RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 HTN1P15515 57 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 RAB4AP20338 218 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 RAB5AP20339 215 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 S100PP25815 95 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 S100A4P26447 101 aaKnown RBP3.72□□□□□ -1.81
C9orf3-205ENST00000427193 S100A12P80511 92 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 COX19Q49B96 90 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 SPANXN1Q5VSR9 72 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 MRPL54Q6P161 138 aaKnown RBP3.72□□□□□ -1.81
C9orf3-205ENST00000427193 KCNIP4Q6PIL6 250 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
C9orf3-205ENST00000427193 AP1S3Q96PC3 154 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 MRPL16Q9NX20 251 aaKnown RBP3.72□□□□□ -1.81
C9orf3-205ENST00000427193 Q9UF83 564 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 PKD1P98161 4303 aa3.71□□□□□ -1.81
C9orf3-205ENST00000427193 TRGV1A0A0A0MS02 117 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 TRBV6-5A0A0K0K1A5 114 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 TRBV6-4A0A1B0GX49 114 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 HLA-DQA1P01909 254 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 S100A8P05109 93 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 TRGC1P0CF51 173 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 SPART-AS1P0CW21 52 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 RPL32P62910 135 aaKnown RBP3.71□□□□□ -1.82
C9orf3-205ENST00000427193 AMN1Q8IY45 258 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 C14orf178Q8N769 122 aaPredicted RBP3.71□□□□□ -1.82
C9orf3-205ENST00000427193 VSIG2Q96IQ7 327 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 DPH3P1Q9H4G8 78 aa3.71□□□□□ -1.82
C9orf3-205ENST00000427193 GEMIN7Q9H840 131 aaKnown RBP3.71□□□□□ -1.82
C9orf3-205ENST00000427193 IGLV2-18A0A075B6J9 118 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 NUPR2A6NF83 97 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 LINC01546A6NGU7 62 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 H3BNG1 76 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 RPS10P46783 165 aaKnown RBP3.7□□□□□ -1.82
C9orf3-205ENST00000427193 POLR2KP53803 58 aaKnown RBP3.7□□□□□ -1.82
C9orf3-205ENST00000427193 RAB4BP61018 213 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 MRPL51Q4U2R6 128 aaKnown RBP3.7□□□□□ -1.82
C9orf3-205ENST00000427193 LGALS9CQ6DKI2 356 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 ERASQ7Z444 233 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 SLC25A29Q8N8R3 303 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 MRAP2Q96G30 205 aa3.7□□□□□ -1.82
C9orf3-205ENST00000427193 TRBV10-1A0A0K0K1A3 114 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 TRBV27A0A0K0K1C4 114 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 PPBPP02775 128 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 TRGC2P03986 189 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 ATP5G1P05496 136 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 DEFB130BP0DP73 79 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 DEFB130AP0DP74 79 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 VPREB1P12018 145 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 CRYBA4P53673 196 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 EMP1P54849 157 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 COA6Q5JTJ3 125 aaKnown RBP3.69□□□□□ -1.82
C9orf3-205ENST00000427193 OR4C5Q8NGB2 326 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 LAMTOR2Q9Y2Q5 125 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
C9orf3-205ENST00000427193 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
C9orf3-205ENST00000427193 LRP1BQ9NZR2 4599 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 TRGV2A0A075B6R0 118 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 TRAV26-2A0A0B4J265 109 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 A0A0U1RRA0 63 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 D6R8Y8 96 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BKO60814 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 NPYP01303 97 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 APCSP02743 223 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BJP06899 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BOP23527 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BBP33778 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BDP58876 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 DAD1P61803 113 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BCP62807 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 Q0VG73 95 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST2H2BEQ16778 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 LBHQ53QV2 105 aaPredicted RBP3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.68□□□□□ -1.82
C9orf3-205ENST00000427193 ORMDL3Q8N138 153 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 C11orf45Q8TAV5 145 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BHQ93079 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 BORCS7Q96B45 105 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BNQ99877 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HIST1H2BMQ99879 126 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 C20orf78Q9BR46 151 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 TMEM70Q9BUB7 260 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 NIT2Q9NQR4 276 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 PRO0255Q9UI72 69 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 HHLA3Q9XRX5 114 aa3.68□□□□□ -1.82
C9orf3-205ENST00000427193 TRAV26-1A0A087WT03 109 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 PCP4L1A6NKN8 68 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 SMKR1H3BMG3 65 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 K7EQD1 137 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 P0DMU3 169 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 FAM231AP0DMU4 169 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 FAM231CP0DMU5 169 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 ESDP10768 282 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 UBE2D3P61077 147 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 UBE2D2P62837 147 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 FABP9Q0Z7S8 132 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 RHOHQ15669 191 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
C9orf3-205ENST00000427193 DNAJC30Q96LL9 226 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms