RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 PPP1R17O96001 155 aa7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 PAPPA-AS1Q5QFB9 102 aa7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 SRSF2Q01130 221 aaKnown RBP7.31□□□□□ -1.24
CDC42SE1-202ENST00000439374 PIK3CD-AS1Q5SR53 167 aa7.31□□□□□ -1.24
CDC42SE1-202ENST00000439374 TMEM61Q8N0U2 210 aa7.31□□□□□ -1.24
CDC42SE1-202ENST00000439374 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
CDC42SE1-202ENST00000439374 Q9H8V8 135 aa7.31□□□□□ -1.24
CDC42SE1-202ENST00000439374 RHOHQ15669 191 aa7.31□□□□□ -1.24
CDC42SE1-202ENST00000439374 DCANP1Q8TF63 244 aa7.31□□□□□ -1.24
CDC42SE1-202ENST00000439374 IGLV4-3A0A075B6K6 122 aa7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 PSMG3-AS1Q96PY0 264 aa7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 CDKN2A-AS1Q9UH64 79 aa7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 VPREB3Q9UKI3 123 aa7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 SOCS3O14543 225 aa7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 ATP5G1P05496 136 aa7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 COX8CQ7Z4L0 72 aa7.3□□□□□ -1.24
CDC42SE1-202ENST00000439374 A0A0J9YX75 114 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 TMEM223A0PJW6 202 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 LGALS9O00182 355 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 LEPROTO15243 131 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 RPL35AP18077 110 aaKnown RBP7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 PSMB8P28062 276 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 PRIMA1Q86XR5 153 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 LENEPQ9Y5L5 61 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 M0QXV9 152 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 IGLV1-40P01703 118 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 POLR2KP53803 58 aaKnown RBP7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 SDIM1Q6ZPB5 146 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 LINC00694P0DN24 101 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 PFN2P35080 140 aa7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 HIST1H4AP62805 103 aaKnown RBP7.29□□□□□ -1.24
CDC42SE1-202ENST00000439374 TRGV1A0A0A0MS02 117 aa7.28□□□□□ -1.24
CDC42SE1-202ENST00000439374 C20orf203Q8NBC4 194 aa7.28□□□□□ -1.24
CDC42SE1-202ENST00000439374 TMEM141Q96I45 108 aa7.28□□□□□ -1.24
CDC42SE1-202ENST00000439374 M0QY20 66 aa7.28□□□□□ -1.24
CDC42SE1-202ENST00000439374 SLPIP03973 132 aa7.28□□□□□ -1.24
CDC42SE1-202ENST00000439374 A0A087WVE0 104 aa7.27□□□□□ -1.25
CDC42SE1-202ENST00000439374 WFDC11Q8NEX6 87 aa7.27□□□□□ -1.25
CDC42SE1-202ENST00000439374 YAE1D1Q9NRH1 226 aa7.27□□□□□ -1.25
CDC42SE1-202ENST00000439374 LINC00315P59091 139 aa7.27□□□□□ -1.25
CDC42SE1-202ENST00000439374 CFAP161Q6P656 301 aa7.27□□□□□ -1.25
CDC42SE1-202ENST00000439374 Q8N2B8 174 aa7.27□□□□□ -1.25
CDC42SE1-202ENST00000439374 H3BUA1 57 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 K7EQG2 157 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 Q6ZSN1 163 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 WFDC9Q8NEX5 89 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 TMEM101Q96IK0 257 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 AMELXQ99217 191 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 LINC00467Q9BRT7 94 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 hADV29S1A0JD25 119 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 BAALC-AS2P0C853 105 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 CLPSL2Q6UWE3 100 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 DAZ4Q86SG3 579 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 STHQ8IWL8 128 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 DAZ3Q9NR90 486 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 ATRQ13535 2644 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 APCP25054 2843 aa7.26□□□□□ -1.25
CDC42SE1-202ENST00000439374 KLLNB2CW77 178 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 C19orf54Q5BKX5 351 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 TIMM17AQ99595 171 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 LINC01619G3V211 115 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 IGHV4-31P0DP07 118 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 DSCR9P59020 149 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 WFDC10AQ9H1F0 79 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 LINC01546A6NGU7 62 aa7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 CIRBPQ14011 172 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-202ENST00000439374 K7EMT4 169 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 KIF25-AS1Q9Y6Z4 181 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 IGHV4-4A0A075B6R2 117 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 DNAL4O96015 105 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 RBMY1A1P0DJD3 496 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 RBMY1CP0DJD4 496 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 LINC00158P58513 81 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 RBMY1FQ15415 496 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 ZNF702PQ9H963 129 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 UBR5O95071 2799 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 COX6A2Q02221 97 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 PEMTQ9UBM1 199 aa7.24□□□□□ -1.25
CDC42SE1-202ENST00000439374 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
CDC42SE1-202ENST00000439374 DEFB113Q30KQ7 82 aa7.23□□□□□ -1.25
CDC42SE1-202ENST00000439374 SETXQ7Z333 2677 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-202ENST00000439374 NBPF19A0A087WUL8 3843 aa7.23□□□□□ -1.25
CDC42SE1-202ENST00000439374 A0A096LPF7 62 aa7.23□□□□□ -1.25
CDC42SE1-202ENST00000439374 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
CDC42SE1-202ENST00000439374 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
CDC42SE1-202ENST00000439374 BRI3O95415 125 aa7.22□□□□□ -1.25
CDC42SE1-202ENST00000439374 HERVK_113P63121 156 aa7.22□□□□□ -1.25
CDC42SE1-202ENST00000439374 IGHV1-58A0A0C4DH39 117 aa7.22□□□□□ -1.25
CDC42SE1-202ENST00000439374 PLA2G2AP14555 144 aa7.22□□□□□ -1.25
CDC42SE1-202ENST00000439374 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
CDC42SE1-202ENST00000439374 Q6YL49 198 aa7.21□□□□□ -1.25
CDC42SE1-202ENST00000439374 ZNF843Q8N446 348 aa7.21□□□□□ -1.25
CDC42SE1-202ENST00000439374 SMCR5Q8TEV8 140 aa7.21□□□□□ -1.25
CDC42SE1-202ENST00000439374 PAX4O43316 350 aa7.21□□□□□ -1.26
CDC42SE1-202ENST00000439374 MIAQ16674 131 aa7.21□□□□□ -1.26
CDC42SE1-202ENST00000439374 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms