
SNX17-203ENST00000440760 LINC00242Q5T6M2 205 aa13.08□□□□□ -0.32
SNX17-203ENST00000440760 TRAV8-6A0A0B4J262 113 aa13.07□□□□□ -0.32
SNX17-203ENST00000440760 ESRGQ1W209 222 aa13.07□□□□□ -0.32
SNX17-203ENST00000440760 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
SNX17-203ENST00000440760 WFDC10BQ8IUB3 73 aa13.07□□□□□ -0.32
SNX17-203ENST00000440760 GEMIN7Q9H840 131 aaKnown RBP13.07□□□□□ -0.32
SNX17-203ENST00000440760 TMEM223A0PJW6 202 aa13.06□□□□□ -0.32
SNX17-203ENST00000440760 E9PLD3 99 aa13.06□□□□□ -0.32
SNX17-203ENST00000440760 IGLL5B9A064 214 aa13.05□□□□□ -0.32
SNX17-203ENST00000440760 NHLRC4P0CG21 123 aaPredicted RBP13.05□□□□□ -0.32
SNX17-203ENST00000440760 CDKN2A-AS1Q9UH64 79 aa13.05□□□□□ -0.32
SNX17-203ENST00000440760 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
SNX17-203ENST00000440760 HERVK_113P61574 105 aa13.05□□□□□ -0.32
SNX17-203ENST00000440760 TRAV8-3A0A0A6YYJ7 113 aa13.04□□□□□ -0.32
SNX17-203ENST00000440760 ANGP03950 147 aaKnown RBP13.04□□□□□ -0.32
SNX17-203ENST00000440760 SPINK8P0C7L1 97 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms