RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 LECT2O14960 151 aa7.79□□□□□ -1.16
HSPG2-206ENST00000439717 RAB5AP20339 215 aa7.79□□□□□ -1.16
HSPG2-206ENST00000439717 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
HSPG2-206ENST00000439717 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
HSPG2-206ENST00000439717 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
HSPG2-206ENST00000439717 CDC42SE2Q9NRR3 84 aa7.79□□□□□ -1.16
HSPG2-206ENST00000439717 IGLV10-54A0A075B6I4 117 aa7.78□□□□□ -1.16
HSPG2-206ENST00000439717 IGLV5-52A0A0A0MRZ9 124 aa7.78□□□□□ -1.16
HSPG2-206ENST00000439717 MT-ND6P03923 174 aa7.78□□□□□ -1.16
HSPG2-206ENST00000439717 ZNF664Q8N3J9 261 aa7.78□□□□□ -1.16
HSPG2-206ENST00000439717 UBE2D4Q9Y2X8 147 aa7.78□□□□□ -1.16
HSPG2-206ENST00000439717 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
HSPG2-206ENST00000439717 LOC389332A0A1B0GUA5 103 aa7.77□□□□□ -1.17
HSPG2-206ENST00000439717 K7EMI3 77 aa7.77□□□□□ -1.17
HSPG2-206ENST00000439717 GCSHP23434 173 aa7.77□□□□□ -1.17
HSPG2-206ENST00000439717 FUSP35637 526 aaKnown RBP eCLIP7.77□□□□□ -1.17
HSPG2-206ENST00000439717 Q8N8P6 123 aa7.77□□□□□ -1.17
HSPG2-206ENST00000439717 DNAH5Q8TE73 4624 aa7.76□□□□□ -1.17
HSPG2-206ENST00000439717 USP17L23D6RBM5 183 aa7.76□□□□□ -1.17
HSPG2-206ENST00000439717 CDK2AP2O75956 126 aa7.76□□□□□ -1.17
HSPG2-206ENST00000439717 NXT2Q9NPJ8 142 aaKnown RBP7.76□□□□□ -1.17
HSPG2-206ENST00000439717 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
HSPG2-206ENST00000439717 LRP1BQ9NZR2 4599 aa7.75□□□□□ -1.17
HSPG2-206ENST00000439717 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.75□□□□□ -1.17
HSPG2-206ENST00000439717 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
HSPG2-206ENST00000439717 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
HSPG2-206ENST00000439717 CCL25O15444 150 aa7.75□□□□□ -1.17
HSPG2-206ENST00000439717 SS18Q15532 418 aa7.75□□□□□ -1.17
HSPG2-206ENST00000439717 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
HSPG2-206ENST00000439717 SLC7A5P1Q8MH63 180 aa7.75□□□□□ -1.17
HSPG2-206ENST00000439717 CHCHD10Q8WYQ3 142 aaPredicted RBP7.75□□□□□ -1.17
HSPG2-206ENST00000439717 MRPL18Q9H0U6 180 aaKnown RBP7.75□□□□□ -1.17
HSPG2-206ENST00000439717 TGIF2-C20orf24A0A0A6YYL0 155 aa7.74□□□□□ -1.17
HSPG2-206ENST00000439717 RPL39P62891 51 aaKnown RBP7.74□□□□□ -1.17
HSPG2-206ENST00000439717 MRPS36P82909 103 aaKnown RBP7.74□□□□□ -1.17
HSPG2-206ENST00000439717 ORMDL2Q53FV1 153 aa7.74□□□□□ -1.17
HSPG2-206ENST00000439717 ALKBH7Q9BT30 221 aaPredicted RBP7.74□□□□□ -1.17
HSPG2-206ENST00000439717 G0S2P27469 103 aa7.73□□□□□ -1.17
HSPG2-206ENST00000439717 KRTAP10-1P60331 282 aa7.73□□□□□ -1.17
HSPG2-206ENST00000439717 FABP9Q0Z7S8 132 aa7.73□□□□□ -1.17
HSPG2-206ENST00000439717 CFAP161Q6P656 301 aa7.73□□□□□ -1.17
HSPG2-206ENST00000439717 Q6ZUT4 128 aa7.73□□□□□ -1.17
HSPG2-206ENST00000439717 PYGO1Q9Y3Y4 419 aa7.73□□□□□ -1.17
HSPG2-206ENST00000439717 C1orf196B1AJZ1 125 aa7.72□□□□□ -1.17
HSPG2-206ENST00000439717 PRSS1P07477 247 aa7.72□□□□□ -1.17
HSPG2-206ENST00000439717 IFI27P40305 119 aaPredicted RBP7.72□□□□□ -1.17
HSPG2-206ENST00000439717 XCL1P47992 114 aa7.72□□□□□ -1.17
HSPG2-206ENST00000439717 FOXI1Q12951 378 aa7.72□□□□□ -1.17
HSPG2-206ENST00000439717 CD164L2Q6UWJ8 174 aa7.72□□□□□ -1.17
HSPG2-206ENST00000439717 CYSLTR1Q9Y271 337 aa7.72□□□□□ -1.17
HSPG2-206ENST00000439717 TRAPPC1Q9Y5R8 145 aa7.72□□□□□ -1.17
HSPG2-206ENST00000439717 PRSS3P2Q8NHM4 247 aa7.71□□□□□ -1.18
HSPG2-206ENST00000439717 YPEL4Q96NS1 127 aa7.71□□□□□ -1.18
HSPG2-206ENST00000439717 SMCO4Q9NRQ5 59 aa7.71□□□□□ -1.18
HSPG2-206ENST00000439717 hDV102S1A0JD36 115 aa7.7□□□□□ -1.18
HSPG2-206ENST00000439717 LINC01546A6NGU7 62 aa7.7□□□□□ -1.18
HSPG2-206ENST00000439717 NPSP0C0P6 89 aa7.7□□□□□ -1.18
HSPG2-206ENST00000439717 RNASE13Q5GAN3 156 aaKnown RBP7.7□□□□□ -1.18
HSPG2-206ENST00000439717 C2orf66Q6UXQ4 117 aa7.7□□□□□ -1.18
HSPG2-206ENST00000439717 FAM104AQ969W3 186 aa7.7□□□□□ -1.18
HSPG2-206ENST00000439717 TRAV13-1A0A0B4J241 112 aa7.69□□□□□ -1.18
HSPG2-206ENST00000439717 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
HSPG2-206ENST00000439717 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
HSPG2-206ENST00000439717 OPRPNQ99935 248 aaPredicted RBP7.69□□□□□ -1.18
HSPG2-206ENST00000439717 AP5S1Q9NUS5 200 aa7.69□□□□□ -1.18
HSPG2-206ENST00000439717 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
HSPG2-206ENST00000439717 IGHV1-58A0A0C4DH39 117 aa7.68□□□□□ -1.18
HSPG2-206ENST00000439717 LINC01549A6NIU2 74 aa7.68□□□□□ -1.18
HSPG2-206ENST00000439717 IFITM10A6NMD0 228 aa7.68□□□□□ -1.18
HSPG2-206ENST00000439717 TMEM141Q96I45 108 aa7.68□□□□□ -1.18
HSPG2-206ENST00000439717 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
HSPG2-206ENST00000439717 APOBP04114 4563 aaKnown RBP7.67□□□□□ -1.18
HSPG2-206ENST00000439717 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
HSPG2-206ENST00000439717 IGIPA6NJ69 53 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 Q6ZN92 141 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 TEX43Q6ZNM6 134 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 FA2HQ7L5A8 372 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 CBLN2Q8IUK8 224 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 C9orf163Q8N9P6 203 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 TOMM6Q96B49 74 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 HERC2O95714 4834 aa7.67□□□□□ -1.18
HSPG2-206ENST00000439717 HSPG2P98160 4391 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.66□□□□□ -1.18
HSPG2-206ENST00000439717 COX7A2LO14548 114 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 XGP55808 180 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 PAPPA-AS1Q5QFB9 102 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 Q6ZSA8 131 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 TIMM17AQ99595 171 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 C2orf88Q9BSF0 95 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 VCX2Q9H322 139 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 RYR1P21817 5038 aa7.66□□□□□ -1.18
HSPG2-206ENST00000439717 MALP21145 153 aa7.65□□□□□ -1.18
HSPG2-206ENST00000439717 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
HSPG2-206ENST00000439717 HIGD2BQ4VC39 106 aa7.65□□□□□ -1.18
HSPG2-206ENST00000439717 ERASQ7Z444 233 aa7.65□□□□□ -1.18
HSPG2-206ENST00000439717 C18orf32Q8TCD1 76 aa7.65□□□□□ -1.18
HSPG2-206ENST00000439717 AMELXQ99217 191 aa7.65□□□□□ -1.18
HSPG2-206ENST00000439717 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.18
HSPG2-206ENST00000439717 DNAH8Q96JB1 4490 aa7.64□□□□□ -1.19
HSPG2-206ENST00000439717 IGHV3OR16-9A0A0B4J2B5 98 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms