RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TRAV8-4A0A0B4J246 113 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 OOSP1A8MZH6 123 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 ATOX1O00244 68 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 PGLYRP1O75594 196 aaPredicted RBP2.71□□□□□ -1.98
HMGB3-203ENST00000430118 TRACP01848 142 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 IGHG2P01859 326 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 IL4P05112 153 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 GCHFRP30047 84 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 UBE2E1P51965 193 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 HIST1H4AP62805 103 aaKnown RBP2.71□□□□□ -1.98
HMGB3-203ENST00000430118 LY6EQ16553 131 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 TMEM170BQ5T4T1 132 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 PDPNQ86YL7 162 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 C11orf53Q8IXP5 236 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 AMN1Q8IY45 258 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 FAM19A4Q96LR4 140 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 UBE2E2Q96LR5 201 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 CAMK2N2Q96S95 79 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 HDHD3Q9BSH5 251 aaPredicted RBP2.71□□□□□ -1.98
HMGB3-203ENST00000430118 SHANK2-AS3Q9BTD1 123 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 EMC6Q9BV81 110 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 MRPL20Q9BYC9 149 aaKnown RBP2.71□□□□□ -1.98
HMGB3-203ENST00000430118 PLECQ15149 4684 aaKnown RBP2.71□□□□□ -1.98
HMGB3-203ENST00000430118 HECTD4Q9Y4D8 3996 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 FRAS1Q86XX4 4008 aa2.71□□□□□ -1.98
HMGB3-203ENST00000430118 TRBV7-3A0A075B6L6 115 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 TRAV2A0A0B4J234 112 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 TRAV8-2A0A0B4J237 113 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 TRAV13-1A0A0B4J241 112 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 MYMXA0A1B0GTQ4 84 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 FAM236AA0A1B0GUQ0 79 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 FAM236BA0A1B0GV22 79 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 RBAKDNA6NC62 111 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 A6NDX4 124 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 KLLNB2CW77 178 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 H0Y9J4 135 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 SYNGR2O43760 224 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 LHBP01229 141 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 NPYP01303 97 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 IGKCP01834 107 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 IGHV1-8P0DP01 117 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 CTLA4P16410 223 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 FOXA3P55318 350 aaPredicted RBP2.7□□□□□ -1.98
HMGB3-203ENST00000430118 HBBP68871 147 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 Q8N9W7 124 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 IFI27L1Q96BM0 104 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 RNASE7Q9H1E1 156 aaKnown RBP2.7□□□□□ -1.98
HMGB3-203ENST00000430118 LHFPL6Q9Y693 200 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 NUP214P35658 2090 aaPredicted RBP2.7□□□□□ -1.98
HMGB3-203ENST00000430118 TENM2Q9NT68 2774 aa2.7□□□□□ -1.98
HMGB3-203ENST00000430118 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 TRBV25-1A0A075B6N4 114 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 TRAV12-2A0A075B6T6 113 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 IGHV3OR15-7A0A075B7D8 119 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 FAM236DA0A1B0GTK5 79 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 UBE2L5PA0A1B0GUS4 154 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 M0R1W7 72 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 LGALS9O00182 355 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 NDUFB3O43676 98 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 ZNF861PO60384 105 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 CD7P09564 240 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 FAM236CP0DP71 79 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 ZNF32P17041 273 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 CCL1P22362 96 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 UBE2D1P51668 147 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 MRPS36P82909 103 aaKnown RBP2.69□□□□□ -1.98
HMGB3-203ENST00000430118 Q6ZQT7 251 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 Q8N2B8 174 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 C15orf56Q8N910 161 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 ARHGAP5-AS1Q96IT6 56 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 IGF2BP2-AS1Q96M15 143 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 TRGV9Q99603 122 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 MGST2Q99735 147 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 NPCDR1Q9BY65 106 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 AGPAT4-IT1Q9H0P7 198 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 PSENENQ9NZ42 101 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 EPDR1Q9UM22 224 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 SERP1Q9Y6X1 66 aa2.69□□□□□ -1.98
HMGB3-203ENST00000430118 A0A0U1RQV1 116 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 A0A1B0GWA3 101 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 C19orf71A6NCJ1 209 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 H3BT86 120 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 K7ERJ3 54 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 PSPHP1O15172 72 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 SLC25A20O43772 301 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 PYYP10082 97 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 MGST1P10620 155 aaKnown RBP2.68□□□□□ -1.98
HMGB3-203ENST00000430118 SP6Q3SY56 376 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 VMA21Q3ZAQ7 101 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 CENPWQ5EE01 88 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 FAM201AQ5SY85 155 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 C10orf128Q5T292 105 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 SDIM1Q6ZPB5 146 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 Q6ZRU5 148 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 C5orf38Q86SI9 138 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 LINC00643Q86TS7 51 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 DRAM1Q8N682 238 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 ZNF414Q96IQ9 312 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms