RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 Q8N3U1 123 aa6.73□□□□□ -1.33
ECHDC3-203ENST00000422887 PRR34Q9NV39 138 aa6.73□□□□□ -1.33
ECHDC3-203ENST00000422887 KLK12Q9UKR0 248 aa6.73□□□□□ -1.33
ECHDC3-203ENST00000422887 COX11Q9Y6N1 276 aa6.73□□□□□ -1.33
ECHDC3-203ENST00000422887 LINC00614P0C842 121 aa6.72□□□□□ -1.33
ECHDC3-203ENST00000422887 C2orf66Q6UXQ4 117 aa6.72□□□□□ -1.33
ECHDC3-203ENST00000422887 UBE2WQ96B02 151 aa6.72□□□□□ -1.33
ECHDC3-203ENST00000422887 CHCHD1Q96BP2 118 aaKnown RBP6.72□□□□□ -1.33
ECHDC3-203ENST00000422887 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
ECHDC3-203ENST00000422887 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
ECHDC3-203ENST00000422887 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.34
ECHDC3-203ENST00000422887 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.34
ECHDC3-203ENST00000422887 MRPS36P82909 103 aaKnown RBP6.71□□□□□ -1.34
ECHDC3-203ENST00000422887 REG3AQ06141 175 aa6.71□□□□□ -1.34
ECHDC3-203ENST00000422887 LINC00269Q8N2A0 174 aa6.71□□□□□ -1.34
ECHDC3-203ENST00000422887 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 Q6ZN92 141 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 LINC00336Q6ZUF6 198 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 BAGE3Q86Y29 109 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 ZNF664Q8N3J9 261 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 TOMM6Q96B49 74 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 TIMM17AQ99595 171 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 C1orf43Q9BWL3 253 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 Q9HAA7 133 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 CDC42SE2Q9NRR3 84 aa6.7□□□□□ -1.34
ECHDC3-203ENST00000422887 CCL25O15444 150 aa6.69□□□□□ -1.34
ECHDC3-203ENST00000422887 HBDP02042 147 aa6.69□□□□□ -1.34
ECHDC3-203ENST00000422887 ENHOQ6UWT2 76 aa6.69□□□□□ -1.34
ECHDC3-203ENST00000422887 Q6ZRN7 208 aaPredicted RBP6.69□□□□□ -1.34
ECHDC3-203ENST00000422887 URB1-AS1Q96HZ7 61 aa6.69□□□□□ -1.34
ECHDC3-203ENST00000422887 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
ECHDC3-203ENST00000422887 IGKV2D-24A0A075B6R9 120 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 C1orf196B1AJZ1 125 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 PSCAO43653 123 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 HSBP1O75506 76 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 CLPSL2Q6UWE3 100 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 Q6ZUT4 128 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 ERASQ7Z444 233 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 TMEM141Q96I45 108 aa6.68□□□□□ -1.34
ECHDC3-203ENST00000422887 IGLV4-3A0A075B6K6 122 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 IGIPA6NJ69 53 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 RTL8CO15255 209 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BKO60814 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BJP06899 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BOP23527 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BBP33778 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BDP58876 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BCP62807 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST2H2BEQ16778 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 TEX43Q6ZNM6 134 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BHQ93079 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BNQ99877 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 HIST1H2BMQ99879 126 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 C2orf88Q9BSF0 95 aa6.67□□□□□ -1.34
ECHDC3-203ENST00000422887 ATP5LO75964 103 aa6.66□□□□□ -1.34
ECHDC3-203ENST00000422887 SS18Q15532 418 aa6.66□□□□□ -1.34
ECHDC3-203ENST00000422887 SCGB3A1Q96QR1 104 aa6.66□□□□□ -1.34
ECHDC3-203ENST00000422887 A0A096LNJ9 63 aa6.65□□□□□ -1.34
ECHDC3-203ENST00000422887 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
ECHDC3-203ENST00000422887 IFITM10A6NMD0 228 aa6.65□□□□□ -1.34
ECHDC3-203ENST00000422887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.65□□□□□ -1.34
ECHDC3-203ENST00000422887 SERF1AO75920 110 aa6.65□□□□□ -1.34
ECHDC3-203ENST00000422887 AMELXQ99217 191 aa6.65□□□□□ -1.34
ECHDC3-203ENST00000422887 VCX2Q9H322 139 aa6.65□□□□□ -1.34
ECHDC3-203ENST00000422887 IGKV3OR2-268A0A0C4DH90 116 aa6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 PRSS29PA6NIE9 313 aa6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 EREGO14944 169 aa6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 PDZD11Q5EBL8 140 aa6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 COA6Q5JTJ3 125 aaKnown RBP6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 CHCHD10Q8WYQ3 142 aaPredicted RBP6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 FAM104AQ969W3 186 aa6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 BIRC6Q9NR09 4857 aa6.64□□□□□ -1.35
ECHDC3-203ENST00000422887 IGLV10-54A0A075B6I4 117 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 TRAV13-1A0A0B4J241 112 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 LINC00310P59036 64 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 SEC11AP67812 179 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 RNASE13Q5GAN3 156 aaKnown RBP6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 CD164L2Q6UWJ8 174 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 OPRPNQ99935 248 aaPredicted RBP6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
ECHDC3-203ENST00000422887 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 A0A087WTM6 91 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 GAGE12HA6NDE8 117 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 LEPROTL1O95214 131 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 XCL1P47992 114 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 UBE2D1P51668 147 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 TNP2Q05952 138 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 PMVKQ15126 192 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 LINC00173Q6ZV60 143 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 BAALCQ8WXS3 180 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 HSPB8Q9UJY1 196 aa6.62□□□□□ -1.35
ECHDC3-203ENST00000422887 LRCOL1A6NCL2 159 aa6.61□□□□□ -1.35
ECHDC3-203ENST00000422887 FOXI1Q12951 378 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms