RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 A0A087WX48 190 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGKV2-29A2NJV5 120 aaPredicted RBP4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TMEM262E9PQX1 116 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGHV3-30P01768 117 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGHV3-33P01772 117 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TRGC2P03986 189 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGHV3-30-3P0DP02 117 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 IGHV3-30-5P0DP03 117 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 BTF3P20290 206 aaKnown RBP4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 RAB5AP20339 215 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 PTTG1IPP53801 180 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 PKIAP61925 76 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 RBX1P62877 108 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TTC32Q5I0X7 151 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 MRPL52Q86TS9 123 aaKnown RBP4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 Q8N976 141 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 C18orf32Q8TCD1 76 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 URB1-AS1Q96HZ7 61 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 RYR2Q92736 4967 aa4.74□□□□□ -1.65
CHCHD3P1-201ENST00000425516 K7EMI3 77 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 RTL8CO15255 209 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 FGF6P10767 208 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 FCER1GP30273 86 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 LAGE3Q14657 143 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 ENHOQ6UWT2 76 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 Q6ZRN7 208 aaPredicted RBP4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 C10orf126Q8N4M7 172 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 FAM104AQ969W3 186 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 TIMM21Q9BVV7 248 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 PRR34Q9NV39 138 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 KLK12Q9UKR0 248 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 RYR3Q15413 4870 aa4.73□□□□□ -1.65
CHCHD3P1-201ENST00000425516 UBE2L6O14933 153 aa4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 ZNF25P17030 456 aaPredicted RBP4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 RPL39P62891 51 aaKnown RBP4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 C1orf134Q5TEV5 83 aa4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 C6orf223Q8N319 242 aa4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 PRSS3P2Q8NHM4 247 aa4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 CDC42SE2Q9NRR3 84 aa4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 UBE2D4Q9Y2X8 147 aa4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 CSDC2Q9Y534 153 aaKnown RBP4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 FAT2Q9NYQ8 4349 aa4.72□□□□□ -1.65
CHCHD3P1-201ENST00000425516 HECTD4Q9Y4D8 3996 aa4.71□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TRAV8-3A0A0A6YYJ7 113 aa4.71□□□□□ -1.66
CHCHD3P1-201ENST00000425516 ANGP03950 147 aaKnown RBP4.71□□□□□ -1.66
CHCHD3P1-201ENST00000425516 Q0VG73 95 aa4.71□□□□□ -1.66
CHCHD3P1-201ENST00000425516 ORMDL2Q53FV1 153 aa4.71□□□□□ -1.66
CHCHD3P1-201ENST00000425516 KRTAP26-1Q6PEX3 210 aa4.71□□□□□ -1.66
CHCHD3P1-201ENST00000425516 PYGO1Q9Y3Y4 419 aa4.71□□□□□ -1.66
CHCHD3P1-201ENST00000425516 A0A096LNJ9 63 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 LINC00614P0C842 121 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 MRPS36P82909 103 aaKnown RBP4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 REG3AQ06141 175 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 AMMECR1LQ6DCA0 310 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 RNASEKQ6P5S7 137 aaKnown RBP4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 C2orf66Q6UXQ4 117 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 NFE4Q86UQ8 179 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 ZNF664Q8N3J9 261 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 UBE2WQ96B02 151 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TMEM18Q96B42 140 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TOMM6Q96B49 74 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 KRTAP17-1Q9BYP8 105 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 SPANXA1Q9NS26 97 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 PKD1P98161 4303 aa4.7□□□□□ -1.66
CHCHD3P1-201ENST00000425516 DNAH11Q96DT5 4516 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 IGIPA6NJ69 53 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 RAB5BP61020 215 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 SMAGPQ0VAQ4 97 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 MIAQ16674 131 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 Q6ZUT4 128 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 FA2HQ7L5A8 372 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 MAPKAPK5-AS1Q8N8E1 139 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 OR5A1Q8NGJ0 315 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TMEM101Q96IK0 257 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 OPRPNQ99935 248 aaPredicted RBP4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 Q9HAA7 133 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 CYSLTR1Q9Y271 337 aa4.69□□□□□ -1.66
CHCHD3P1-201ENST00000425516 IGLV4-3A0A075B6K6 122 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TRAV8-4A0A0B4J246 113 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 LINC00959A0A1B0GUT2 108 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 LRCOL1A6NCL2 159 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 NUPR1O60356 82 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BKO60814 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BJP06899 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 NPSP0C0P6 89 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BOP23527 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 G0S2P27469 103 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BBP33778 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BDP58876 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BCP62807 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST2H2BEQ16778 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 PDZD11Q5EBL8 140 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 DGAT2L7PQ6IED9 249 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 CLPSL2Q6UWE3 100 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 LINC00336Q6ZUF6 198 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BHQ93079 126 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms