RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 GCSHP23434 173 aa11.21□□□□□ -0.61
UBE3D-204ENST00000430071 LAGE3Q14657 143 aa11.21□□□□□ -0.61
UBE3D-204ENST00000430071 Q8N8P6 123 aa11.21□□□□□ -0.61
UBE3D-204ENST00000430071 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
UBE3D-204ENST00000430071 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.61
UBE3D-204ENST00000430071 A0A1B0GUV1 79 aa11.2□□□□□ -0.62
UBE3D-204ENST00000430071 COLCA2A8K830 154 aa11.2□□□□□ -0.62
UBE3D-204ENST00000430071 H7C423 109 aa11.2□□□□□ -0.62
UBE3D-204ENST00000430071 FGF6P10767 208 aa11.2□□□□□ -0.62
UBE3D-204ENST00000430071 Q8N814 137 aa11.2□□□□□ -0.62
UBE3D-204ENST00000430071 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
UBE3D-204ENST00000430071 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
UBE3D-204ENST00000430071 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
UBE3D-204ENST00000430071 IGLV5-52A0A0A0MRZ9 124 aa11.18□□□□□ -0.62
UBE3D-204ENST00000430071 SMR3BP02814 79 aaPredicted RBP11.18□□□□□ -0.62
UBE3D-204ENST00000430071 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
UBE3D-204ENST00000430071 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
UBE3D-204ENST00000430071 MRPL52Q86TS9 123 aaKnown RBP11.18□□□□□ -0.62
UBE3D-204ENST00000430071 FAM30AQ9NZY2 134 aa11.18□□□□□ -0.62
UBE3D-204ENST00000430071 RAB5AP20339 215 aa11.17□□□□□ -0.62
UBE3D-204ENST00000430071 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
UBE3D-204ENST00000430071 RNASEKQ6P5S7 137 aaKnown RBP11.17□□□□□ -0.62
UBE3D-204ENST00000430071 CLPSL2Q6UWE3 100 aa11.17□□□□□ -0.62
UBE3D-204ENST00000430071 LINC00269Q8N2A0 174 aa11.17□□□□□ -0.62
UBE3D-204ENST00000430071 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
UBE3D-204ENST00000430071 PRR34Q9NV39 138 aa11.17□□□□□ -0.62
UBE3D-204ENST00000430071 SRRM2Q9UQ35 2752 aaKnown RBP11.17□□□□□ -0.62
UBE3D-204ENST00000430071 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
UBE3D-204ENST00000430071 S100A1P23297 94 aa11.16□□□□□ -0.62
UBE3D-204ENST00000430071 BAALCQ8WXS3 180 aa11.16□□□□□ -0.62
UBE3D-204ENST00000430071 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
UBE3D-204ENST00000430071 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
UBE3D-204ENST00000430071 C18orf32Q8TCD1 76 aa11.16□□□□□ -0.62
UBE3D-204ENST00000430071 UBE2D4Q9Y2X8 147 aa11.16□□□□□ -0.62
UBE3D-204ENST00000430071 EPM2AB3EWF7 344 aa11.15□□□□□ -0.63
UBE3D-204ENST00000430071 CRPP02741 224 aa11.15□□□□□ -0.63
UBE3D-204ENST00000430071 REG3AQ06141 175 aa11.15□□□□□ -0.63
UBE3D-204ENST00000430071 OR5A1Q8NGJ0 315 aa11.15□□□□□ -0.63
UBE3D-204ENST00000430071 TM2D2Q9BX73 214 aa11.15□□□□□ -0.63
UBE3D-204ENST00000430071 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.14□□□□□ -0.63
UBE3D-204ENST00000430071 K7EMI3 77 aa11.14□□□□□ -0.63
UBE3D-204ENST00000430071 TRGC2P03986 189 aa11.14□□□□□ -0.63
UBE3D-204ENST00000430071 Q0VG73 95 aa11.14□□□□□ -0.63
UBE3D-204ENST00000430071 LINC01620Q4KN68 170 aa11.14□□□□□ -0.63
UBE3D-204ENST00000430071 NTN5Q8WTR8 489 aaPredicted RBP11.14□□□□□ -0.63
UBE3D-204ENST00000430071 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
UBE3D-204ENST00000430071 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
UBE3D-204ENST00000430071 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
UBE3D-204ENST00000430071 LINC01546A6NGU7 62 aa11.13□□□□□ -0.63
UBE3D-204ENST00000430071 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
UBE3D-204ENST00000430071 Q5VSD8 79 aa11.13□□□□□ -0.63
UBE3D-204ENST00000430071 TMEM18Q96B42 140 aa11.13□□□□□ -0.63
UBE3D-204ENST00000430071 URB1-AS1Q96HZ7 61 aa11.13□□□□□ -0.63
UBE3D-204ENST00000430071 CDC42SE2Q9NRR3 84 aa11.13□□□□□ -0.63
UBE3D-204ENST00000430071 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
UBE3D-204ENST00000430071 MIAQ16674 131 aa11.12□□□□□ -0.63
UBE3D-204ENST00000430071 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
UBE3D-204ENST00000430071 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
UBE3D-204ENST00000430071 Q6ZUT4 128 aa11.11□□□□□ -0.63
UBE3D-204ENST00000430071 FA2HQ7L5A8 372 aa11.11□□□□□ -0.63
UBE3D-204ENST00000430071 ZNF664Q8N3J9 261 aa11.11□□□□□ -0.63
UBE3D-204ENST00000430071 IGLV10-54A0A075B6I4 117 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 RNASE13Q5GAN3 156 aaKnown RBP11.1□□□□□ -0.63
UBE3D-204ENST00000430071 KRTAP26-1Q6PEX3 210 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 RMI2Q96E14 147 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
UBE3D-204ENST00000430071 C1orf43Q9BWL3 253 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 SPANXA1Q9NS26 97 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
UBE3D-204ENST00000430071 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.64
UBE3D-204ENST00000430071 COX11Q9Y6N1 276 aa11.08□□□□□ -0.64
UBE3D-204ENST00000430071 TRAV8-4A0A0B4J246 113 aa11.07□□□□□ -0.64
UBE3D-204ENST00000430071 LINC00614P0C842 121 aa11.07□□□□□ -0.64
UBE3D-204ENST00000430071 INAFM2P0DMQ5 153 aa11.07□□□□□ -0.64
UBE3D-204ENST00000430071 MRPS36P82909 103 aaKnown RBP11.07□□□□□ -0.64
UBE3D-204ENST00000430071 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
UBE3D-204ENST00000430071 IGLV4-3A0A075B6K6 122 aa11.06□□□□□ -0.64
UBE3D-204ENST00000430071 LINC00959A0A1B0GUT2 108 aa11.06□□□□□ -0.64
UBE3D-204ENST00000430071 TOMM6Q96B49 74 aa11.06□□□□□ -0.64
UBE3D-204ENST00000430071 IGIPA6NJ69 53 aa11.05□□□□□ -0.64
UBE3D-204ENST00000430071 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
UBE3D-204ENST00000430071 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
UBE3D-204ENST00000430071 A0A096LNJ9 63 aa11.04□□□□□ -0.64
UBE3D-204ENST00000430071 G0S2P27469 103 aa11.04□□□□□ -0.64
UBE3D-204ENST00000430071 RAB5BP61020 215 aa11.04□□□□□ -0.64
UBE3D-204ENST00000430071 Q6ZSA8 131 aa11.04□□□□□ -0.64
UBE3D-204ENST00000430071 CHCHD10Q8WYQ3 142 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-204ENST00000430071 HERC1Q15751 4861 aa11.03□□□□□ -0.64
UBE3D-204ENST00000430071 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
UBE3D-204ENST00000430071 PMCHL1Q16048 86 aa11.03□□□□□ -0.64
UBE3D-204ENST00000430071 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
UBE3D-204ENST00000430071 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 CCL25O15444 150 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 XCL1P47992 114 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 LINC00310P59036 64 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 SS18Q15532 418 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms