RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 C6orf99Q4VX62 202 aa9.47□□□□□ -0.89
LDB3-205ENST00000429277 NDUFV3P56181 108 aaKnown RBP9.47□□□□□ -0.89
LDB3-205ENST00000429277 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
LDB3-205ENST00000429277 C2orf16Q68DN1 1984 aa9.47□□□□□ -0.89
LDB3-205ENST00000429277 FAM19A5Q7Z5A7 132 aaPredicted RBP9.47□□□□□ -0.89
LDB3-205ENST00000429277 ZNF843Q8N446 348 aa9.47□□□□□ -0.89
LDB3-205ENST00000429277 FREM1Q5H8C1 2179 aa9.46□□□□□ -0.89
LDB3-205ENST00000429277 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.89
LDB3-205ENST00000429277 TRIAP1O43715 76 aa9.46□□□□□ -0.89
LDB3-205ENST00000429277 FAM236CP0DP71 79 aa9.46□□□□□ -0.89
LDB3-205ENST00000429277 PRR15LQ9BU68 103 aa9.46□□□□□ -0.89
LDB3-205ENST00000429277 ADAMTS9Q9P2N4 1935 aa9.46□□□□□ -0.89
LDB3-205ENST00000429277 C20orf197Q8N268 126 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 IMUPQ9GZP8 106 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 WNK1Q9H4A3 2382 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 LOC107984640A0A0U1RRK4 108 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 TEX49A0A1B0GTD5 131 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 IGLV1-40P01703 118 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 CCKP06307 115 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 LINC01006Q8NI28 216 aa9.46□□□□□ -0.9
LDB3-205ENST00000429277 C22orf34Q6ZV56 151 aa9.45□□□□□ -0.9
LDB3-205ENST00000429277 BBC3Q96PG8 261 aaPredicted RBP9.45□□□□□ -0.9
LDB3-205ENST00000429277 NCOA6Q14686 2063 aaPredicted RBP9.45□□□□□ -0.9
LDB3-205ENST00000429277 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
LDB3-205ENST00000429277 PRO3102Q9H379 93 aa9.45□□□□□ -0.9
LDB3-205ENST00000429277 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
LDB3-205ENST00000429277 TSHBP01222 138 aa9.45□□□□□ -0.9
LDB3-205ENST00000429277 LINC00482Q8N8I6 264 aa9.45□□□□□ -0.9
LDB3-205ENST00000429277 IGLV2-11P01706 119 aa9.45□□□□□ -0.9
LDB3-205ENST00000429277 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
LDB3-205ENST00000429277 ATRXP46100 2492 aa9.44□□□□□ -0.9
LDB3-205ENST00000429277 LY6G6DO95868 133 aa9.44□□□□□ -0.9
LDB3-205ENST00000429277 RNASE3P12724 160 aaKnown RBP9.44□□□□□ -0.9
LDB3-205ENST00000429277 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
LDB3-205ENST00000429277 CHCHD7Q9BUK0 85 aa9.44□□□□□ -0.9
LDB3-205ENST00000429277 CUL9Q8IWT3 2517 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 Q8N976 141 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 ZNF106Q9H2Y7 1883 aaKnown RBP9.43□□□□□ -0.9
LDB3-205ENST00000429277 POLR2KP53803 58 aaKnown RBP9.43□□□□□ -0.9
LDB3-205ENST00000429277 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 NRACQ8N912 160 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 A0A096LNI7 61 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 LINC00959A0A1B0GUT2 108 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 NDUFA7O95182 113 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
LDB3-205ENST00000429277 CACNA1AO00555 2505 aa9.42□□□□□ -0.9
LDB3-205ENST00000429277 CSPG4Q6UVK1 2322 aa9.42□□□□□ -0.9
LDB3-205ENST00000429277 LRCOL1A6NCL2 159 aa9.42□□□□□ -0.9
LDB3-205ENST00000429277 UBE2D1P51668 147 aa9.42□□□□□ -0.9
LDB3-205ENST00000429277 C3orf22Q8N5N4 141 aa9.42□□□□□ -0.9
LDB3-205ENST00000429277 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.42□□□□□ -0.9
LDB3-205ENST00000429277 Q8IZM0 81 aa9.42□□□□□ -0.9
LDB3-205ENST00000429277 MRPL55Q7Z7F7 128 aaKnown RBP9.42□□□□□ -0.9
LDB3-205ENST00000429277 MAPKAPK5-AS1Q8N8E1 139 aa9.41□□□□□ -0.9
LDB3-205ENST00000429277 OTOGLQ3ZCN5 2332 aa9.41□□□□□ -0.9
LDB3-205ENST00000429277 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
LDB3-205ENST00000429277 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
LDB3-205ENST00000429277 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
LDB3-205ENST00000429277 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
LDB3-205ENST00000429277 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
LDB3-205ENST00000429277 SLPIP03973 132 aa9.41□□□□□ -0.9
LDB3-205ENST00000429277 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.9
LDB3-205ENST00000429277 LST1O00453 97 aa9.4□□□□□ -0.9
LDB3-205ENST00000429277 SVIPQ8NHG7 77 aa9.4□□□□□ -0.9
LDB3-205ENST00000429277 ALPK3Q96L96 1907 aa9.4□□□□□ -0.9
LDB3-205ENST00000429277 SONP18583 2426 aaKnown RBP9.4□□□□□ -0.9
LDB3-205ENST00000429277 Q6ZQY7 126 aa9.4□□□□□ -0.9
LDB3-205ENST00000429277 FAM19A3Q7Z5A8 133 aa9.4□□□□□ -0.9
LDB3-205ENST00000429277 DSCAMO60469 2012 aa9.4□□□□□ -0.9
LDB3-205ENST00000429277 SORL1Q92673 2214 aa9.4□□□□□ -0.91
LDB3-205ENST00000429277 DCANP1Q8TF63 244 aa9.39□□□□□ -0.91
LDB3-205ENST00000429277 MT-ATP8P03928 68 aa9.39□□□□□ -0.91
LDB3-205ENST00000429277 UBE2D3P61077 147 aa9.39□□□□□ -0.91
LDB3-205ENST00000429277 UBE2D2P62837 147 aa9.39□□□□□ -0.91
LDB3-205ENST00000429277 PROK1P58294 105 aa9.39□□□□□ -0.91
LDB3-205ENST00000429277 C10orf99Q6UWK7 81 aa9.39□□□□□ -0.91
LDB3-205ENST00000429277 YPEL4Q96NS1 127 aa9.38□□□□□ -0.91
LDB3-205ENST00000429277 WFDC10BQ8IUB3 73 aa9.38□□□□□ -0.91
LDB3-205ENST00000429277 SERP2Q8N6R1 65 aa9.38□□□□□ -0.91
LDB3-205ENST00000429277 NAV3Q8IVL0 2385 aa9.37□□□□□ -0.91
LDB3-205ENST00000429277 ZNF73O43830 326 aaPredicted RBP9.37□□□□□ -0.91
LDB3-205ENST00000429277 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
LDB3-205ENST00000429277 IGKV2-28A0A075B6P5 120 aa9.36□□□□□ -0.91
LDB3-205ENST00000429277 IGKV2D-28P01615 120 aa9.36□□□□□ -0.91
LDB3-205ENST00000429277 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
LDB3-205ENST00000429277 Q8N9L7 120 aa9.36□□□□□ -0.91
LDB3-205ENST00000429277 CDC42SE2Q9NRR3 84 aa9.36□□□□□ -0.91
LDB3-205ENST00000429277 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
LDB3-205ENST00000429277 KIAA1549LQ6ZVL6 1849 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 SPTSSBQ8NFR3 76 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 PRR14LQ5THK1 2151 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 BRI3O95415 125 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
LDB3-205ENST00000429277 EGFEM1PQ0D2K5 195 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 PRR9Q5T870 116 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 F8WDY8 70 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
LDB3-205ENST00000429277 MED12LQ86YW9 2145 aa9.34□□□□□ -0.91
LDB3-205ENST00000429277 CLUHP3Q96NS8 147 aa9.34□□□□□ -0.91
LDB3-205ENST00000429277 SMIM11BQ8TCY0 68 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms