RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
TMEM248-204ENST00000424964 CBLN2Q8IUK8 224 aa9.82□□□□□ -0.84
TMEM248-204ENST00000424964 ALKBH7Q9BT30 221 aaPredicted RBP9.82□□□□□ -0.84
TMEM248-204ENST00000424964 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
TMEM248-204ENST00000424964 CDC42SE2Q9NRR3 84 aa9.82□□□□□ -0.84
TMEM248-204ENST00000424964 UBE2D4Q9Y2X8 147 aa9.82□□□□□ -0.84
TMEM248-204ENST00000424964 C16orf90A8MZG2 172 aa9.81□□□□□ -0.84
TMEM248-204ENST00000424964 FUSP35637 526 aaKnown RBP eCLIP9.81□□□□□ -0.84
TMEM248-204ENST00000424964 IFI27P40305 119 aaPredicted RBP9.81□□□□□ -0.84
TMEM248-204ENST00000424964 WFDC2Q14508 124 aa9.81□□□□□ -0.84
TMEM248-204ENST00000424964 ZNF664Q8N3J9 261 aa9.81□□□□□ -0.84
TMEM248-204ENST00000424964 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
TMEM248-204ENST00000424964 Q8N814 137 aa9.8□□□□□ -0.84
TMEM248-204ENST00000424964 PRSS3P2Q8NHM4 247 aa9.8□□□□□ -0.84
TMEM248-204ENST00000424964 YPEL4Q96NS1 127 aa9.8□□□□□ -0.84
TMEM248-204ENST00000424964 TIMM21Q9BVV7 248 aa9.8□□□□□ -0.84
TMEM248-204ENST00000424964 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
TMEM248-204ENST00000424964 EPPK1P58107 5090 aaKnown RBP9.79□□□□□ -0.84
TMEM248-204ENST00000424964 ORMDL2Q53FV1 153 aa9.79□□□□□ -0.84
TMEM248-204ENST00000424964 KRTAP26-1Q6PEX3 210 aa9.79□□□□□ -0.84
TMEM248-204ENST00000424964 LINC00959A0A1B0GUT2 108 aa9.78□□□□□ -0.84
TMEM248-204ENST00000424964 K7EMI3 77 aa9.78□□□□□ -0.84
TMEM248-204ENST00000424964 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
TMEM248-204ENST00000424964 Q6ZUT4 128 aa9.78□□□□□ -0.84
TMEM248-204ENST00000424964 CHCHD10Q8WYQ3 142 aaPredicted RBP9.78□□□□□ -0.84
TMEM248-204ENST00000424964 SPANXA1Q9NS26 97 aa9.78□□□□□ -0.84
TMEM248-204ENST00000424964 HECTD4Q9Y4D8 3996 aa9.78□□□□□ -0.84
TMEM248-204ENST00000424964 PKD1P98161 4303 aa9.77□□□□□ -0.85
TMEM248-204ENST00000424964 GAGE12HA6NDE8 117 aa9.77□□□□□ -0.85
TMEM248-204ENST00000424964 SS18Q15532 418 aa9.77□□□□□ -0.85
TMEM248-204ENST00000424964 CYSLTR1Q9Y271 337 aa9.77□□□□□ -0.85
TMEM248-204ENST00000424964 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.76□□□□□ -0.85
TMEM248-204ENST00000424964 IGLV5-52A0A0A0MRZ9 124 aa9.76□□□□□ -0.85
TMEM248-204ENST00000424964 USP17L23D6RBM5 183 aa9.76□□□□□ -0.85
TMEM248-204ENST00000424964 G0S2P27469 103 aa9.76□□□□□ -0.85
TMEM248-204ENST00000424964 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
TMEM248-204ENST00000424964 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
TMEM248-204ENST00000424964 C2orf66Q6UXQ4 117 aa9.76□□□□□ -0.85
TMEM248-204ENST00000424964 FA2HQ7L5A8 372 aa9.76□□□□□ -0.85
TMEM248-204ENST00000424964 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
TMEM248-204ENST00000424964 CCL25O15444 150 aa9.75□□□□□ -0.85
TMEM248-204ENST00000424964 XCL1P47992 114 aa9.75□□□□□ -0.85
TMEM248-204ENST00000424964 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
TMEM248-204ENST00000424964 TRAV13-1A0A0B4J241 112 aa9.74□□□□□ -0.85
TMEM248-204ENST00000424964 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
TMEM248-204ENST00000424964 PYGO1Q9Y3Y4 419 aa9.74□□□□□ -0.85
TMEM248-204ENST00000424964 PKHD1P08F94 4074 aa9.73□□□□□ -0.85
TMEM248-204ENST00000424964 C1orf196B1AJZ1 125 aa9.73□□□□□ -0.85
TMEM248-204ENST00000424964 C18orf32Q8TCD1 76 aa9.73□□□□□ -0.85
TMEM248-204ENST00000424964 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
TMEM248-204ENST00000424964 GCSHP23434 173 aa9.72□□□□□ -0.85
TMEM248-204ENST00000424964 FOXI1Q12951 378 aa9.72□□□□□ -0.85
TMEM248-204ENST00000424964 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
TMEM248-204ENST00000424964 TMEM141Q96I45 108 aa9.72□□□□□ -0.85
TMEM248-204ENST00000424964 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.86
TMEM248-204ENST00000424964 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
TMEM248-204ENST00000424964 IFITM10A6NMD0 228 aa9.71□□□□□ -0.86
TMEM248-204ENST00000424964 SCO1O75880 301 aa9.71□□□□□ -0.86
TMEM248-204ENST00000424964 CFAP161Q6P656 301 aa9.71□□□□□ -0.86
TMEM248-204ENST00000424964 CD164L2Q6UWJ8 174 aa9.71□□□□□ -0.86
TMEM248-204ENST00000424964 Q6ZN92 141 aa9.71□□□□□ -0.86
TMEM248-204ENST00000424964 PRSS1P07477 247 aa9.7□□□□□ -0.86
TMEM248-204ENST00000424964 LINC00614P0C842 121 aa9.7□□□□□ -0.86
TMEM248-204ENST00000424964 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
TMEM248-204ENST00000424964 AP5S1Q9NUS5 200 aa9.7□□□□□ -0.86
TMEM248-204ENST00000424964 hDV102S1A0JD36 115 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 IGIPA6NJ69 53 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 COLCA2A8K830 154 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 TRGC2P03986 189 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 RAB5BP61020 215 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 TEX43Q6ZNM6 134 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 VCX2Q9H322 139 aa9.69□□□□□ -0.86
TMEM248-204ENST00000424964 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
TMEM248-204ENST00000424964 NPSP0C0P6 89 aa9.68□□□□□ -0.86
TMEM248-204ENST00000424964 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
TMEM248-204ENST00000424964 ERASQ7Z444 233 aa9.68□□□□□ -0.86
TMEM248-204ENST00000424964 C2orf88Q9BSF0 95 aa9.68□□□□□ -0.86
TMEM248-204ENST00000424964 COX7A2LO14548 114 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 MALP21145 153 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 TIMM17AQ99595 171 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 BIRC6Q9NR09 4857 aa9.67□□□□□ -0.86
TMEM248-204ENST00000424964 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
TMEM248-204ENST00000424964 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
TMEM248-204ENST00000424964 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
TMEM248-204ENST00000424964 AMELXQ99217 191 aa9.65□□□□□ -0.86
TMEM248-204ENST00000424964 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
TMEM248-204ENST00000424964 UBE2D1P51668 147 aa9.64□□□□□ -0.87
TMEM248-204ENST00000424964 PMCHL1Q16048 86 aa9.64□□□□□ -0.87
TMEM248-204ENST00000424964 LINC00173Q6ZV60 143 aa9.64□□□□□ -0.87
TMEM248-204ENST00000424964 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
TMEM248-204ENST00000424964 HBDP02042 147 aa9.63□□□□□ -0.87
TMEM248-204ENST00000424964 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
TMEM248-204ENST00000424964 CHCHD1Q96BP2 118 aaKnown RBP9.63□□□□□ -0.87
TMEM248-204ENST00000424964 A0A096LNJ9 63 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9348.9 ms