RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 FAM210AQ96ND0 272 aa9.16□□□□□ -0.94
NUP50-209ENST00000432340 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
NUP50-209ENST00000432340 G3V3Q6 166 aa9.15□□□□□ -0.94
NUP50-209ENST00000432340 TSHBP01222 138 aa9.15□□□□□ -0.94
NUP50-209ENST00000432340 SPAG11BQ08648 103 aa9.15□□□□□ -0.94
NUP50-209ENST00000432340 TMEM241Q24JQ0 296 aa9.15□□□□□ -0.94
NUP50-209ENST00000432340 CST9LP1Q5W188 147 aa9.15□□□□□ -0.94
NUP50-209ENST00000432340 MZT2BQ6NZ67 158 aa9.15□□□□□ -0.94
NUP50-209ENST00000432340 XKRY2A2RUG3 117 aa9.14□□□□□ -0.95
NUP50-209ENST00000432340 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.14□□□□□ -0.95
NUP50-209ENST00000432340 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
NUP50-209ENST00000432340 RPL28P46779 137 aaKnown RBP9.14□□□□□ -0.95
NUP50-209ENST00000432340 H2BFSP57053 126 aa9.14□□□□□ -0.95
NUP50-209ENST00000432340 NDUFA1O15239 70 aa9.13□□□□□ -0.95
NUP50-209ENST00000432340 TEX261Q6UWH6 196 aa9.13□□□□□ -0.95
NUP50-209ENST00000432340 OR10D4PQ8NGN7 298 aa9.13□□□□□ -0.95
NUP50-209ENST00000432340 MRAP2Q96G30 205 aa9.13□□□□□ -0.95
NUP50-209ENST00000432340 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
NUP50-209ENST00000432340 LINC00299Q6ZSB3 139 aa9.12□□□□□ -0.95
NUP50-209ENST00000432340 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
NUP50-209ENST00000432340 I3L3M4 83 aa9.11□□□□□ -0.95
NUP50-209ENST00000432340 IGLC6P0CF74 106 aa9.11□□□□□ -0.95
NUP50-209ENST00000432340 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
NUP50-209ENST00000432340 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
NUP50-209ENST00000432340 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
NUP50-209ENST00000432340 ALG5Q9Y673 324 aa9.11□□□□□ -0.95
NUP50-209ENST00000432340 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
NUP50-209ENST00000432340 SMDT1Q9H4I9 107 aa9.1□□□□□ -0.95
NUP50-209ENST00000432340 SDHAF1A6NFY7 115 aa9.09□□□□□ -0.95
NUP50-209ENST00000432340 PMCHP20382 165 aa9.09□□□□□ -0.95
NUP50-209ENST00000432340 A0A1B0GVG6 124 aa9.08□□□□□ -0.96
NUP50-209ENST00000432340 ZNF726P1Q15940 193 aa9.08□□□□□ -0.96
NUP50-209ENST00000432340 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
NUP50-209ENST00000432340 AKR1C8PQ5T2L2 129 aa9.08□□□□□ -0.96
NUP50-209ENST00000432340 MAP1LC3B2A6NCE7 125 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 SSNA1O43805 119 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 PFDN1O60925 122 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 SMIM15Q7Z3B0 74 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 C5orf38Q86SI9 138 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 ENKURQ8TC29 256 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 MAP1LC3BQ9GZQ8 125 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
NUP50-209ENST00000432340 IGKV2D-26A0A0A0MRZ7 120 aa9.06□□□□□ -0.96
NUP50-209ENST00000432340 INMT-MINDY4F8WBC2 141 aa9.06□□□□□ -0.96
NUP50-209ENST00000432340 BORCS7-ASMTA0A0B4J1R7 106 aa9.05□□□□□ -0.96
NUP50-209ENST00000432340 IFNA1P01562 189 aa9.05□□□□□ -0.96
NUP50-209ENST00000432340 CYTL1Q9NRR1 136 aa9.05□□□□□ -0.96
NUP50-209ENST00000432340 TRAV13-1A0A0B4J241 112 aa9.04□□□□□ -0.96
NUP50-209ENST00000432340 C7orf77A4D0Y5 90 aa9.04□□□□□ -0.96
NUP50-209ENST00000432340 TWIST1Q15672 202 aa9.04□□□□□ -0.96
NUP50-209ENST00000432340 ORAOV1Q8WV07 137 aa9.04□□□□□ -0.96
NUP50-209ENST00000432340 LYZL1Q6UWQ5 148 aa9.03□□□□□ -0.96
NUP50-209ENST00000432340 KRTAP7-1Q8IUC3 87 aa9.03□□□□□ -0.96
NUP50-209ENST00000432340 S100ZQ8WXG8 99 aa9.03□□□□□ -0.96
NUP50-209ENST00000432340 CSDC2Q9Y534 153 aaKnown RBP9.03□□□□□ -0.96
NUP50-209ENST00000432340 BCE1O60756 84 aa9.02□□□□□ -0.97
NUP50-209ENST00000432340 PAGE4O60829 102 aa9.02□□□□□ -0.97
NUP50-209ENST00000432340 SPAG11AQ6PDA7 123 aa9.02□□□□□ -0.97
NUP50-209ENST00000432340 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
NUP50-209ENST00000432340 SCO2A0A1W2PP80 73 aa9.01□□□□□ -0.97
NUP50-209ENST00000432340 CTRLP40313 264 aa9.01□□□□□ -0.97
NUP50-209ENST00000432340 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
NUP50-209ENST00000432340 TMUB2Q71RG4 321 aa9.01□□□□□ -0.97
NUP50-209ENST00000432340 C9orf62Q8N4C0 152 aa9.01□□□□□ -0.97
NUP50-209ENST00000432340 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
NUP50-209ENST00000432340 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
NUP50-209ENST00000432340 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
NUP50-209ENST00000432340 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
NUP50-209ENST00000432340 KRTAP4-1Q9BYQ7 146 aa9□□□□□ -0.97
NUP50-209ENST00000432340 TRBV6-5A0A0K0K1A5 114 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 UPK1BO75841 260 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 LINC00242Q5T6M2 205 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 PACRGQ96M98 296 aaPredicted RBP8.99□□□□□ -0.97
NUP50-209ENST00000432340 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 ST20Q9HBF5 79 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 BIN3Q9NQY0 253 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 TMEM242Q9NWH2 141 aa8.99□□□□□ -0.97
NUP50-209ENST00000432340 MT1HP80294 61 aa8.98□□□□□ -0.97
NUP50-209ENST00000432340 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
NUP50-209ENST00000432340 SMIM12Q96EX1 92 aa8.98□□□□□ -0.97
NUP50-209ENST00000432340 RAB19A4D1S5 217 aa8.97□□□□□ -0.97
NUP50-209ENST00000432340 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
NUP50-209ENST00000432340 RPL35P42766 123 aaKnown RBP8.97□□□□□ -0.97
NUP50-209ENST00000432340 IFITM3Q01628 133 aa8.97□□□□□ -0.97
NUP50-209ENST00000432340 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
NUP50-209ENST00000432340 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
NUP50-209ENST00000432340 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
NUP50-209ENST00000432340 RPL7L1Q6DKI1 246 aaKnown RBP8.96□□□□□ -0.98
NUP50-209ENST00000432340 FCER1GP30273 86 aa8.95□□□□□ -0.98
NUP50-209ENST00000432340 C9orf129Q5T035 196 aaKnown RBP8.95□□□□□ -0.98
NUP50-209ENST00000432340 TMEM18Q96B42 140 aa8.95□□□□□ -0.98
NUP50-209ENST00000432340 MARVELD1Q9BSK0 173 aa8.95□□□□□ -0.98
NUP50-209ENST00000432340 TP73-AS1Q9UF72 201 aa8.95□□□□□ -0.98
NUP50-209ENST00000432340 DEFA1P59665 94 aa8.94□□□□□ -0.98
NUP50-209ENST00000432340 KRTAP10-6P60371 365 aaPredicted RBP8.94□□□□□ -0.98
NUP50-209ENST00000432340 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
NUP50-209ENST00000432340 TRBV27A0A0K0K1C4 114 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms