RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 COL4A3Q01955 1670 aa9.8□□□□□ -0.84
CDK12-201ENST00000430627 POM121L12Q8N7R1 296 aa9.8□□□□□ -0.84
CDK12-201ENST00000430627 COX6A2Q02221 97 aa9.8□□□□□ -0.84
CDK12-201ENST00000430627 NUP210Q8TEM1 1887 aaPredicted RBP9.8□□□□□ -0.84
CDK12-201ENST00000430627 HELZP42694 1942 aaKnown RBP9.8□□□□□ -0.84
CDK12-201ENST00000430627 K7EN84 100 aa9.79□□□□□ -0.84
CDK12-201ENST00000430627 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
CDK12-201ENST00000430627 CCKP06307 115 aa9.79□□□□□ -0.84
CDK12-201ENST00000430627 CD164L2Q6UWJ8 174 aa9.79□□□□□ -0.84
CDK12-201ENST00000430627 A0A0B4J2C4 111 aa9.78□□□□□ -0.84
CDK12-201ENST00000430627 EML6Q6ZMW3 1958 aa9.78□□□□□ -0.84
CDK12-201ENST00000430627 SPTAN1Q13813 2472 aaKnown RBP9.78□□□□□ -0.84
CDK12-201ENST00000430627 Q8N9L7 120 aa9.78□□□□□ -0.84
CDK12-201ENST00000430627 ODF3Q96PU9 254 aa9.78□□□□□ -0.84
CDK12-201ENST00000430627 SPANXB1Q9NS25 103 aaPredicted RBP9.78□□□□□ -0.84
CDK12-201ENST00000430627 TNRC6AQ8NDV7 1962 aaKnown RBP9.77□□□□□ -0.85
CDK12-201ENST00000430627 NOTCH3Q9UM47 2321 aa9.77□□□□□ -0.85
CDK12-201ENST00000430627 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
CDK12-201ENST00000430627 COL4A4P53420 1690 aaPredicted RBP9.77□□□□□ -0.85
CDK12-201ENST00000430627 C16orf95Q9H693 158 aa9.77□□□□□ -0.85
CDK12-201ENST00000430627 TNCP24821 2201 aa9.76□□□□□ -0.85
CDK12-201ENST00000430627 COX8AP10176 69 aa9.76□□□□□ -0.85
CDK12-201ENST00000430627 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
CDK12-201ENST00000430627 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
CDK12-201ENST00000430627 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
CDK12-201ENST00000430627 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
CDK12-201ENST00000430627 POLR3KQ9Y2Y1 108 aaPredicted RBP9.74□□□□□ -0.85
CDK12-201ENST00000430627 CACNA1HO95180 2353 aa9.74□□□□□ -0.85
CDK12-201ENST00000430627 C6orf99Q4VX62 202 aa9.74□□□□□ -0.85
CDK12-201ENST00000430627 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
CDK12-201ENST00000430627 PDE6GP18545 87 aa9.74□□□□□ -0.85
CDK12-201ENST00000430627 MALRD1Q5VYJ5 2156 aa9.73□□□□□ -0.85
CDK12-201ENST00000430627 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
CDK12-201ENST00000430627 FAM236AA0A1B0GUQ0 79 aa9.73□□□□□ -0.85
CDK12-201ENST00000430627 FAM236BA0A1B0GV22 79 aa9.73□□□□□ -0.85
CDK12-201ENST00000430627 RPL37AP61513 92 aaKnown RBP9.73□□□□□ -0.85
CDK12-201ENST00000430627 PCNX2A6NKB5 2137 aa9.73□□□□□ -0.85
CDK12-201ENST00000430627 DLEU1O43261 78 aa9.73□□□□□ -0.85
CDK12-201ENST00000430627 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
CDK12-201ENST00000430627 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
CDK12-201ENST00000430627 C1orf147Q96MC9 270 aaPredicted RBP9.72□□□□□ -0.85
CDK12-201ENST00000430627 PTPN13Q12923 2485 aa9.72□□□□□ -0.85
CDK12-201ENST00000430627 NOTCH2Q04721 2471 aa9.72□□□□□ -0.85
CDK12-201ENST00000430627 PLXNA2O75051 1894 aa9.71□□□□□ -0.85
CDK12-201ENST00000430627 MED13Q9UHV7 2174 aa9.71□□□□□ -0.86
CDK12-201ENST00000430627 IMUPQ9GZP8 106 aa9.71□□□□□ -0.86
CDK12-201ENST00000430627 CDKN2A-AS1Q9UH64 79 aa9.71□□□□□ -0.86
CDK12-201ENST00000430627 CYSRT1A8MQ03 144 aa9.7□□□□□ -0.86
CDK12-201ENST00000430627 DSCAMO60469 2012 aa9.7□□□□□ -0.86
CDK12-201ENST00000430627 F8W1H4 67 aa9.7□□□□□ -0.86
CDK12-201ENST00000430627 SBSPONQ8IVN8 264 aa9.7□□□□□ -0.86
CDK12-201ENST00000430627 RTL8CO15255 209 aa9.69□□□□□ -0.86
CDK12-201ENST00000430627 HEATR5AQ86XA9 2040 aa9.69□□□□□ -0.86
CDK12-201ENST00000430627 KRTAP27-1Q3LI81 207 aa9.69□□□□□ -0.86
CDK12-201ENST00000430627 TYMSOSQ8TAI1 123 aa9.69□□□□□ -0.86
CDK12-201ENST00000430627 Q9BRP9 147 aa9.69□□□□□ -0.86
CDK12-201ENST00000430627 IGLV1-51P01701 117 aa9.69□□□□□ -0.86
CDK12-201ENST00000430627 PRRC2AP48634 2157 aaKnown RBP9.69□□□□□ -0.86
CDK12-201ENST00000430627 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
CDK12-201ENST00000430627 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
CDK12-201ENST00000430627 DOCK11Q5JSL3 2073 aa9.68□□□□□ -0.86
CDK12-201ENST00000430627 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
CDK12-201ENST00000430627 IBA57-AS1B1ANH7 110 aa9.67□□□□□ -0.86
CDK12-201ENST00000430627 CDIP1Q9H305 208 aa9.67□□□□□ -0.86
CDK12-201ENST00000430627 ZNF80P51504 273 aaPredicted RBP9.67□□□□□ -0.86
CDK12-201ENST00000430627 FAM19A3Q7Z5A8 133 aa9.67□□□□□ -0.86
CDK12-201ENST00000430627 IGKV2D-30A0A075B6S6 120 aa9.66□□□□□ -0.86
CDK12-201ENST00000430627 IGKV2-30P06310 120 aa9.66□□□□□ -0.86
CDK12-201ENST00000430627 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
CDK12-201ENST00000430627 A0A0J9YXY3 114 aa9.66□□□□□ -0.86
CDK12-201ENST00000430627 OBSL1O75147 1896 aa9.66□□□□□ -0.86
CDK12-201ENST00000430627 TIMM17BO60830 172 aa9.65□□□□□ -0.86
CDK12-201ENST00000430627 ZNF73O43830 326 aaPredicted RBP9.65□□□□□ -0.86
CDK12-201ENST00000430627 K7EP34 96 aa9.65□□□□□ -0.87
CDK12-201ENST00000430627 UBE2V1Q13404 147 aa9.65□□□□□ -0.87
CDK12-201ENST00000430627 Q6ZQY7 126 aa9.65□□□□□ -0.87
CDK12-201ENST00000430627 SMR3BP02814 79 aaPredicted RBP9.64□□□□□ -0.87
CDK12-201ENST00000430627 A0A1B0GXF2 115 aa9.64□□□□□ -0.87
CDK12-201ENST00000430627 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
CDK12-201ENST00000430627 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 PRLHP81277 87 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
CDK12-201ENST00000430627 TTTY13Q9BZ97 58 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 TRBV6-5A0A0K0K1A5 114 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 IGLC6P0CF74 106 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
CDK12-201ENST00000430627 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
CDK12-201ENST00000430627 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
CDK12-201ENST00000430627 A8MZ25 164 aa9.61□□□□□ -0.87
CDK12-201ENST00000430627 SERTAD4-AS1Q5TG53 156 aa9.61□□□□□ -0.87
CDK12-201ENST00000430627 C2orf16Q68DN1 1984 aa9.61□□□□□ -0.87
CDK12-201ENST00000430627 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
CDK12-201ENST00000430627 FAM167A-AS1Q96KT0 104 aa9.61□□□□□ -0.87
CDK12-201ENST00000430627 IGLV4-3A0A075B6K6 122 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms