RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 SMIM9A6NGZ8 99 aa8.27□□□□□ -1.09
PABPC1P11-201ENST00000428966 SUMO4Q6EEV6 95 aa8.27□□□□□ -1.09
PABPC1P11-201ENST00000428966 SCGB1D4Q6XE38 83 aa8.27□□□□□ -1.09
PABPC1P11-201ENST00000428966 EMP1P54849 157 aa8.27□□□□□ -1.09
PABPC1P11-201ENST00000428966 RYR3Q15413 4870 aa8.27□□□□□ -1.09
PABPC1P11-201ENST00000428966 DYNC2H1Q8NCM8 4307 aaKnown RBP8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 TEX48A0A1B0GUV7 120 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 F5H697 171 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 AZU1P20160 251 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 GAGE13Q4V321 117 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 LYSTQ99698 3801 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 SACSQ9NZJ4 4579 aa8.26□□□□□ -1.09
PABPC1P11-201ENST00000428966 TRAV12-3A0A0B4J271 114 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 CRYGDP07320 174 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 HTN1P15515 57 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 SRSF9Q13242 221 aaKnown RBP eCLIP8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 LINC01587Q99440 93 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 SDHAF1A6NFY7 115 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 C9orf85Q96MD7 179 aa8.25□□□□□ -1.09
PABPC1P11-201ENST00000428966 IGLV4-69A0A075B6H9 119 aa8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 IGHV3-16A0A0C4DH30 117 aa8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 H3BMG7 143 aa8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 RHOHQ15669 191 aa8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 Q6ZTC4 211 aa8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 SPANXB1Q9NS25 103 aaPredicted RBP8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 TSHBP01222 138 aa8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 MRPL16Q9NX20 251 aaKnown RBP8.24□□□□□ -1.09
PABPC1P11-201ENST00000428966 A0A087WWL8 130 aa8.23□□□□□ -1.09
PABPC1P11-201ENST00000428966 UBE2D1P51668 147 aa8.23□□□□□ -1.09
PABPC1P11-201ENST00000428966 WFDC2Q14508 124 aa8.23□□□□□ -1.09
PABPC1P11-201ENST00000428966 FAM222AQ5U5X8 452 aa8.23□□□□□ -1.09
PABPC1P11-201ENST00000428966 CEMP1Q6PRD7 247 aaPredicted RBP8.23□□□□□ -1.09
PABPC1P11-201ENST00000428966 MUC4Q99102 2169 aa8.23□□□□□ -1.09
PABPC1P11-201ENST00000428966 IGHV1OR15-1A0A075B7D0 117 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 NUPR2A6NF83 97 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 ZNF876PQ49A33 203 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 JPT2Q9H910 190 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 SPART-AS1P0CW21 52 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 SCGB1A1P11684 91 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 ZNF56Q15929 161 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
PABPC1P11-201ENST00000428966 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 A0A0J9YY99 117 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 M0QY20 66 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 FAM74A4Q5TZK3 123 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 NFE4Q86UQ8 179 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 TMEM263Q8WUH6 116 aaKnown RBP8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 SIGMAR1Q99720 223 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 PRO0461Q9UI25 63 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 HYDINQ4G0P3 5121 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 RYR2Q92736 4967 aa8.21□□□□□ -1.1
PABPC1P11-201ENST00000428966 LGALS3P17931 250 aaKnown RBP8.2□□□□□ -1.1
PABPC1P11-201ENST00000428966 LCE2AQ5TA79 106 aaPredicted RBP8.2□□□□□ -1.1
PABPC1P11-201ENST00000428966 C16orf74Q96GX8 76 aa8.2□□□□□ -1.1
PABPC1P11-201ENST00000428966 TMEM238C9JI98 176 aa8.2□□□□□ -1.1
PABPC1P11-201ENST00000428966 ETDBQ3ZM63 59 aa8.2□□□□□ -1.1
PABPC1P11-201ENST00000428966 SLC25A29Q8N8R3 303 aa8.2□□□□□ -1.1
PABPC1P11-201ENST00000428966 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
PABPC1P11-201ENST00000428966 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 I3L3M4 83 aa8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 TRBV20-1A0A075B6N2 111 aa8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 J3QQQ9 107 aa8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 TSPAN13O95857 204 aa8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 NOP10Q9NPE3 64 aaKnown RBP8.19□□□□□ -1.1
PABPC1P11-201ENST00000428966 LYRM9A8MSI8 78 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 LEPROTO15243 131 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 DEFB130BP0DP73 79 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 DEFB130AP0DP74 79 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 UBE2D3P61077 147 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 UBE2D2P62837 147 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 C20orf203Q8NBC4 194 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 C11orf72Q8NBR9 251 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 LINC00467Q9BRT7 94 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 KLK5Q9Y337 293 aaPredicted RBP8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 DNAH1Q9P2D7 4330 aa8.18□□□□□ -1.1
PABPC1P11-201ENST00000428966 DEFB131BA0A096LNP1 70 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 LOC107984156A0A0G2JMH3 177 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 DAD1P61803 113 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 CFAP126Q5VTH2 177 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 ARL17AQ8IVW1 177 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 TMEM223A0PJW6 202 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 APOMO95445 188 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 PSMB2P49721 201 aa8.17□□□□□ -1.1
PABPC1P11-201ENST00000428966 LCE6AA0A183 80 aa8.16□□□□□ -1.1
PABPC1P11-201ENST00000428966 CRYBA4P53673 196 aa8.16□□□□□ -1.1
PABPC1P11-201ENST00000428966 VCX2Q9H322 139 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms