RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 BAALCQ8WXS3 180 aa12.6□□□□□ -0.39
HMGN1-206ENST00000431390 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
HMGN1-206ENST00000431390 IGLV4-3A0A075B6K6 122 aa12.59□□□□□ -0.39
HMGN1-206ENST00000431390 FGF6P10767 208 aa12.58□□□□□ -0.4
HMGN1-206ENST00000431390 LELP1Q5T871 98 aa12.58□□□□□ -0.4
HMGN1-206ENST00000431390 CHCHD5Q9BSY4 110 aa12.58□□□□□ -0.4
HMGN1-206ENST00000431390 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-206ENST00000431390 MRPS36P82909 103 aaKnown RBP12.57□□□□□ -0.4
HMGN1-206ENST00000431390 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
HMGN1-206ENST00000431390 A0A087WX48 190 aa12.56□□□□□ -0.4
HMGN1-206ENST00000431390 PMVKQ15126 192 aa12.56□□□□□ -0.4
HMGN1-206ENST00000431390 DGAT2L7PQ6IED9 249 aa12.56□□□□□ -0.4
HMGN1-206ENST00000431390 CEMP1Q6PRD7 247 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-206ENST00000431390 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
HMGN1-206ENST00000431390 ODF1Q14990 250 aa12.56□□□□□ -0.4
HMGN1-206ENST00000431390 AMMECR1LQ6DCA0 310 aa12.56□□□□□ -0.4
HMGN1-206ENST00000431390 OPRPNQ99935 248 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-206ENST00000431390 GAGE6Q13070 117 aa12.55□□□□□ -0.4
HMGN1-206ENST00000431390 LINC00518Q8N0U6 118 aa12.55□□□□□ -0.4
HMGN1-206ENST00000431390 TMEM101Q96IK0 257 aa12.55□□□□□ -0.4
HMGN1-206ENST00000431390 AMELXQ99217 191 aa12.55□□□□□ -0.4
HMGN1-206ENST00000431390 VCX2Q9H322 139 aa12.55□□□□□ -0.4
HMGN1-206ENST00000431390 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
HMGN1-206ENST00000431390 PKIAP61925 76 aa12.54□□□□□ -0.4
HMGN1-206ENST00000431390 OR5A1Q8NGJ0 315 aa12.54□□□□□ -0.4
HMGN1-206ENST00000431390 CST9LQ9H4G1 147 aa12.54□□□□□ -0.4
HMGN1-206ENST00000431390 TEX43Q6ZNM6 134 aa12.53□□□□□ -0.4
HMGN1-206ENST00000431390 Q6ZUT4 128 aa12.53□□□□□ -0.4
HMGN1-206ENST00000431390 C12orf57Q99622 126 aa12.53□□□□□ -0.4
HMGN1-206ENST00000431390 A0A1B0GUV1 79 aa12.52□□□□□ -0.4
HMGN1-206ENST00000431390 IGLL5B9A064 214 aa12.52□□□□□ -0.4
HMGN1-206ENST00000431390 F8VRH5 84 aa12.52□□□□□ -0.4
HMGN1-206ENST00000431390 PMCHL2Q9BQD1 86 aa12.52□□□□□ -0.4
HMGN1-206ENST00000431390 CDC42SE2Q9NRR3 84 aa12.52□□□□□ -0.4
HMGN1-206ENST00000431390 CHTOPQ9Y3Y2 248 aaKnown RBP12.52□□□□□ -0.4
HMGN1-206ENST00000431390 ZNF664Q8N3J9 261 aa12.52□□□□□ -0.41
HMGN1-206ENST00000431390 MRPL35Q9NZE8 188 aaKnown RBP12.52□□□□□ -0.41
HMGN1-206ENST00000431390 TRAV8-6A0A0B4J262 113 aa12.51□□□□□ -0.41
HMGN1-206ENST00000431390 TMEM262E9PQX1 116 aa12.51□□□□□ -0.41
HMGN1-206ENST00000431390 ESRGQ1W209 222 aa12.51□□□□□ -0.41
HMGN1-206ENST00000431390 ZC2HC1BQ5TFG8 222 aa12.51□□□□□ -0.41
HMGN1-206ENST00000431390 CDPF1Q6NVV7 123 aa12.51□□□□□ -0.41
HMGN1-206ENST00000431390 DPM2O94777 84 aa12.5□□□□□ -0.41
HMGN1-206ENST00000431390 C2orf88Q9BSF0 95 aa12.5□□□□□ -0.41
HMGN1-206ENST00000431390 NUPR2A6NF83 97 aa12.49□□□□□ -0.41
HMGN1-206ENST00000431390 IGKCP01834 107 aa12.49□□□□□ -0.41
HMGN1-206ENST00000431390 PLNP26678 52 aa12.49□□□□□ -0.41
HMGN1-206ENST00000431390 RBX1P62877 108 aa12.49□□□□□ -0.41
HMGN1-206ENST00000431390 KRTAP17-1Q9BYP8 105 aa12.49□□□□□ -0.41
HMGN1-206ENST00000431390 IGLV4-60A0A075B6I1 120 aa12.48□□□□□ -0.41
HMGN1-206ENST00000431390 S100A12P80511 92 aa12.48□□□□□ -0.41
HMGN1-206ENST00000431390 MPV17L2Q567V2 206 aa12.48□□□□□ -0.41
HMGN1-206ENST00000431390 RNASE13Q5GAN3 156 aaKnown RBP12.48□□□□□ -0.41
HMGN1-206ENST00000431390 ATOH7Q8N100 152 aa12.48□□□□□ -0.41
HMGN1-206ENST00000431390 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
HMGN1-206ENST00000431390 KLK5Q9Y337 293 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-206ENST00000431390 VAMP8Q9BV40 100 aa12.46□□□□□ -0.42
HMGN1-206ENST00000431390 TRAV9-2A0A087WT02 112 aa12.45□□□□□ -0.42
HMGN1-206ENST00000431390 IGLC3P0DOY3 106 aa12.45□□□□□ -0.42
HMGN1-206ENST00000431390 UBE2D1P51668 147 aa12.45□□□□□ -0.42
HMGN1-206ENST00000431390 CCL18P55774 89 aa12.45□□□□□ -0.42
HMGN1-206ENST00000431390 NFE4Q86UQ8 179 aa12.45□□□□□ -0.42
HMGN1-206ENST00000431390 TCTAP57738 103 aa12.44□□□□□ -0.42
HMGN1-206ENST00000431390 APLNQ9ULZ1 77 aa12.44□□□□□ -0.42
HMGN1-206ENST00000431390 MRPS16Q9Y3D3 137 aaKnown RBP12.44□□□□□ -0.42
HMGN1-206ENST00000431390 PLECQ15149 4684 aaKnown RBP12.44□□□□□ -0.42
HMGN1-206ENST00000431390 ALMS1Q8TCU4 4167 aa12.44□□□□□ -0.42
HMGN1-206ENST00000431390 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
HMGN1-206ENST00000431390 FAM19A3Q7Z5A8 133 aa12.43□□□□□ -0.42
HMGN1-206ENST00000431390 WFDC10BQ8IUB3 73 aa12.43□□□□□ -0.42
HMGN1-206ENST00000431390 A0A0J9YXV3 536 aa12.43□□□□□ -0.42
HMGN1-206ENST00000431390 C11orf86A6NJI1 115 aa12.43□□□□□ -0.42
HMGN1-206ENST00000431390 CHAC1Q9BUX1 264 aa12.43□□□□□ -0.42
HMGN1-206ENST00000431390 TINCRA0A1B0GVN0 87 aa12.42□□□□□ -0.42
HMGN1-206ENST00000431390 SEC11AP67812 179 aa12.42□□□□□ -0.42
HMGN1-206ENST00000431390 LINC00588Q9Y4M8 146 aa12.42□□□□□ -0.42
HMGN1-206ENST00000431390 hDV102S1A0JD36 115 aa12.41□□□□□ -0.42
HMGN1-206ENST00000431390 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
HMGN1-206ENST00000431390 MAJINQ3KP22 176 aa12.41□□□□□ -0.42
HMGN1-206ENST00000431390 Q8N3U1 123 aa12.41□□□□□ -0.42
HMGN1-206ENST00000431390 PAM16Q9Y3D7 125 aa12.41□□□□□ -0.42
HMGN1-206ENST00000431390 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
HMGN1-206ENST00000431390 LINC01556Q5JQF7 62 aa12.4□□□□□ -0.42
HMGN1-206ENST00000431390 UPK3BQ9BT76 320 aa12.4□□□□□ -0.42
HMGN1-206ENST00000431390 CCL25O15444 150 aa12.39□□□□□ -0.43
HMGN1-206ENST00000431390 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
HMGN1-206ENST00000431390 LINC00242Q5T6M2 205 aa12.39□□□□□ -0.43
HMGN1-206ENST00000431390 HERVK_113P63121 156 aa12.39□□□□□ -0.43
HMGN1-206ENST00000431390 LINC00269Q8N2A0 174 aa12.39□□□□□ -0.43
HMGN1-206ENST00000431390 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
HMGN1-206ENST00000431390 LINC00959A0A1B0GUT2 108 aa12.38□□□□□ -0.43
HMGN1-206ENST00000431390 DNAH10OSP0CZ25 163 aa12.38□□□□□ -0.43
HMGN1-206ENST00000431390 ZNF22P17026 224 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-206ENST00000431390 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
HMGN1-206ENST00000431390 STPG4Q8N801 248 aa12.38□□□□□ -0.43
HMGN1-206ENST00000431390 IGLV5-45A0A087WSX0 123 aa12.37□□□□□ -0.43
HMGN1-206ENST00000431390 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
HMGN1-206ENST00000431390 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
HMGN1-206ENST00000431390 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
HMGN1-206ENST00000431390 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms