RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 COX7A2LO14548 114 aa12.52□□□□□ -0.41
RARA-206ENST00000425707 SS18L2Q9UHA2 77 aa12.52□□□□□ -0.41
RARA-206ENST00000425707 SHISA2Q6UWI4 295 aa12.51□□□□□ -0.41
RARA-206ENST00000425707 Q6ZSV7 163 aa12.51□□□□□ -0.41
RARA-206ENST00000425707 VPREB3Q9UKI3 123 aa12.51□□□□□ -0.41
RARA-206ENST00000425707 CENPEQ02224 2701 aa12.5□□□□□ -0.41
RARA-206ENST00000425707 LINC01356Q8N9X3 169 aa12.5□□□□□ -0.41
RARA-206ENST00000425707 Q9UF83 564 aa12.5□□□□□ -0.41
RARA-206ENST00000425707 HTN1P15515 57 aa12.49□□□□□ -0.41
RARA-206ENST00000425707 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
RARA-206ENST00000425707 CCDC179H3BU77 68 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 TRACP01848 142 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 NPC2P61916 151 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 ZFHX3Q15911 3703 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 IGHV3OR16-12A0A075B7B8 117 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 DGAT2L7PQ6IED9 249 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 LINC00242Q5T6M2 205 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.48□□□□□ -0.41
RARA-206ENST00000425707 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 INSP01308 110 aa12.47□□□□□ -0.41
RARA-206ENST00000425707 HERV-K104P63124 156 aa12.47□□□□□ -0.41
RARA-206ENST00000425707 Q9H8V8 135 aa12.47□□□□□ -0.41
RARA-206ENST00000425707 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
RARA-206ENST00000425707 LINC01587Q99440 93 aa12.46□□□□□ -0.41
RARA-206ENST00000425707 COX6A2Q02221 97 aa12.46□□□□□ -0.42
RARA-206ENST00000425707 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.42
RARA-206ENST00000425707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.45□□□□□ -0.427e-7■■■■□ 25.6
RARA-206ENST00000425707 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 SMIM1B2RUZ4 78 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 Q6YL49 198 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
RARA-206ENST00000425707 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 CRYBG3Q68DQ2 2970 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 FSHBP01225 129 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 DAND5Q8N907 189 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 IL17DQ8TAD2 202 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 IGHV3-38A0A0C4DH36 116 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 PF4P02776 101 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 MAP1AP78559 2803 aaPredicted RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 Q8N2B8 174 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 ZNF843Q8N446 348 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 SLURP1P55000 103 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 DAZ2Q13117 558 aaKnown RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 DAZ4Q86SG3 579 aaKnown RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 LINC00643Q86TS7 51 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 DAZ3Q9NR90 486 aaKnown RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 A0A096LNT2 108 aa12.42□□□□□ -0.42
RARA-206ENST00000425707 SOSTDC1Q6X4U4 206 aa12.41□□□□□ -0.42
RARA-206ENST00000425707 PRM2P04554 102 aa12.41□□□□□ -0.42
RARA-206ENST00000425707 F5H768 121 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 C4orf3Q8WVX3 66 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 DOPEY1Q5JWR5 2465 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 ATP5G1P05496 136 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.43
RARA-206ENST00000425707 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.43
RARA-206ENST00000425707 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
RARA-206ENST00000425707 TMEM126AQ9H061 195 aa12.39□□□□□ -0.43
RARA-206ENST00000425707 FAM110AQ9BQ89 295 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 CDC42SE2Q9NRR3 84 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 INAFM2P0DMQ5 153 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 CXCL5P42830 114 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 OVOL2Q9BRP0 275 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
RARA-206ENST00000425707 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
RARA-206ENST00000425707 SORL1Q92673 2214 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 K7EQD1 137 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 KMT2BQ9UMN6 2715 aaPredicted RBP12.37□□□□□ -0.43
RARA-206ENST00000425707 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
RARA-206ENST00000425707 HIST2H2BCQ6DN03 193 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 HIST2H2BDQ6DRA6 164 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 DYNLRB2Q8TF09 96 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 BAALC-AS2P0C853 105 aa12.36□□□□□ -0.43
RARA-206ENST00000425707 NTM-AS1Q6ZSK4 140 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 POLQO75417 2590 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 DEFB136Q30KP8 78 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 CHCHD5Q9BSY4 110 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 C22orf24Q9Y442 160 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
RARA-206ENST00000425707 USP9YO00507 2555 aaPredicted RBP12.34□□□□□ -0.43
RARA-206ENST00000425707 C1orf158Q8N1D5 194 aa12.33□□□□□ -0.44
RARA-206ENST00000425707 SMCR5Q8TEV8 140 aa12.33□□□□□ -0.44
RARA-206ENST00000425707 TRAV13-1A0A0B4J241 112 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 FAM236AA0A1B0GUQ0 79 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 FAM236BA0A1B0GV22 79 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 ABCA12Q86UK0 2595 aa12.31□□□□□ -0.44
RARA-206ENST00000425707 CSPG4Q6UVK1 2322 aa12.31□□□□□ -0.44
RARA-206ENST00000425707 TENM4Q6N022 2769 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 FAM218AQ96MZ4 157 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 TMEM243Q9BU79 118 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms