RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TNP2Q05952 138 aa9.97□□□□□ -0.81
GARNL3-204ENST00000429629 PRSS3P2Q8NHM4 247 aa9.97□□□□□ -0.81
GARNL3-204ENST00000429629 Q9HAA7 133 aa9.97□□□□□ -0.81
GARNL3-204ENST00000429629 SPANXA1Q9NS26 97 aa9.97□□□□□ -0.81
GARNL3-204ENST00000429629 A0A1B0GVY2 172 aa9.96□□□□□ -0.82
GARNL3-204ENST00000429629 MRPS36P82909 103 aaKnown RBP9.96□□□□□ -0.82
GARNL3-204ENST00000429629 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.82
GARNL3-204ENST00000429629 ZNF664Q8N3J9 261 aa9.96□□□□□ -0.82
GARNL3-204ENST00000429629 C1orf43Q9BWL3 253 aa9.96□□□□□ -0.82
GARNL3-204ENST00000429629 PSCAO43653 123 aa9.95□□□□□ -0.82
GARNL3-204ENST00000429629 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
GARNL3-204ENST00000429629 IGKV2D-24A0A075B6R9 120 aa9.94□□□□□ -0.82
GARNL3-204ENST00000429629 LRCOL1A6NCL2 159 aa9.94□□□□□ -0.82
GARNL3-204ENST00000429629 EREGO14944 169 aa9.94□□□□□ -0.82
GARNL3-204ENST00000429629 KRTAP26-1Q6PEX3 210 aa9.94□□□□□ -0.82
GARNL3-204ENST00000429629 A0A087WTM6 91 aa9.93□□□□□ -0.82
GARNL3-204ENST00000429629 RAB5BP61020 215 aa9.93□□□□□ -0.82
GARNL3-204ENST00000429629 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
GARNL3-204ENST00000429629 CYSLTR1Q9Y271 337 aa9.93□□□□□ -0.82
GARNL3-204ENST00000429629 LINC00614P0C842 121 aa9.92□□□□□ -0.82
GARNL3-204ENST00000429629 RPL39P62891 51 aaKnown RBP9.92□□□□□ -0.82
GARNL3-204ENST00000429629 C2orf66Q6UXQ4 117 aa9.92□□□□□ -0.82
GARNL3-204ENST00000429629 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
GARNL3-204ENST00000429629 FA2HQ7L5A8 372 aa9.91□□□□□ -0.82
GARNL3-204ENST00000429629 MAPKAPK5-AS1Q8N8E1 139 aa9.91□□□□□ -0.82
GARNL3-204ENST00000429629 FAM104AQ969W3 186 aa9.91□□□□□ -0.82
GARNL3-204ENST00000429629 TOMM6Q96B49 74 aa9.91□□□□□ -0.82
GARNL3-204ENST00000429629 AP5S1Q9NUS5 200 aa9.91□□□□□ -0.82
GARNL3-204ENST00000429629 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.82
GARNL3-204ENST00000429629 IGIPA6NJ69 53 aa9.9□□□□□ -0.82
GARNL3-204ENST00000429629 C1orf196B1AJZ1 125 aa9.9□□□□□ -0.82
GARNL3-204ENST00000429629 TRGC2P03986 189 aa9.9□□□□□ -0.82
GARNL3-204ENST00000429629 PAPPA-AS1Q5QFB9 102 aa9.9□□□□□ -0.82
GARNL3-204ENST00000429629 SS18Q15532 418 aa9.89□□□□□ -0.83
GARNL3-204ENST00000429629 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
GARNL3-204ENST00000429629 ERASQ7Z444 233 aa9.89□□□□□ -0.83
GARNL3-204ENST00000429629 TIMM17AQ99595 171 aa9.89□□□□□ -0.83
GARNL3-204ENST00000429629 PKD1P98161 4303 aa9.88□□□□□ -0.83
GARNL3-204ENST00000429629 ATP6V1G1O75348 118 aa9.88□□□□□ -0.83
GARNL3-204ENST00000429629 C14orf177Q52M58 125 aa9.88□□□□□ -0.83
GARNL3-204ENST00000429629 CDPF1Q6NVV7 123 aa9.88□□□□□ -0.83
GARNL3-204ENST00000429629 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-204ENST00000429629 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-204ENST00000429629 CHCHD1Q96BP2 118 aaKnown RBP9.88□□□□□ -0.83
GARNL3-204ENST00000429629 TMEM141Q96I45 108 aa9.88□□□□□ -0.83
GARNL3-204ENST00000429629 DNAH11Q96DT5 4516 aa9.88□□□□□ -0.83
GARNL3-204ENST00000429629 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
GARNL3-204ENST00000429629 SCO1O75880 301 aa9.87□□□□□ -0.83
GARNL3-204ENST00000429629 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
GARNL3-204ENST00000429629 Q6ZUT4 128 aa9.87□□□□□ -0.83
GARNL3-204ENST00000429629 URB1-AS1Q96HZ7 61 aa9.87□□□□□ -0.83
GARNL3-204ENST00000429629 HECTD4Q9Y4D8 3996 aa9.86□□□□□ -0.83
GARNL3-204ENST00000429629 IGLV10-54A0A075B6I4 117 aa9.86□□□□□ -0.83
GARNL3-204ENST00000429629 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
GARNL3-204ENST00000429629 Q6ZN92 141 aa9.86□□□□□ -0.83
GARNL3-204ENST00000429629 Q8N814 137 aa9.86□□□□□ -0.83
GARNL3-204ENST00000429629 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
GARNL3-204ENST00000429629 AMELXQ99217 191 aa9.86□□□□□ -0.83
GARNL3-204ENST00000429629 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
GARNL3-204ENST00000429629 VCX2Q9H322 139 aa9.85□□□□□ -0.83
GARNL3-204ENST00000429629 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
GARNL3-204ENST00000429629 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
GARNL3-204ENST00000429629 FOXI1Q12951 378 aa9.84□□□□□ -0.83
GARNL3-204ENST00000429629 TEX43Q6ZNM6 134 aa9.84□□□□□ -0.83
GARNL3-204ENST00000429629 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-204ENST00000429629 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
GARNL3-204ENST00000429629 HBDP02042 147 aa9.83□□□□□ -0.84
GARNL3-204ENST00000429629 LCE2DQ5TA82 110 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-204ENST00000429629 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
GARNL3-204ENST00000429629 SPATA12Q7Z6I5 190 aa9.83□□□□□ -0.84
GARNL3-204ENST00000429629 C2orf88Q9BSF0 95 aa9.83□□□□□ -0.84
GARNL3-204ENST00000429629 EPPK1P58107 5090 aaKnown RBP9.82□□□□□ -0.84
GARNL3-204ENST00000429629 A0A096LNJ9 63 aa9.82□□□□□ -0.84
GARNL3-204ENST00000429629 IFITM10A6NMD0 228 aa9.82□□□□□ -0.84
GARNL3-204ENST00000429629 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
GARNL3-204ENST00000429629 XCL1P47992 114 aa9.82□□□□□ -0.84
GARNL3-204ENST00000429629 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
GARNL3-204ENST00000429629 WFDC2Q14508 124 aa9.82□□□□□ -0.84
GARNL3-204ENST00000429629 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
GARNL3-204ENST00000429629 UBE2D1P51668 147 aa9.81□□□□□ -0.84
GARNL3-204ENST00000429629 SEC11AP67812 179 aa9.81□□□□□ -0.84
GARNL3-204ENST00000429629 PDZD11Q5EBL8 140 aa9.81□□□□□ -0.84
GARNL3-204ENST00000429629 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
GARNL3-204ENST00000429629 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
GARNL3-204ENST00000429629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-204ENST00000429629 ATP5LO75964 103 aa9.8□□□□□ -0.84
GARNL3-204ENST00000429629 LINC00173Q6ZV60 143 aa9.8□□□□□ -0.84
GARNL3-204ENST00000429629 LINC01561Q8N1V8 128 aa9.8□□□□□ -0.84
GARNL3-204ENST00000429629 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
GARNL3-204ENST00000429629 COX7A2LO14548 114 aa9.79□□□□□ -0.84
GARNL3-204ENST00000429629 LECT2O14960 151 aa9.79□□□□□ -0.84
GARNL3-204ENST00000429629 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
GARNL3-204ENST00000429629 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
GARNL3-204ENST00000429629 HSBP1O75506 76 aa9.78□□□□□ -0.84
GARNL3-204ENST00000429629 PRSS1P07477 247 aa9.78□□□□□ -0.84
GARNL3-204ENST00000429629 PMVKQ15126 192 aa9.78□□□□□ -0.84
GARNL3-204ENST00000429629 CST9LQ9H4G1 147 aa9.78□□□□□ -0.84
GARNL3-204ENST00000429629 DYNC1H1Q14204 4646 aaKnown RBP9.78□□□□□ -0.84
GARNL3-204ENST00000429629 IGLV5-52A0A0A0MRZ9 124 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 C16orf90A8MZG2 172 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms