RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 ICOSQ9Y6W8 199 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 hDV102S1A0JD36 115 aa9.43□□□□□ -0.9
HLA-DPA1-243ENST00000437811 H3BNG1 76 aa9.43□□□□□ -0.9
HLA-DPA1-243ENST00000437811 FGF6P10767 208 aa9.43□□□□□ -0.9
HLA-DPA1-243ENST00000437811 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
HLA-DPA1-243ENST00000437811 Q6ZUT4 128 aa9.43□□□□□ -0.9
HLA-DPA1-243ENST00000437811 SH2D6Q7Z4S9 175 aa9.43□□□□□ -0.9
HLA-DPA1-243ENST00000437811 AMELXQ99217 191 aa9.43□□□□□ -0.9
HLA-DPA1-243ENST00000437811 A0A096LPF7 62 aa9.42□□□□□ -0.9
HLA-DPA1-243ENST00000437811 HSBP1L1C9JCN9 74 aa9.42□□□□□ -0.9
HLA-DPA1-243ENST00000437811 UBE2L6O14933 153 aa9.42□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PLNP26678 52 aa9.42□□□□□ -0.9
HLA-DPA1-243ENST00000437811 VCX2Q9H322 139 aa9.42□□□□□ -0.9
HLA-DPA1-243ENST00000437811 CSDC2Q9Y534 153 aaKnown RBP9.42□□□□□ -0.9
HLA-DPA1-243ENST00000437811 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
HLA-DPA1-243ENST00000437811 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
HLA-DPA1-243ENST00000437811 TSTD3H0UI37 97 aa9.41□□□□□ -0.9
HLA-DPA1-243ENST00000437811 DGAT2L7PQ6IED9 249 aa9.41□□□□□ -0.9
HLA-DPA1-243ENST00000437811 CHCHD5Q9BSY4 110 aa9.41□□□□□ -0.9
HLA-DPA1-243ENST00000437811 IGLV4-69A0A075B6H9 119 aa9.4□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PCP4L1A6NKN8 68 aa9.4□□□□□ -0.9
HLA-DPA1-243ENST00000437811 ZNF25P17030 456 aaPredicted RBP9.4□□□□□ -0.9
HLA-DPA1-243ENST00000437811 GAGE6Q13070 117 aa9.4□□□□□ -0.9
HLA-DPA1-243ENST00000437811 AMMECR1LQ6DCA0 310 aa9.4□□□□□ -0.9
HLA-DPA1-243ENST00000437811 TRAV10A0A0B4J240 114 aa9.39□□□□□ -0.91
HLA-DPA1-243ENST00000437811 ANKRD39Q53RE8 183 aa9.39□□□□□ -0.91
HLA-DPA1-243ENST00000437811 RNASE13Q5GAN3 156 aaKnown RBP9.39□□□□□ -0.91
HLA-DPA1-243ENST00000437811 OR5A1Q8NGJ0 315 aa9.39□□□□□ -0.91
HLA-DPA1-243ENST00000437811 TMEM101Q96IK0 257 aa9.39□□□□□ -0.91
HLA-DPA1-243ENST00000437811 HUWE1Q7Z6Z7 4374 aaKnown RBP9.39□□□□□ -0.91
HLA-DPA1-243ENST00000437811 C11orf86A6NJI1 115 aa9.38□□□□□ -0.91
HLA-DPA1-243ENST00000437811 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
HLA-DPA1-243ENST00000437811 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
HLA-DPA1-243ENST00000437811 STPG4Q8N801 248 aa9.38□□□□□ -0.91
HLA-DPA1-243ENST00000437811 C2orf88Q9BSF0 95 aa9.38□□□□□ -0.91
HLA-DPA1-243ENST00000437811 NHLRC4P0CG21 123 aaPredicted RBP9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 TIRAPP58753 221 aa9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 CDC42SE2Q9NRR3 84 aa9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 TENM3Q9P273 2699 aa9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 DEFA6Q01524 100 aa9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 LELP1Q5T871 98 aa9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 CHAC1Q9BUX1 264 aa9.37□□□□□ -0.91
HLA-DPA1-243ENST00000437811 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
HLA-DPA1-243ENST00000437811 UBE2D1P51668 147 aa9.36□□□□□ -0.91
HLA-DPA1-243ENST00000437811 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
HLA-DPA1-243ENST00000437811 LYPD5Q6UWN5 251 aa9.35□□□□□ -0.91
HLA-DPA1-243ENST00000437811 C14orf144Q96I85 54 aa9.35□□□□□ -0.91
HLA-DPA1-243ENST00000437811 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
HLA-DPA1-243ENST00000437811 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
HLA-DPA1-243ENST00000437811 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
HLA-DPA1-243ENST00000437811 TINCRA0A1B0GVN0 87 aa9.34□□□□□ -0.91
HLA-DPA1-243ENST00000437811 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
HLA-DPA1-243ENST00000437811 DDTP30046 118 aa9.34□□□□□ -0.91
HLA-DPA1-243ENST00000437811 RBX1P62877 108 aa9.34□□□□□ -0.91
HLA-DPA1-243ENST00000437811 DNAH9Q9NYC9 4486 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 COX8AP10176 69 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TCTAP57738 103 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TMEM170BQ5T4T1 132 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 FAM19A3Q7Z5A8 133 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
HLA-DPA1-243ENST00000437811 IGKV2D-26A0A0A0MRZ7 120 aa9.32□□□□□ -0.92
HLA-DPA1-243ENST00000437811 NMUP48645 174 aa9.32□□□□□ -0.92
HLA-DPA1-243ENST00000437811 HERVK_113P61574 105 aa9.32□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TRAV13-1A0A0B4J241 112 aa9.31□□□□□ -0.92
HLA-DPA1-243ENST00000437811 E9PLD3 99 aa9.31□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TNP2Q05952 138 aa9.31□□□□□ -0.92
HLA-DPA1-243ENST00000437811 SLC25A34Q6PIV7 304 aa9.31□□□□□ -0.92
HLA-DPA1-243ENST00000437811 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TRAV8-6A0A0B4J262 113 aa9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TMEM223A0PJW6 202 aa9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 LINC00587B1AMM8 73 aa9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 SEC11AP67812 179 aa9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
HLA-DPA1-243ENST00000437811 HERVK_113P63121 156 aa9.29□□□□□ -0.92
HLA-DPA1-243ENST00000437811 ESRGQ1W209 222 aa9.29□□□□□ -0.92
HLA-DPA1-243ENST00000437811 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
HLA-DPA1-243ENST00000437811 BOD1L2Q8IYS8 172 aa9.29□□□□□ -0.92
HLA-DPA1-243ENST00000437811 DLEU1O43261 78 aa9.28□□□□□ -0.92
HLA-DPA1-243ENST00000437811 HNRNPA3P51991 378 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA1-243ENST00000437811 Q8N3U1 123 aa9.28□□□□□ -0.92
HLA-DPA1-243ENST00000437811 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
HLA-DPA1-243ENST00000437811 IGKV3OR2-268A0A0C4DH90 116 aa9.27□□□□□ -0.93
HLA-DPA1-243ENST00000437811 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
HLA-DPA1-243ENST00000437811 COX6A2Q02221 97 aa9.27□□□□□ -0.93
HLA-DPA1-243ENST00000437811 WFDC10BQ8IUB3 73 aa9.27□□□□□ -0.93
HLA-DPA1-243ENST00000437811 CDKN2A-AS1Q9UH64 79 aa9.27□□□□□ -0.93
HLA-DPA1-243ENST00000437811 LINC00959A0A1B0GUT2 108 aa9.26□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGLL5B9A064 214 aa9.26□□□□□ -0.93
HLA-DPA1-243ENST00000437811 H3BRM9 83 aa9.26□□□□□ -0.93
HLA-DPA1-243ENST00000437811 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
HLA-DPA1-243ENST00000437811 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
HLA-DPA1-243ENST00000437811 LEPROTO15243 131 aa9.25□□□□□ -0.93
HLA-DPA1-243ENST00000437811 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
HLA-DPA1-243ENST00000437811 CCL25O15444 150 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms