RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 H0YIZ8 118 aa5.16□□□□□ -1.58
LSG1-202ENST00000427461 PEX7O00628 323 aa5.16□□□□□ -1.58
LSG1-202ENST00000427461 CDC34P49427 236 aaPredicted RBP5.16□□□□□ -1.58
LSG1-202ENST00000427461 RASL11AQ6T310 242 aa5.16□□□□□ -1.58
LSG1-202ENST00000427461 CD164L2Q6UWJ8 174 aa5.16□□□□□ -1.58
LSG1-202ENST00000427461 TCTE3Q8IZS6 198 aa5.16□□□□□ -1.58
LSG1-202ENST00000427461 AP1S3Q96PC3 154 aa5.16□□□□□ -1.58
LSG1-202ENST00000427461 GAGE2EQ4V326 116 aa5.15□□□□□ -1.59
LSG1-202ENST00000427461 C2orf48Q96LS8 159 aa5.15□□□□□ -1.59
LSG1-202ENST00000427461 NIT2Q9NQR4 276 aa5.15□□□□□ -1.59
LSG1-202ENST00000427461 NUDT15Q9NV35 164 aa5.15□□□□□ -1.59
LSG1-202ENST00000427461 GAGE2DQ9UEU5 116 aa5.15□□□□□ -1.59
LSG1-202ENST00000427461 ZFP30Q9Y2G7 519 aa5.15□□□□□ -1.59
LSG1-202ENST00000427461 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
LSG1-202ENST00000427461 KRTAP4-16G5E9R7 235 aaPredicted RBP5.14□□□□□ -1.59
LSG1-202ENST00000427461 OR5AL1P0C617 328 aa5.14□□□□□ -1.59
LSG1-202ENST00000427461 ESDP10768 282 aa5.14□□□□□ -1.59
LSG1-202ENST00000427461 NTF3P20783 257 aa5.14□□□□□ -1.59
LSG1-202ENST00000427461 UBE2G2P60604 165 aa5.14□□□□□ -1.59
LSG1-202ENST00000427461 SS18Q15532 418 aa5.14□□□□□ -1.59
LSG1-202ENST00000427461 CTDSP1Q9GZU7 261 aa5.14□□□□□ -1.59
LSG1-202ENST00000427461 WFDC1Q9HC57 220 aa5.14□□□□□ -1.59
LSG1-202ENST00000427461 A0A1W2PRE2 83 aa5.13□□□□□ -1.59
LSG1-202ENST00000427461 SIX6O95475 246 aa5.13□□□□□ -1.59
LSG1-202ENST00000427461 IFITM2Q01629 132 aa5.13□□□□□ -1.59
LSG1-202ENST00000427461 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
LSG1-202ENST00000427461 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
LSG1-202ENST00000427461 TMEM167BQ9NRX6 74 aa5.13□□□□□ -1.59
LSG1-202ENST00000427461 COX7A2LO14548 114 aa5.12□□□□□ -1.59
LSG1-202ENST00000427461 CXCL1P09341 107 aa5.12□□□□□ -1.59
LSG1-202ENST00000427461 SPAG11BQ08648 103 aa5.12□□□□□ -1.59
LSG1-202ENST00000427461 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
LSG1-202ENST00000427461 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
LSG1-202ENST00000427461 HSPB11Q9Y547 144 aa5.12□□□□□ -1.59
LSG1-202ENST00000427461 ATP6V1G1O75348 118 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 CXorf1O96002 111 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 LTAP01374 205 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 UBE2G1P62253 170 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 C5orf38Q86SI9 138 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 OR2D3Q8NGH3 330 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 FAM210AQ96ND0 272 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 IMMP2LQ96T52 175 aa5.11□□□□□ -1.59
LSG1-202ENST00000427461 MRPL35Q9NZE8 188 aaKnown RBP5.11□□□□□ -1.59
LSG1-202ENST00000427461 G3V3Q6 166 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 H7C423 109 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 NUPR1O60356 82 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 APCSP02743 223 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 ZNF25P17030 456 aaPredicted RBP5.1□□□□□ -1.59
LSG1-202ENST00000427461 NDUFA5Q16718 116 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 Q5BKY6 102 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 HIST1H2BAQ96A08 127 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 FMC1Q96HJ9 113 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 TMEM101Q96IK0 257 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 BTF3L4Q96K17 158 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 SMDT1Q9H4I9 107 aa5.1□□□□□ -1.59
LSG1-202ENST00000427461 IGKV2D-26A0A0A0MRZ7 120 aa5.09□□□□□ -1.59
LSG1-202ENST00000427461 SSNA1O43805 119 aa5.09□□□□□ -1.59
LSG1-202ENST00000427461 RPL28P46779 137 aaKnown RBP5.09□□□□□ -1.59
LSG1-202ENST00000427461 C9orf129Q5T035 196 aaKnown RBP5.09□□□□□ -1.59
LSG1-202ENST00000427461 UNQ6190/PRO20217Q6UXQ8 127 aa5.09□□□□□ -1.59
LSG1-202ENST00000427461 TPPP3Q9BW30 176 aa5.09□□□□□ -1.59
LSG1-202ENST00000427461 CDC42SE2Q9NRR3 84 aa5.09□□□□□ -1.59
LSG1-202ENST00000427461 C6orf48Q9UBA6 75 aa5.09□□□□□ -1.59
LSG1-202ENST00000427461 FAM74A7A6NL05 159 aa5.08□□□□□ -1.6
LSG1-202ENST00000427461 SMLR1H3BR10 107 aa5.08□□□□□ -1.6
LSG1-202ENST00000427461 GIPP09681 153 aaPredicted RBP5.08□□□□□ -1.6
LSG1-202ENST00000427461 CTAG1AP78358 180 aa5.08□□□□□ -1.6
LSG1-202ENST00000427461 FAM229BQ4G0N7 80 aa5.08□□□□□ -1.6
LSG1-202ENST00000427461 C9orf62Q8N4C0 152 aa5.08□□□□□ -1.6
LSG1-202ENST00000427461 RPL39LQ96EH5 51 aaKnown RBP5.08□□□□□ -1.6
LSG1-202ENST00000427461 BCE1O60756 84 aa5.07□□□□□ -1.6
LSG1-202ENST00000427461 NCR2O95944 276 aa5.07□□□□□ -1.6
LSG1-202ENST00000427461 RNASE13Q5GAN3 156 aaKnown RBP5.07□□□□□ -1.6
LSG1-202ENST00000427461 C3orf22Q8N5N4 141 aa5.07□□□□□ -1.6
LSG1-202ENST00000427461 GATD1Q8NB37 220 aa5.07□□□□□ -1.6
LSG1-202ENST00000427461 IGLV8-61A0A075B6I0 122 aa5.06□□□□□ -1.6
LSG1-202ENST00000427461 C1orf196B1AJZ1 125 aa5.06□□□□□ -1.6
LSG1-202ENST00000427461 NDUFA1O15239 70 aa5.06□□□□□ -1.6
LSG1-202ENST00000427461 SLC7A5P1Q8MH63 180 aa5.06□□□□□ -1.6
LSG1-202ENST00000427461 ORAOV1Q8WV07 137 aa5.06□□□□□ -1.6
LSG1-202ENST00000427461 ACTR3CQ9C0K3 210 aaPredicted RBP5.06□□□□□ -1.6
LSG1-202ENST00000427461 C22orf24Q9Y442 160 aa5.06□□□□□ -1.6
LSG1-202ENST00000427461 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 IGLC6P0CF74 106 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 S100A1P23297 94 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 ATP6V0CP27449 155 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 CTRLP40313 264 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 AKR1C3P42330 323 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 H2BFSP57053 126 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 ZNF726P1Q15940 193 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 UBE2D4Q9Y2X8 147 aa5.05□□□□□ -1.6
LSG1-202ENST00000427461 TRAV13-1A0A0B4J241 112 aa5.04□□□□□ -1.6
LSG1-202ENST00000427461 HMSDA8MTL9 139 aa5.04□□□□□ -1.6
LSG1-202ENST00000427461 TMEM241Q24JQ0 296 aa5.04□□□□□ -1.6
LSG1-202ENST00000427461 PCOTHQ58A44 107 aa5.04□□□□□ -1.6
LSG1-202ENST00000427461 OR10D4PQ8NGN7 298 aa5.04□□□□□ -1.6
LSG1-202ENST00000427461 PPP1R1CQ8WVI7 109 aa5.04□□□□□ -1.6
LSG1-202ENST00000427461 SDHAF1A6NFY7 115 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms