RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 ATP5LO75964 103 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 LEPROTL1O95214 131 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 ANGP03950 147 aaKnown RBP5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 DNAH10OSP0CZ25 163 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 FABP4P15090 132 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 RNASE13Q5GAN3 156 aaKnown RBP5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 LINC01556Q5JQF7 62 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 LGALS9CQ6DKI2 356 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 CLPSL2Q6UWE3 100 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 ERASQ7Z444 233 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 HIST3H2BBQ8N257 126 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 TMEM141Q96I45 108 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 TIMM17AQ99595 171 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 Q9H8V8 135 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 HSPB8Q9UJY1 196 aa5.39□□□□□ -1.55
HMGA1P4-201ENST00000428643 IGLV4-3A0A075B6K6 122 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 IGKV3OR2-268A0A0C4DH90 116 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 A0A1B0GUV1 79 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 IGIPA6NJ69 53 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 H0Y8G0 127 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 CRPP02741 224 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 PAPPA-AS1Q5QFB9 102 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 C2orf88Q9BSF0 95 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 KLK12Q9UKR0 248 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 PYGO1Q9Y3Y4 419 aa5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 CSDC2Q9Y534 153 aaKnown RBP5.38□□□□□ -1.55
HMGA1P4-201ENST00000428643 TENM2Q9NT68 2774 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 TRAV9-2A0A087WT02 112 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 C5orf52A6NGY3 159 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 IFITM10A6NMD0 228 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 TTC32Q5I0X7 151 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 XP32Q5T750 250 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 TEX43Q6ZNM6 134 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 LINC00173Q6ZV60 143 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 LINC00269Q8N2A0 174 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 ZNF664Q8N3J9 261 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 C10orf126Q8N4M7 172 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 UBE2WQ96B02 151 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 IFI27L1Q96BM0 104 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 HIST1H2BLQ99880 126 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 VCX2Q9H322 139 aa5.37□□□□□ -1.55
HMGA1P4-201ENST00000428643 TRAV13-1A0A0B4J241 112 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 NBDYA0A0U1RRE5 68 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 PRSS1P07477 247 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 NPSP0C0P6 89 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 KRTDAPP60985 99 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 REG3AQ06141 175 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 ZC2HC1BQ5TFG8 222 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 BAALCQ8WXS3 180 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 PACRGQ96M98 296 aaPredicted RBP5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 MAP1LC3CQ9BXW4 147 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 Q9HAA7 133 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 CDC42SE2Q9NRR3 84 aa5.36□□□□□ -1.55
HMGA1P4-201ENST00000428643 K7EP13 123 aa5.35□□□□□ -1.55
HMGA1P4-201ENST00000428643 M0R2N4 97 aa5.35□□□□□ -1.55
HMGA1P4-201ENST00000428643 PMVKQ15126 192 aa5.35□□□□□ -1.55
HMGA1P4-201ENST00000428643 FAM104AQ969W3 186 aa5.35□□□□□ -1.55
HMGA1P4-201ENST00000428643 KRTAP1-5Q9BYS1 174 aa5.35□□□□□ -1.55
HMGA1P4-201ENST00000428643 RYR2Q92736 4967 aa5.35□□□□□ -1.55
HMGA1P4-201ENST00000428643 LYSTQ99698 3801 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 IGLV10-54A0A075B6I4 117 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 LCE6AA0A183 80 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 PRSS29PA6NIE9 313 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 MIAQ16674 131 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 AMELXQ99217 191 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 CST9LQ9H4G1 147 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 PRR34Q9NV39 138 aa5.34□□□□□ -1.55
HMGA1P4-201ENST00000428643 IGKV2D-24A0A075B6R9 120 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 TRAV8-3A0A0A6YYJ7 113 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 LINC00959A0A1B0GUT2 108 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 C20orf202A1L168 122 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 IBA57-AS1B1ANH7 110 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 C3orf79P0CE67 100 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 XCL1P47992 114 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 SS18Q15532 418 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 ENHOQ6UWT2 76 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 OR10D4PQ8NGN7 298 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 RMI2Q96E14 147 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 C1orf43Q9BWL3 253 aa5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 CHTOPQ9Y3Y2 248 aaKnown RBP5.33□□□□□ -1.56
HMGA1P4-201ENST00000428643 EPPK1P58107 5090 aaKnown RBP5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 TRAV12-1A0A0B4J245 112 aa5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 TRAV8-4A0A0B4J246 113 aa5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 CCL25O15444 150 aa5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 UBE2D1P51668 147 aa5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 CHCHD10Q8WYQ3 142 aaPredicted RBP5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 PMCHL2Q9BQD1 86 aa5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 CHAC1Q9BUX1 264 aa5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 GEMIN7Q9H840 131 aaKnown RBP5.32□□□□□ -1.56
HMGA1P4-201ENST00000428643 GAGE12HA6NDE8 117 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 F8VRH5 84 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms