RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 TRBV7-7A0A0K0K1E9 115 aa10.84□□□□□ -0.67
CD4-202ENST00000437800 FAM240AA0A1B0GVK7 77 aa10.84□□□□□ -0.67
CD4-202ENST00000437800 M0R2P5 195 aa10.84□□□□□ -0.67
CD4-202ENST00000437800 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
CD4-202ENST00000437800 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
CD4-202ENST00000437800 SMIM9A6NGZ8 99 aa10.84□□□□□ -0.67
CD4-202ENST00000437800 PAPPA-AS1Q5QFB9 102 aa10.84□□□□□ -0.67
CD4-202ENST00000437800 TRAV25A0A0B4J276 109 aa10.83□□□□□ -0.68
CD4-202ENST00000437800 A0A0J9YY99 117 aa10.83□□□□□ -0.68
CD4-202ENST00000437800 A0A1B0GX51 115 aa10.83□□□□□ -0.68
CD4-202ENST00000437800 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
CD4-202ENST00000437800 TRBV6-5A0A0K0K1A5 114 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 IGHV3-30P01768 117 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 IGHV3-30-5P0DP03 117 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 SNRPD3P62318 126 aaKnown RBP10.82□□□□□ -0.68
CD4-202ENST00000437800 ATXN8Q156A1 80 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 DNHD1Q96M86 4753 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 VCYO14598 125 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 SPRY2O43597 315 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 TMEM141Q96I45 108 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 C9orf85Q96MD7 179 aa10.82□□□□□ -0.68
CD4-202ENST00000437800 H3BMM0 161 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 J3KT08 172 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 LINC00694P0DN24 101 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 UBE2WQ96B02 151 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 IMUPQ9GZP8 106 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 A0A0J9YX75 114 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 TIMM17AQ99595 171 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 CHCHD5Q9BSY4 110 aa10.81□□□□□ -0.68
CD4-202ENST00000437800 TRBV27A0A0K0K1C4 114 aa10.8□□□□□ -0.68
CD4-202ENST00000437800 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
CD4-202ENST00000437800 IGIPA6NJ69 53 aa10.8□□□□□ -0.68
CD4-202ENST00000437800 HERVK_113P61574 105 aa10.8□□□□□ -0.68
CD4-202ENST00000437800 LINC01620Q4KN68 170 aa10.8□□□□□ -0.68
CD4-202ENST00000437800 SUMO4Q6EEV6 95 aa10.8□□□□□ -0.68
CD4-202ENST00000437800 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
CD4-202ENST00000437800 IGLV1-51P01701 117 aa10.79□□□□□ -0.68
CD4-202ENST00000437800 TMEM101Q96IK0 257 aa10.79□□□□□ -0.68
CD4-202ENST00000437800 IGHV3-16A0A0C4DH30 117 aa10.79□□□□□ -0.68
CD4-202ENST00000437800 CRYGDP07320 174 aa10.79□□□□□ -0.68
CD4-202ENST00000437800 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
CD4-202ENST00000437800 TRAV12-3A0A0B4J271 114 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 A0A0B4J2C4 111 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 TEX49A0A1B0GTD5 131 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 RPS28P62857 69 aaKnown RBP10.78□□□□□ -0.68
CD4-202ENST00000437800 PMVKQ15126 192 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 NOTCH1P46531 2555 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 TSHBP01222 138 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 IGHV3-33P01772 117 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 C3orf22Q8N5N4 141 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
CD4-202ENST00000437800 ZNF256Q9Y2P7 627 aaPredicted RBP10.78□□□□□ -0.68
CD4-202ENST00000437800 NBEAL1Q6ZS30 2694 aa10.77□□□□□ -0.68
CD4-202ENST00000437800 MGAM2Q2M2H8 2515 aa10.77□□□□□ -0.69
CD4-202ENST00000437800 UQCRQO14949 82 aa10.77□□□□□ -0.69
CD4-202ENST00000437800 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
CD4-202ENST00000437800 IGLV4-69A0A075B6H9 119 aa10.76□□□□□ -0.69
CD4-202ENST00000437800 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
CD4-202ENST00000437800 ATP5G1P05496 136 aa10.76□□□□□ -0.69
CD4-202ENST00000437800 OR13C6PQ8NH95 151 aa10.76□□□□□ -0.69
CD4-202ENST00000437800 RHOHQ15669 191 aa10.76□□□□□ -0.69
CD4-202ENST00000437800 C9orf66Q5T8R8 295 aa10.76□□□□□ -0.69
CD4-202ENST00000437800 WFDC9Q8NEX5 89 aa10.76□□□□□ -0.69
CD4-202ENST00000437800 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 ZNF56Q15929 161 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 JPT2Q9H910 190 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 DNAH3Q8TD57 4116 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 C11orf86A6NJI1 115 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 H3BT86 120 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 DEFB131AP59861 70 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
CD4-202ENST00000437800 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
CD4-202ENST00000437800 LINC00526Q96FQ7 95 aa10.75□□□□□ -0.69
CD4-202ENST00000437800 A0A087WWL8 130 aa10.74□□□□□ -0.69
CD4-202ENST00000437800 F5H697 171 aa10.74□□□□□ -0.69
CD4-202ENST00000437800 M0QY20 66 aa10.74□□□□□ -0.69
CD4-202ENST00000437800 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
CD4-202ENST00000437800 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
CD4-202ENST00000437800 A8MTW9 85 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 IGKV3-20P01619 116 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 HERVK_113P63121 156 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 ZNF876PQ49A33 203 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 EDA2RQ9HAV5 297 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 TRBV30A0A0K0K1B3 111 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 ODF3L2Q3SX64 289 aa10.73□□□□□ -0.69
CD4-202ENST00000437800 TRGV11A0A075B6L2 103 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 LOC107984640A0A0U1RRK4 108 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 KNCNA6PVL3 124 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 ACYP1P07311 99 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 C2orf82Q6UX34 121 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 FAM236AA0A1B0GUQ0 79 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 FAM236BA0A1B0GV22 79 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 A4D1N5 150 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 EMP1P54849 157 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 WFDC10AQ9H1F0 79 aa10.72□□□□□ -0.69
CD4-202ENST00000437800 TRAV12-2A0A075B6T6 113 aa10.71□□□□□ -0.69
CD4-202ENST00000437800 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
CD4-202ENST00000437800 SPINK13Q1W4C9 94 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms