RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PRSS3P2Q8NHM4 247 aa16.27■□□□□ 0.2
VEGFA-209ENST00000425836 TIMM21Q9BVV7 248 aa16.27■□□□□ 0.2
VEGFA-209ENST00000425836 EPPK1P58107 5090 aaKnown RBP16.27■□□□□ 0.2
VEGFA-209ENST00000425836 DNAH11Q96DT5 4516 aa16.26■□□□□ 0.19
VEGFA-209ENST00000425836 COLCA2A8K830 154 aa16.26■□□□□ 0.19
VEGFA-209ENST00000425836 SMAGPQ0VAQ4 97 aa16.26■□□□□ 0.19
VEGFA-209ENST00000425836 ORMDL2Q53FV1 153 aa16.26■□□□□ 0.19
VEGFA-209ENST00000425836 DGAT2L7PQ6IED9 249 aa16.26■□□□□ 0.19
VEGFA-209ENST00000425836 ZNF664Q8N3J9 261 aa16.26■□□□□ 0.19
VEGFA-209ENST00000425836 A0A087WTM6 91 aa16.25■□□□□ 0.19
VEGFA-209ENST00000425836 LRCOL1A6NCL2 159 aa16.25■□□□□ 0.19
VEGFA-209ENST00000425836 IGLV10-54A0A075B6I4 117 aa16.24■□□□□ 0.19
VEGFA-209ENST00000425836 TRAV8-4A0A0B4J246 113 aa16.24■□□□□ 0.19
VEGFA-209ENST00000425836 IGKV3OR2-268A0A0C4DH90 116 aa16.24■□□□□ 0.19
VEGFA-209ENST00000425836 PKD1P98161 4303 aa16.24■□□□□ 0.19
VEGFA-209ENST00000425836 KRTAP26-1Q6PEX3 210 aa16.23■□□□□ 0.19
VEGFA-209ENST00000425836 C18orf32Q8TCD1 76 aa16.23■□□□□ 0.19
VEGFA-209ENST00000425836 SPANXA1Q9NS26 97 aa16.23■□□□□ 0.19
VEGFA-209ENST00000425836 LINC01546A6NGU7 62 aa16.22■□□□□ 0.19
VEGFA-209ENST00000425836 C2orf66Q6UXQ4 117 aa16.21■□□□□ 0.19
VEGFA-209ENST00000425836 FAM104AQ969W3 186 aa16.21■□□□□ 0.19
VEGFA-209ENST00000425836 Q6ZUT4 128 aa16.21■□□□□ 0.18
VEGFA-209ENST00000425836 BAALCQ8WXS3 180 aa16.21■□□□□ 0.18
VEGFA-209ENST00000425836 TRGC2P03986 189 aa16.2■□□□□ 0.18
VEGFA-209ENST00000425836 WFDC2Q14508 124 aa16.2■□□□□ 0.18
VEGFA-209ENST00000425836 RNASE13Q5GAN3 156 aaKnown RBP16.2■□□□□ 0.18
VEGFA-209ENST00000425836 FA2HQ7L5A8 372 aa16.2■□□□□ 0.18
VEGFA-209ENST00000425836 OPRPNQ99935 248 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-209ENST00000425836 CYSLTR1Q9Y271 337 aa16.2■□□□□ 0.18
VEGFA-209ENST00000425836 HECTD4Q9Y4D8 3996 aa16.19■□□□□ 0.18
VEGFA-209ENST00000425836 EREGO14944 169 aa16.19■□□□□ 0.18
VEGFA-209ENST00000425836 PYGO1Q9Y3Y4 419 aa16.19■□□□□ 0.18
VEGFA-209ENST00000425836 LINC00959A0A1B0GUT2 108 aa16.18■□□□□ 0.18
VEGFA-209ENST00000425836 MRPS36P82909 103 aaKnown RBP16.17■□□□□ 0.18
VEGFA-209ENST00000425836 URB1-AS1Q96HZ7 61 aa16.17■□□□□ 0.18
VEGFA-209ENST00000425836 LECT2O14960 151 aa16.17■□□□□ 0.18
VEGFA-209ENST00000425836 G0S2P27469 103 aa16.17■□□□□ 0.18
VEGFA-209ENST00000425836 CHCHD10Q8WYQ3 142 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-209ENST00000425836 KRTAP10-2P60368 255 aa16.16■□□□□ 0.18
VEGFA-209ENST00000425836 SPATA12Q7Z6I5 190 aa16.16■□□□□ 0.18
VEGFA-209ENST00000425836 LINC00614P0C842 121 aa16.15■□□□□ 0.18
VEGFA-209ENST00000425836 TOMM6Q96B49 74 aa16.15■□□□□ 0.18
VEGFA-209ENST00000425836 GAGE12HA6NDE8 117 aa16.14■□□□□ 0.17
VEGFA-209ENST00000425836 AP5S1Q9NUS5 200 aa16.14■□□□□ 0.17
VEGFA-209ENST00000425836 IGLV4-3A0A075B6K6 122 aa16.13■□□□□ 0.17
VEGFA-209ENST00000425836 IGIPA6NJ69 53 aa16.13■□□□□ 0.17
VEGFA-209ENST00000425836 Q8N814 137 aa16.13■□□□□ 0.17
VEGFA-209ENST00000425836 SS18Q15532 418 aa16.13■□□□□ 0.17
VEGFA-209ENST00000425836 TRAV13-1A0A0B4J241 112 aa16.12■□□□□ 0.17
VEGFA-209ENST00000425836 CCL25O15444 150 aa16.12■□□□□ 0.17
VEGFA-209ENST00000425836 FUSP35637 526 aaKnown RBP eCLIP16.11■□□□□ 0.173e-8■□□□□ 10.5
VEGFA-209ENST00000425836 XCL1P47992 114 aa16.11■□□□□ 0.17
VEGFA-209ENST00000425836 RAB5BP61020 215 aa16.11■□□□□ 0.17
VEGFA-209ENST00000425836 TMEM141Q96I45 108 aa16.11■□□□□ 0.17
VEGFA-209ENST00000425836 DYNC1H1Q14204 4646 aaKnown RBP16.1■□□□□ 0.17
VEGFA-209ENST00000425836 C1orf196B1AJZ1 125 aa16.1■□□□□ 0.17
VEGFA-209ENST00000425836 USP17L23D6RBM5 183 aa16.09■□□□□ 0.17
VEGFA-209ENST00000425836 NPSP0C0P6 89 aa16.09■□□□□ 0.17
VEGFA-209ENST00000425836 FOXI1Q12951 378 aa16.09■□□□□ 0.17
VEGFA-209ENST00000425836 PGPEP1Q9NXJ5 209 aa16.09■□□□□ 0.17
VEGFA-209ENST00000425836 SCGB3A1Q96QR1 104 aa16.09■□□□□ 0.17
VEGFA-209ENST00000425836 TIMM17AQ99595 171 aa16.09■□□□□ 0.17
VEGFA-209ENST00000425836 LINC01549A6NIU2 74 aa16.08■□□□□ 0.16
VEGFA-209ENST00000425836 IFITM10A6NMD0 228 aa16.08■□□□□ 0.16
VEGFA-209ENST00000425836 ERASQ7Z444 233 aa16.08■□□□□ 0.16
VEGFA-209ENST00000425836 PKHD1P08F94 4074 aa16.08■□□□□ 0.16
VEGFA-209ENST00000425836 A0A096LNJ9 63 aa16.07■□□□□ 0.16
VEGFA-209ENST00000425836 CD164L2Q6UWJ8 174 aa16.07■□□□□ 0.16
VEGFA-209ENST00000425836 ZC2HC1BQ5TFG8 222 aa16.06■□□□□ 0.16
VEGFA-209ENST00000425836 Q6ZN92 141 aa16.06■□□□□ 0.16
VEGFA-209ENST00000425836 TEX43Q6ZNM6 134 aa16.06■□□□□ 0.16
VEGFA-209ENST00000425836 AMELXQ99217 191 aa16.06■□□□□ 0.16
VEGFA-209ENST00000425836 PMCHL1Q16048 86 aa16.05■□□□□ 0.16
VEGFA-209ENST00000425836 LINC00173Q6ZV60 143 aa16.05■□□□□ 0.16
VEGFA-209ENST00000425836 BAGE3Q86Y29 109 aa16.05■□□□□ 0.16
VEGFA-209ENST00000425836 CHCHD1Q96BP2 118 aaKnown RBP16.05■□□□□ 0.16
VEGFA-209ENST00000425836 VCX2Q9H322 139 aa16.05■□□□□ 0.16
VEGFA-209ENST00000425836 DNAH5Q8TE73 4624 aa16.05■□□□□ 0.16
VEGFA-209ENST00000425836 C16orf90A8MZG2 172 aa16.04■□□□□ 0.16
VEGFA-209ENST00000425836 C14orf177Q52M58 125 aa16.04■□□□□ 0.16
VEGFA-209ENST00000425836 NTN5Q8WTR8 489 aaPredicted RBP16.04■□□□□ 0.16
VEGFA-209ENST00000425836 HBDP02042 147 aa16.04■□□□□ 0.16
VEGFA-209ENST00000425836 CDPF1Q6NVV7 123 aa16.04■□□□□ 0.16
VEGFA-209ENST00000425836 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-209ENST00000425836 PAPPA-AS1Q5QFB9 102 aa16.03■□□□□ 0.16
VEGFA-209ENST00000425836 BIRC6Q9NR09 4857 aa16.02■□□□□ 0.16
VEGFA-209ENST00000425836 PRSS1P07477 247 aa16.02■□□□□ 0.16
VEGFA-209ENST00000425836 C2orf88Q9BSF0 95 aa16.02■□□□□ 0.16
VEGFA-209ENST00000425836 IGLV5-52A0A0A0MRZ9 124 aa16.01■□□□□ 0.15
VEGFA-209ENST00000425836 UBE2D1P51668 147 aa16■□□□□ 0.15
VEGFA-209ENST00000425836 CFAP161Q6P656 301 aa16■□□□□ 0.15
VEGFA-209ENST00000425836 C15orf56Q8N910 161 aa16■□□□□ 0.15
VEGFA-209ENST00000425836 PDZD11Q5EBL8 140 aa16■□□□□ 0.15
VEGFA-209ENST00000425836 LINC00242Q5T6M2 205 aa16■□□□□ 0.15
VEGFA-209ENST00000425836 COX7A2LO14548 114 aa15.99■□□□□ 0.15
VEGFA-209ENST00000425836 LRP1BQ9NZR2 4599 aa15.98■□□□□ 0.15
VEGFA-209ENST00000425836 LINC00310P59036 64 aa15.98■□□□□ 0.15
VEGFA-209ENST00000425836 C5orf38Q86SI9 138 aa15.98■□□□□ 0.15
VEGFA-209ENST00000425836 IGHV3OR16-9A0A0B4J2B5 98 aa15.97■□□□□ 0.15
VEGFA-209ENST00000425836 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms