RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 PPP3R2Q96LZ3 170 aa-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 MGST2Q99735 147 aa-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 LINC00470Q9BZP3 86 aa-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 NDUFA4L2Q9NRX3 87 aa-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 WNK3Q9BYP7 1800 aa-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 MAP1BP46821 2468 aaKnown RBP-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 GOLGA4Q13439 2230 aaKnown RBP-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 KDM3BQ7LBC6 1761 aa-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 TNXBP22105 4242 aa-0.37□□□□□ -2.47
USP9YP28-201ENST00000435142 PLXNB2O15031 1838 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 TRBV7-3A0A075B6L6 115 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 FAM25AB3EWG3 89 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 FAM25CB3EWG5 89 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 FAM25GB3EWG6 89 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 APOC3P02656 99 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 CCDC58Q4VC31 144 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 Q56UQ5 140 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 LINC01558Q9Y6Z2 57 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 BCL9LQ86UU0 1499 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 CSPG4Q6UVK1 2322 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 MYO7BQ6PIF6 2116 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 LRRC37A2A6NM11 1700 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 NWD2Q9ULI1 1742 aa-0.38□□□□□ -2.47
USP9YP28-201ENST00000435142 GVINP1Q7Z2Y8 2422 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 FXYD6-FXYD2A0A087WZ82 144 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 IGLC7A0M8Q6 106 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 NDUFA2O43678 99 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 GNG7O60262 68 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 SPANXDQ9BXN6 97 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 DYNLRB1Q9NP97 96 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 MUC12Q9UKN1 5478 aa-0.39□□□□□ -2.47
USP9YP28-201ENST00000435142 PRDM2Q13029 1718 aa-0.4□□□□□ -2.47
USP9YP28-201ENST00000435142 TENM2Q9NT68 2774 aa-0.4□□□□□ -2.47
USP9YP28-201ENST00000435142 LOC285095A0A1B0GVY8 99 aa-0.4□□□□□ -2.47
USP9YP28-201ENST00000435142 K7EQZ3 153 aa-0.4□□□□□ -2.47
USP9YP28-201ENST00000435142 TNFP01375 233 aa-0.4□□□□□ -2.47
USP9YP28-201ENST00000435142 C8orf59Q8N0T1 100 aaPredicted RBP-0.4□□□□□ -2.47
USP9YP28-201ENST00000435142 WNK1Q9H4A3 2382 aa-0.4□□□□□ -2.47
USP9YP28-201ENST00000435142 SHANK2Q9UPX8 1470 aa-0.41□□□□□ -2.47
USP9YP28-201ENST00000435142 ARAP2Q8WZ64 1704 aa-0.41□□□□□ -2.47
USP9YP28-201ENST00000435142 HMGN4O00479 90 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 SSSCA1O60232 199 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 APOC2P02655 101 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 COX6B1P14854 86 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 SPRR1BP22528 89 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 TSLPQ969D9 159 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 SPTA1P02549 2419 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 CHD8Q9HCK8 2581 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 SRRM2Q9UQ35 2752 aaKnown RBP-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 UNC13AQ9UPW8 1703 aa-0.41□□□□□ -2.48
USP9YP28-201ENST00000435142 ATRQ13535 2644 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 MIF4GDA9UHW6 222 aaKnown RBP-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 K7EP13 123 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 SFT2D2O95562 160 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 IFNGP01579 166 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 FGF7P21781 194 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 SPRR2BP35325 72 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 S100A12P80511 92 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 MRPL54Q6P161 138 aaKnown RBP-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 COMMD6Q7Z4G1 85 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 C5orf38Q86SI9 138 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 DEFB123Q8N688 67 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 PRKDCP78527 4128 aaKnown RBP-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 NAIPQ13075 1403 aa-0.42□□□□□ -2.48
USP9YP28-201ENST00000435142 COL6A3P12111 3177 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 SPEF2Q9C093 1822 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 ZNF236Q9UL36 1845 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 BICRAQ9NZM4 1560 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 CPSF1Q10570 1443 aaKnown RBP-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 CATR1Q13166 79 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 MYH8P13535 1937 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 ACANP16112 2415 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 EP300Q09472 2414 aaPredicted RBP-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 URB1O60287 2271 aaKnown RBP-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 LRP1BQ9NZR2 4599 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 WDR7Q9Y4E6 1490 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 PATJQ8NI35 1801 aa-0.43□□□□□ -2.48
USP9YP28-201ENST00000435142 DOCK1Q14185 1865 aa-0.44□□□□□ -2.48
USP9YP28-201ENST00000435142 LOC100130705A0A1B0GUX0 176 aa-0.44□□□□□ -2.48
USP9YP28-201ENST00000435142 MGPP08493 103 aa-0.44□□□□□ -2.48
USP9YP28-201ENST00000435142 TMEM263Q8WUH6 116 aaKnown RBP-0.44□□□□□ -2.48
USP9YP28-201ENST00000435142 TSC22D3Q99576 134 aa-0.44□□□□□ -2.48
USP9YP28-201ENST00000435142 SETXQ7Z333 2677 aaKnown RBP-0.44□□□□□ -2.48
USP9YP28-201ENST00000435142 PAPPAQ13219 1627 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 CHKB-CPT1BH3BT56 60 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 SPINK4O60575 86 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 HMGN1P05114 100 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 MYOZ3Q8TDC0 251 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 C1orf54Q8WWF1 131 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 SPRR4Q96PI1 79 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 NXT2Q9NPJ8 142 aaKnown RBP-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 LINC00474Q9P2X8 69 aa-0.45□□□□□ -2.48
USP9YP28-201ENST00000435142 RIMS1Q86UR5 1692 aaKnown RBP-0.46□□□□□ -2.48
USP9YP28-201ENST00000435142 POLA1P09884 1462 aaPredicted RBP-0.46□□□□□ -2.48
USP9YP28-201ENST00000435142 MBD5Q9P267 1494 aa-0.46□□□□□ -2.48
USP9YP28-201ENST00000435142 IGLC1P0CG04 106 aa-0.46□□□□□ -2.48
USP9YP28-201ENST00000435142 AKAIN1P0CW23 69 aa-0.46□□□□□ -2.48
USP9YP28-201ENST00000435142 WHAMMP3Q1A5X7 153 aa-0.46□□□□□ -2.48
USP9YP28-201ENST00000435142 CDC42SE2Q9NRR3 84 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms