RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 C5orf47Q569G3 176 aa7.83□□□□□ -1.16
ATP2C1-204ENST00000428331 TRBV7-7A0A0K0K1E9 115 aa7.83□□□□□ -1.16
ATP2C1-204ENST00000428331 ATP5G1P05496 136 aa7.83□□□□□ -1.16
ATP2C1-204ENST00000428331 SLURP1P55000 103 aa7.83□□□□□ -1.16
ATP2C1-204ENST00000428331 VPREB3Q9UKI3 123 aa7.83□□□□□ -1.16
ATP2C1-204ENST00000428331 ZFHX4Q86UP3 3567 aa7.83□□□□□ -1.16
ATP2C1-204ENST00000428331 PF4P02776 101 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 PRM2P04554 102 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 NCOR2Q9Y618 2525 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 RBMY1BA6NDE4 496 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 RBMY1EA6NEQ0 496 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 RBMY1DP0C7P1 496 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 DEFB136Q30KP8 78 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 ACACBO00763 2458 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 LRBAP50851 2863 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 DEFB121Q5J5C9 76 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 HIST2H2BCQ6DN03 193 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 HIST2H2BDQ6DRA6 164 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 TMEM243Q9BU79 118 aa7.82□□□□□ -1.16
ATP2C1-204ENST00000428331 USP9YO00507 2555 aaPredicted RBP7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 TRGV2A0A075B6R0 118 aa7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 DCHS1Q96JQ0 3298 aa7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 J3QLI3 93 aa7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 Q6ZSN1 163 aa7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 ASPMQ8IZT6 3477 aa7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 RS1O15537 224 aa7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 LINC00242Q5T6M2 205 aa7.81□□□□□ -1.16
ATP2C1-204ENST00000428331 TRBV10-1A0A0K0K1A3 114 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 UQCRQO14949 82 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 FAM110AQ9BQ89 295 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 PRORYQ9H606 182 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 AVPP01185 164 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 MYO9AB2RTY4 2548 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 PAX4O43316 350 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 RBMY1FQ15415 496 aaKnown RBP7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 SND1-IT1Q9HBX3 110 aa7.8□□□□□ -1.16
ATP2C1-204ENST00000428331 MAP6D1Q9H9H5 199 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 H0YGX0 51 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 K7EQD1 137 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 MALP21145 153 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 IGLV5-45A0A087WSX0 123 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 COX6A2Q02221 97 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 Q9UF83 564 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 Q9HAA7 133 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 WNK1Q9H4A3 2382 aa7.79□□□□□ -1.16
ATP2C1-204ENST00000428331 SMIM1B2RUZ4 78 aa7.78□□□□□ -1.16
ATP2C1-204ENST00000428331 ATOX1O00244 68 aa7.78□□□□□ -1.16
ATP2C1-204ENST00000428331 IGLV5-39A0A0G2JS06 123 aa7.78□□□□□ -1.16
ATP2C1-204ENST00000428331 TRGV4A0A0C4DH28 118 aa7.78□□□□□ -1.16
ATP2C1-204ENST00000428331 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
ATP2C1-204ENST00000428331 FAM222AQ5U5X8 452 aa7.78□□□□□ -1.16
ATP2C1-204ENST00000428331 BEAN1Q3B7T3 259 aa7.77□□□□□ -1.17
ATP2C1-204ENST00000428331 USP9XQ93008 2570 aaPredicted RBP7.77□□□□□ -1.17
ATP2C1-204ENST00000428331 COX7B2Q8TF08 81 aa7.77□□□□□ -1.17
ATP2C1-204ENST00000428331 ATMQ13315 3056 aa7.77□□□□□ -1.17
ATP2C1-204ENST00000428331 DMXL1Q9Y485 3027 aa7.77□□□□□ -1.17
ATP2C1-204ENST00000428331 FAM208BQ5VWN6 2430 aa7.77□□□□□ -1.17
ATP2C1-204ENST00000428331 CXCL5P42830 114 aa7.77□□□□□ -1.17
ATP2C1-204ENST00000428331 MAPK1IP1LQ8NDC0 245 aa7.76□□□□□ -1.17
ATP2C1-204ENST00000428331 TMEM86BQ8N661 226 aa7.76□□□□□ -1.17
ATP2C1-204ENST00000428331 PFN2P35080 140 aa7.76□□□□□ -1.17
ATP2C1-204ENST00000428331 CSDC2Q9Y534 153 aaKnown RBP7.76□□□□□ -1.17
ATP2C1-204ENST00000428331 C6orf226Q5I0X4 101 aa7.76□□□□□ -1.17
ATP2C1-204ENST00000428331 NDUFA7O95182 113 aa7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 SMG1Q96Q15 3661 aaKnown RBP7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 Q8N2B8 174 aa7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 CACNA1AO00555 2505 aa7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 S100A7L2Q5SY68 101 aa7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 CDC42SE2Q9NRR3 84 aa7.75□□□□□ -1.17
ATP2C1-204ENST00000428331 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 F5H768 121 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 RPL28P46779 137 aaKnown RBP7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 DEFB114Q30KQ6 69 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 C11orf72Q8NBR9 251 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 CHD8Q9HCK8 2581 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 CMC4P56277 68 aaPredicted RBP7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 Q6ZTI0 123 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 ZNF702PQ9H963 129 aa7.74□□□□□ -1.17
ATP2C1-204ENST00000428331 ABCA2Q9BZC7 2435 aa7.73□□□□□ -1.17
ATP2C1-204ENST00000428331 COX7CP15954 63 aa7.73□□□□□ -1.17
ATP2C1-204ENST00000428331 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
ATP2C1-204ENST00000428331 C14orf132Q9NPU4 83 aa7.73□□□□□ -1.17
ATP2C1-204ENST00000428331 IGKV3D-7A0A0C4DH55 119 aa7.73□□□□□ -1.17
ATP2C1-204ENST00000428331 LECT2O14960 151 aa7.73□□□□□ -1.17
ATP2C1-204ENST00000428331 HIST1H4AP62805 103 aaKnown RBP7.73□□□□□ -1.17
ATP2C1-204ENST00000428331 A0A1B0GX51 115 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 A0A1W2PRX2 142 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 MRAPQ8TCY5 172 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 J3KT08 172 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 Q6YL49 198 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 C4orf3Q8WVX3 66 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms