RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 BATFQ16520 125 aa10.97□□□□□ -0.65
SHOX2-202ENST00000425436 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
SHOX2-202ENST00000425436 DEFB131BA0A096LNP1 70 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 TRGV4A0A0C4DH28 118 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 LINC00612Q8N6U2 182 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 SLC25A29Q8N8R3 303 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 CHCHD7Q9BUK0 85 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 TIMM21Q9BVV7 248 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 HIGD1BQ9P298 99 aa10.96□□□□□ -0.65
SHOX2-202ENST00000425436 E9PLD3 99 aa10.95□□□□□ -0.66
SHOX2-202ENST00000425436 HINT1P49773 126 aaPredicted RBP10.95□□□□□ -0.66
SHOX2-202ENST00000425436 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
SHOX2-202ENST00000425436 NFE4Q86UQ8 179 aa10.95□□□□□ -0.66
SHOX2-202ENST00000425436 GTSF1LQ9H1H1 148 aa10.95□□□□□ -0.66
SHOX2-202ENST00000425436 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 TRAV10A0A0B4J240 114 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 C11orf86A6NJI1 115 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 UBE2D3P61077 147 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 UBE2D2P62837 147 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 C2orf91Q6ZV80 131 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 DEFB104AQ8WTQ1 72 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 DYNC2H1Q8NCM8 4307 aaKnown RBP10.94□□□□□ -0.66
SHOX2-202ENST00000425436 IGLV4-69A0A075B6H9 119 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 AMELXQ99217 191 aa10.94□□□□□ -0.66
SHOX2-202ENST00000425436 IGKV2D-26A0A0A0MRZ7 120 aa10.93□□□□□ -0.66
SHOX2-202ENST00000425436 NUPR2A6NF83 97 aa10.93□□□□□ -0.66
SHOX2-202ENST00000425436 MRPS36P82909 103 aaKnown RBP10.93□□□□□ -0.66
SHOX2-202ENST00000425436 HSD52Q0P140 79 aa10.93□□□□□ -0.66
SHOX2-202ENST00000425436 MPV17L2Q567V2 206 aa10.93□□□□□ -0.66
SHOX2-202ENST00000425436 Q9UF83 564 aa10.93□□□□□ -0.66
SHOX2-202ENST00000425436 UBE2D4Q9Y2X8 147 aa10.93□□□□□ -0.66
SHOX2-202ENST00000425436 IGLL5B9A064 214 aa10.92□□□□□ -0.66
SHOX2-202ENST00000425436 F5H768 121 aa10.92□□□□□ -0.66
SHOX2-202ENST00000425436 H7C423 109 aa10.92□□□□□ -0.66
SHOX2-202ENST00000425436 ATP5G1P05496 136 aa10.92□□□□□ -0.66
SHOX2-202ENST00000425436 FHL2Q14192 279 aa10.92□□□□□ -0.66
SHOX2-202ENST00000425436 BVES-AS1Q5T3Y7 98 aa10.92□□□□□ -0.66
SHOX2-202ENST00000425436 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
SHOX2-202ENST00000425436 A0A1B0GV90 55 aa10.91□□□□□ -0.66
SHOX2-202ENST00000425436 SEC11AP67812 179 aa10.91□□□□□ -0.66
SHOX2-202ENST00000425436 DGAT2L7PQ6IED9 249 aa10.91□□□□□ -0.66
SHOX2-202ENST00000425436 PLECQ15149 4684 aaKnown RBP10.91□□□□□ -0.66
SHOX2-202ENST00000425436 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 MYMXA0A1B0GTQ4 84 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 GAGE12JA6NER3 117 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 TCTAP57738 103 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 GAGE1Q13065 139 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 GAGE4Q13068 117 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 GAGE5Q13069 117 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 GAGE13Q4V321 117 aa10.9□□□□□ -0.66
SHOX2-202ENST00000425436 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.66
SHOX2-202ENST00000425436 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
SHOX2-202ENST00000425436 TAL2Q16559 108 aa10.89□□□□□ -0.67
SHOX2-202ENST00000425436 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
SHOX2-202ENST00000425436 NACAE9PAV3 2078 aa10.89□□□□□ -0.67
SHOX2-202ENST00000425436 OPRPNQ99935 248 aaPredicted RBP10.89□□□□□ -0.67
SHOX2-202ENST00000425436 CHAC1Q9BUX1 264 aa10.89□□□□□ -0.67
SHOX2-202ENST00000425436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
SHOX2-202ENST00000425436 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
SHOX2-202ENST00000425436 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
SHOX2-202ENST00000425436 A6NDN8 102 aa10.88□□□□□ -0.67
SHOX2-202ENST00000425436 LCE2BO14633 110 aa10.88□□□□□ -0.67
SHOX2-202ENST00000425436 TP73-AS1Q9UF72 201 aa10.88□□□□□ -0.67
SHOX2-202ENST00000425436 ORAOV1Q8WV07 137 aa10.87□□□□□ -0.67
SHOX2-202ENST00000425436 TMEM243Q9BU79 118 aa10.87□□□□□ -0.67
SHOX2-202ENST00000425436 PRO0255Q9UI72 69 aa10.87□□□□□ -0.67
SHOX2-202ENST00000425436 A0A0J9YY99 117 aa10.86□□□□□ -0.67
SHOX2-202ENST00000425436 UBE2L6O14933 153 aa10.86□□□□□ -0.67
SHOX2-202ENST00000425436 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
SHOX2-202ENST00000425436 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
SHOX2-202ENST00000425436 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
SHOX2-202ENST00000425436 TMEM223A0PJW6 202 aa10.85□□□□□ -0.67
SHOX2-202ENST00000425436 NTM-AS1Q6ZSK4 140 aa10.85□□□□□ -0.67
SHOX2-202ENST00000425436 FAM104AQ969W3 186 aa10.85□□□□□ -0.67
SHOX2-202ENST00000425436 PLEKHB2Q96CS7 222 aa10.85□□□□□ -0.67
SHOX2-202ENST00000425436 APLNQ9ULZ1 77 aa10.85□□□□□ -0.67
SHOX2-202ENST00000425436 A0A0J9YXV3 536 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 LEPROTO15243 131 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 LINC00694P0DN24 101 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
SHOX2-202ENST00000425436 ZNF25P17030 456 aaPredicted RBP10.84□□□□□ -0.67
SHOX2-202ENST00000425436 TIRAPP58753 221 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 AMMECR1LQ6DCA0 310 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 LYSTQ99698 3801 aa10.84□□□□□ -0.67
SHOX2-202ENST00000425436 LGALS3P17931 250 aaKnown RBP10.83□□□□□ -0.68
SHOX2-202ENST00000425436 Q6ZUT4 128 aa10.83□□□□□ -0.68
SHOX2-202ENST00000425436 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
SHOX2-202ENST00000425436 VSIG2Q96IQ7 327 aa10.83□□□□□ -0.68
SHOX2-202ENST00000425436 TTTY13Q9BZ97 58 aa10.83□□□□□ -0.68
SHOX2-202ENST00000425436 GEMIN7Q9H840 131 aaKnown RBP10.83□□□□□ -0.68
SHOX2-202ENST00000425436 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
SHOX2-202ENST00000425436 H3BRM9 83 aa10.82□□□□□ -0.68
SHOX2-202ENST00000425436 J3QQQ9 107 aa10.82□□□□□ -0.68
SHOX2-202ENST00000425436 UBE2D1P51668 147 aa10.82□□□□□ -0.68
SHOX2-202ENST00000425436 TM2D2Q9BX73 214 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms