RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 GAGE6Q13070 117 aa15.38■□□□□ 0.05
VSX1-205ENST00000429762 HUWE1Q7Z6Z7 4374 aaKnown RBP15.38■□□□□ 0.05
VSX1-205ENST00000429762 TRBV6-8A0A0A6YYG3 113 aa15.38■□□□□ 0.05
VSX1-205ENST00000429762 UQCR10Q9UDW1 63 aa15.38■□□□□ 0.05
VSX1-205ENST00000429762 IGKV2D-26A0A0A0MRZ7 120 aa15.37■□□□□ 0.05
VSX1-205ENST00000429762 UBE2L6O14933 153 aa15.37■□□□□ 0.05
VSX1-205ENST00000429762 DGAT2L7PQ6IED9 249 aa15.37■□□□□ 0.05
VSX1-205ENST00000429762 AMELXQ99217 191 aa15.37■□□□□ 0.05
VSX1-205ENST00000429762 NMUP48645 174 aa15.36■□□□□ 0.05
VSX1-205ENST00000429762 A0A0J9YXV3 536 aa15.36■□□□□ 0.05
VSX1-205ENST00000429762 CHCHD5Q9BSY4 110 aa15.35■□□□□ 0.05
VSX1-205ENST00000429762 TTTY13Q9BZ97 58 aa15.35■□□□□ 0.05
VSX1-205ENST00000429762 AMMECR1LQ6DCA0 310 aa15.34■□□□□ 0.05
VSX1-205ENST00000429762 C11orf45Q8TAV5 145 aa15.34■□□□□ 0.05
VSX1-205ENST00000429762 TIMM21Q9BVV7 248 aa15.34■□□□□ 0.05
VSX1-205ENST00000429762 PAPPA-AS1Q5QFB9 102 aa15.33■□□□□ 0.05
VSX1-205ENST00000429762 PCP2Q8IVA1 136 aa15.33■□□□□ 0.05
VSX1-205ENST00000429762 CHAC1Q9BUX1 264 aa15.33■□□□□ 0.05
VSX1-205ENST00000429762 MRPL52Q86TS9 123 aaKnown RBP15.33■□□□□ 0.04
VSX1-205ENST00000429762 COX8AP10176 69 aa15.32■□□□□ 0.04
VSX1-205ENST00000429762 HNRNPA3P51991 378 aaKnown RBP15.31■□□□□ 0.04
VSX1-205ENST00000429762 MRPS36P82909 103 aaKnown RBP15.31■□□□□ 0.04
VSX1-205ENST00000429762 TMEM170BQ5T4T1 132 aa15.31■□□□□ 0.04
VSX1-205ENST00000429762 SLC25A34Q6PIV7 304 aa15.31■□□□□ 0.04
VSX1-205ENST00000429762 OR5A1Q8NGJ0 315 aa15.31■□□□□ 0.04
VSX1-205ENST00000429762 ICOSQ9Y6W8 199 aa15.31■□□□□ 0.04
VSX1-205ENST00000429762 NPSP0C0P6 89 aa15.3■□□□□ 0.04
VSX1-205ENST00000429762 DEFA6Q01524 100 aa15.3■□□□□ 0.04
VSX1-205ENST00000429762 IGLV4-60A0A075B6I1 120 aa15.29■□□□□ 0.04
VSX1-205ENST00000429762 CTAG1AP78358 180 aa15.29■□□□□ 0.04
VSX1-205ENST00000429762 TMEM97Q5BJF2 176 aa15.29■□□□□ 0.04
VSX1-205ENST00000429762 NFE4Q86UQ8 179 aa15.29■□□□□ 0.04
VSX1-205ENST00000429762 MRPL23Q16540 153 aaKnown RBP15.29■□□□□ 0.04
VSX1-205ENST00000429762 TMEM101Q96IK0 257 aa15.29■□□□□ 0.04
VSX1-205ENST00000429762 C2orf88Q9BSF0 95 aa15.29■□□□□ 0.04
VSX1-205ENST00000429762 CDC42SE2Q9NRR3 84 aa15.29■□□□□ 0.04
VSX1-205ENST00000429762 ZNF22P17026 224 aaPredicted RBP15.27■□□□□ 0.04
VSX1-205ENST00000429762 CSDC2Q9Y534 153 aaKnown RBP15.27■□□□□ 0.04
VSX1-205ENST00000429762 TMEM262E9PQX1 116 aa15.27■□□□□ 0.03
VSX1-205ENST00000429762 UBE2D1P51668 147 aa15.27■□□□□ 0.03
VSX1-205ENST00000429762 DEFB131BA0A096LNP1 70 aa15.26■□□□□ 0.03
VSX1-205ENST00000429762 TRAV13-1A0A0B4J241 112 aa15.26■□□□□ 0.03
VSX1-205ENST00000429762 TRAV8-6A0A0B4J262 113 aa15.26■□□□□ 0.03
VSX1-205ENST00000429762 H7C423 109 aa15.26■□□□□ 0.03
VSX1-205ENST00000429762 DNAH9Q9NYC9 4486 aa15.26■□□□□ 0.03
VSX1-205ENST00000429762 IGHV3-64A0A075B6Q5 118 aa15.25■□□□□ 0.03
VSX1-205ENST00000429762 IGKV3OR2-268A0A0C4DH90 116 aa15.25■□□□□ 0.03
VSX1-205ENST00000429762 MAPKAPK5-AS1Q8N8E1 139 aa15.25■□□□□ 0.03
VSX1-205ENST00000429762 BOD1L2Q8IYS8 172 aa15.25■□□□□ 0.03
VSX1-205ENST00000429762 Q8N3U1 123 aa15.25■□□□□ 0.03
VSX1-205ENST00000429762 SMAGPQ0VAQ4 97 aa15.24■□□□□ 0.03
VSX1-205ENST00000429762 MPV17L2Q567V2 206 aa15.24■□□□□ 0.03
VSX1-205ENST00000429762 E9PLD3 99 aa15.23■□□□□ 0.03
VSX1-205ENST00000429762 EREGO14944 169 aa15.23■□□□□ 0.03
VSX1-205ENST00000429762 COX6A2Q02221 97 aa15.23■□□□□ 0.03
VSX1-205ENST00000429762 C2orf91Q6ZV80 131 aa15.23■□□□□ 0.03
VSX1-205ENST00000429762 ZNF25P17030 456 aaPredicted RBP15.22■□□□□ 0.03
VSX1-205ENST00000429762 TINCRA0A1B0GVN0 87 aa15.22■□□□□ 0.03
VSX1-205ENST00000429762 TMEM223A0PJW6 202 aa15.22■□□□□ 0.03
VSX1-205ENST00000429762 RBX1P62877 108 aa15.22■□□□□ 0.03
VSX1-205ENST00000429762 TSPEAR-AS2P59090 65 aa15.21■□□□□ 0.03
VSX1-205ENST00000429762 HERVK_113P61574 105 aa15.21■□□□□ 0.03
VSX1-205ENST00000429762 LINC00469Q8N7U9 141 aa15.21■□□□□ 0.03
VSX1-205ENST00000429762 LINC00242Q5T6M2 205 aa15.2■□□□□ 0.02
VSX1-205ENST00000429762 GEMIN7Q9H840 131 aaKnown RBP15.2■□□□□ 0.02
VSX1-205ENST00000429762 CLPSL2Q6UWE3 100 aa15.2■□□□□ 0.02
VSX1-205ENST00000429762 LYPD5Q6UWN5 251 aa15.2■□□□□ 0.02
VSX1-205ENST00000429762 B9D2Q9BPU9 175 aa15.2■□□□□ 0.02
VSX1-205ENST00000429762 SNHG12Q9BXW3 62 aa15.2■□□□□ 0.02
VSX1-205ENST00000429762 BATFQ16520 125 aa15.19■□□□□ 0.02
VSX1-205ENST00000429762 SPINK8P0C7L1 97 aa15.18■□□□□ 0.02
VSX1-205ENST00000429762 SH2D6Q7Z4S9 175 aa15.18■□□□□ 0.02
VSX1-205ENST00000429762 CDKN2A-AS1Q9UH64 79 aa15.18■□□□□ 0.02
VSX1-205ENST00000429762 MRPS16Q9Y3D3 137 aaKnown RBP15.18■□□□□ 0.02
VSX1-205ENST00000429762 TRAV8-3A0A0A6YYJ7 113 aa15.18■□□□□ 0.02
VSX1-205ENST00000429762 LELP1Q5T871 98 aa15.18■□□□□ 0.02
VSX1-205ENST00000429762 COL7A1Q02388 2944 aa15.18■□□□□ 0.02
VSX1-205ENST00000429762 H3BNG1 76 aa15.17■□□□□ 0.02
VSX1-205ENST00000429762 DLEU1O43261 78 aa15.16■□□□□ 0.02
VSX1-205ENST00000429762 TRAV10A0A0B4J240 114 aa15.16■□□□□ 0.02
VSX1-205ENST00000429762 HINT1P49773 126 aaPredicted RBP15.16■□□□□ 0.02
VSX1-205ENST00000429762 TIRAPP58753 221 aa15.15■□□□□ 0.02
VSX1-205ENST00000429762 MYMXA0A1B0GTQ4 84 aa15.14■□□□□ 0.01
VSX1-205ENST00000429762 A0A1B0GUV1 79 aa15.14■□□□□ 0.01
VSX1-205ENST00000429762 ZNF815PA8K554 130 aa15.14■□□□□ 0.01
VSX1-205ENST00000429762 M0R143 59 aa15.14■□□□□ 0.01
VSX1-205ENST00000429762 LEPROTO15243 131 aa15.13■□□□□ 0.01
VSX1-205ENST00000429762 IGLV5-45A0A087WSX0 123 aa15.13■□□□□ 0.01
VSX1-205ENST00000429762 J3QQQ9 107 aa15.13■□□□□ 0.01
VSX1-205ENST00000429762 HERVK_113P63121 156 aa15.13■□□□□ 0.01
VSX1-205ENST00000429762 FAM19A3Q7Z5A8 133 aa15.13■□□□□ 0.01
VSX1-205ENST00000429762 PLEKHB2Q96CS7 222 aa15.13■□□□□ 0.01
VSX1-205ENST00000429762 ESRGQ1W209 222 aa15.12■□□□□ 0.01
VSX1-205ENST00000429762 ANGP03950 147 aaKnown RBP15.11■□□□□ 0.01
VSX1-205ENST00000429762 IGHV3-30-3P0DP02 117 aa15.11■□□□□ 0.01
VSX1-205ENST00000429762 LINC00269Q8N2A0 174 aa15.11■□□□□ 0.01
VSX1-205ENST00000429762 LINC00959A0A1B0GUT2 108 aa15.11■□□□□ 0.01
VSX1-205ENST00000429762 LGALS3P17931 250 aaKnown RBP15.11■□□□□ 0.01
VSX1-205ENST00000429762 KRTAP21-3Q3LHN1 58 aa15.11■□□□□ 0.01
VSX1-205ENST00000429762 WFDC10BQ8IUB3 73 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms