RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 A0A096LNJ9 63 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 NBDYA0A0U1RRE5 68 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 IBA57-AS1B1ANH7 110 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 HBDP02042 147 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 ANGP03950 147 aaKnown RBP8.33□□□□□ -1.08
LINC00339-204ENST00000434233 MRPS36P82909 103 aaKnown RBP8.33□□□□□ -1.08
LINC00339-204ENST00000434233 TTC32Q5I0X7 151 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 ERASQ7Z444 233 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 ZNF664Q8N3J9 261 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 OR5A1Q8NGJ0 315 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 KLK12Q9UKR0 248 aa8.33□□□□□ -1.08
LINC00339-204ENST00000434233 IGIPA6NJ69 53 aa8.32□□□□□ -1.08
LINC00339-204ENST00000434233 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
LINC00339-204ENST00000434233 TMEM141Q96I45 108 aa8.32□□□□□ -1.08
LINC00339-204ENST00000434233 SCGB3A1Q96QR1 104 aa8.32□□□□□ -1.08
LINC00339-204ENST00000434233 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
LINC00339-204ENST00000434233 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
LINC00339-204ENST00000434233 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
LINC00339-204ENST00000434233 Q6ZR54 194 aa8.31□□□□□ -1.08
LINC00339-204ENST00000434233 FAM19A2Q8N3H0 131 aa8.31□□□□□ -1.08
LINC00339-204ENST00000434233 FAM104AQ969W3 186 aa8.31□□□□□ -1.08
LINC00339-204ENST00000434233 PRR34Q9NV39 138 aa8.31□□□□□ -1.08
LINC00339-204ENST00000434233 IGLV4-3A0A075B6K6 122 aa8.3□□□□□ -1.08
LINC00339-204ENST00000434233 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
LINC00339-204ENST00000434233 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
LINC00339-204ENST00000434233 LINC00269Q8N2A0 174 aa8.3□□□□□ -1.08
LINC00339-204ENST00000434233 TRAV8-3A0A0A6YYJ7 113 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
LINC00339-204ENST00000434233 J3QL48 77 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 M0R2N4 97 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 ATP5LO75964 103 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 S100A6P06703 90 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 REG3AQ06141 175 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
LINC00339-204ENST00000434233 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
LINC00339-204ENST00000434233 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 CCL25O15444 150 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 CRPP02741 224 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 MIAQ16674 131 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 Q6ZN92 141 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 Q6ZUT4 128 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 AMELXQ99217 191 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 LYSTQ99698 3801 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 VCX2Q9H322 139 aa8.28□□□□□ -1.08
LINC00339-204ENST00000434233 TEX43Q6ZNM6 134 aa8.27□□□□□ -1.09
LINC00339-204ENST00000434233 PACRGQ96M98 296 aaPredicted RBP8.27□□□□□ -1.09
LINC00339-204ENST00000434233 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
LINC00339-204ENST00000434233 SS18Q15532 418 aa8.26□□□□□ -1.09
LINC00339-204ENST00000434233 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
LINC00339-204ENST00000434233 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
LINC00339-204ENST00000434233 IFI27L1Q96BM0 104 aa8.26□□□□□ -1.09
LINC00339-204ENST00000434233 RMI2Q96E14 147 aa8.26□□□□□ -1.09
LINC00339-204ENST00000434233 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
LINC00339-204ENST00000434233 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 IGKV3OR2-268A0A0C4DH90 116 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 FABP4P15090 132 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
LINC00339-204ENST00000434233 PMVKQ15126 192 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 C6orf223Q8N319 242 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 BAALCQ8WXS3 180 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 TM2D2Q9BX73 214 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
LINC00339-204ENST00000434233 IFITM10A6NMD0 228 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 PRSS1P07477 247 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 C21orf62-AS1Q17RA5 79 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 C1orf134Q5TEV5 83 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 ZC2HC1BQ5TFG8 222 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 CST9LQ9H4G1 147 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 Q9HAA7 133 aa8.24□□□□□ -1.09
LINC00339-204ENST00000434233 TRAV13-1A0A0B4J241 112 aa8.23□□□□□ -1.09
LINC00339-204ENST00000434233 PRSS29PA6NIE9 313 aa8.23□□□□□ -1.09
LINC00339-204ENST00000434233 UBE2D1P51668 147 aa8.23□□□□□ -1.09
LINC00339-204ENST00000434233 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
LINC00339-204ENST00000434233 HIST3H2BBQ8N257 126 aa8.23□□□□□ -1.09
LINC00339-204ENST00000434233 DNAH6Q9C0G6 4158 aa8.22□□□□□ -1.09
LINC00339-204ENST00000434233 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
LINC00339-204ENST00000434233 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
LINC00339-204ENST00000434233 S100A2P29034 98 aa8.22□□□□□ -1.09
LINC00339-204ENST00000434233 KRTAP26-1Q6PEX3 210 aa8.22□□□□□ -1.09
LINC00339-204ENST00000434233 CHCHD10Q8WYQ3 142 aaPredicted RBP8.22□□□□□ -1.09
LINC00339-204ENST00000434233 KMT2AQ03164 3969 aa8.22□□□□□ -1.09
LINC00339-204ENST00000434233 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
LINC00339-204ENST00000434233 SEC11AP67812 179 aa8.21□□□□□ -1.1
LINC00339-204ENST00000434233 LINC00242Q5T6M2 205 aa8.21□□□□□ -1.1
LINC00339-204ENST00000434233 CD164L2Q6UWJ8 174 aa8.21□□□□□ -1.1
LINC00339-204ENST00000434233 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
LINC00339-204ENST00000434233 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.1
LINC00339-204ENST00000434233 SACSQ9NZJ4 4579 aa8.2□□□□□ -1.1
LINC00339-204ENST00000434233 TINCRA0A1B0GVN0 87 aa8.19□□□□□ -1.1
LINC00339-204ENST00000434233 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms