RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 IFI27P40305 119 aaPredicted RBP6.21□□□□□ -1.42
PDGFC-202ENST00000422544 LAGE3Q14657 143 aa6.21□□□□□ -1.42
PDGFC-202ENST00000422544 CLPSL2Q6UWE3 100 aa6.21□□□□□ -1.42
PDGFC-202ENST00000422544 ENHOQ6UWT2 76 aa6.21□□□□□ -1.42
PDGFC-202ENST00000422544 Q6ZRN7 208 aaPredicted RBP6.21□□□□□ -1.42
PDGFC-202ENST00000422544 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
PDGFC-202ENST00000422544 Q8N8P6 123 aa6.21□□□□□ -1.42
PDGFC-202ENST00000422544 LINC00336Q6ZUF6 198 aa6.2□□□□□ -1.42
PDGFC-202ENST00000422544 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 COLCA2A8K830 154 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 CRPP02741 224 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 RPL39P62891 51 aaKnown RBP6.19□□□□□ -1.42
PDGFC-202ENST00000422544 REG3AQ06141 175 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 Q0VG73 95 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 OR5A1Q8NGJ0 315 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 TMEM18Q96B42 140 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 TMEM101Q96IK0 257 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 NXT2Q9NPJ8 142 aaKnown RBP6.19□□□□□ -1.42
PDGFC-202ENST00000422544 PRR34Q9NV39 138 aa6.19□□□□□ -1.42
PDGFC-202ENST00000422544 IGKV2D-24A0A075B6R9 120 aa6.18□□□□□ -1.42
PDGFC-202ENST00000422544 IGKV3OR2-268A0A0C4DH90 116 aa6.18□□□□□ -1.42
PDGFC-202ENST00000422544 PSCAO43653 123 aa6.18□□□□□ -1.42
PDGFC-202ENST00000422544 ZNF25P17030 456 aaPredicted RBP6.18□□□□□ -1.42
PDGFC-202ENST00000422544 DGAT2L7PQ6IED9 249 aa6.18□□□□□ -1.42
PDGFC-202ENST00000422544 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
PDGFC-202ENST00000422544 TM2D2Q9BX73 214 aa6.18□□□□□ -1.42
PDGFC-202ENST00000422544 CDC42SE2Q9NRR3 84 aa6.18□□□□□ -1.42
PDGFC-202ENST00000422544 UBE2D4Q9Y2X8 147 aa6.18□□□□□ -1.42
PDGFC-202ENST00000422544 ATP6V1G1O75348 118 aa6.17□□□□□ -1.42
PDGFC-202ENST00000422544 TRGC2P03986 189 aa6.17□□□□□ -1.42
PDGFC-202ENST00000422544 MIAQ16674 131 aa6.17□□□□□ -1.42
PDGFC-202ENST00000422544 ZNF664Q8N3J9 261 aa6.17□□□□□ -1.42
PDGFC-202ENST00000422544 MAPKAPK5-AS1Q8N8E1 139 aa6.17□□□□□ -1.42
PDGFC-202ENST00000422544 RMI2Q96E14 147 aa6.17□□□□□ -1.42
PDGFC-202ENST00000422544 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
PDGFC-202ENST00000422544 IGLV10-54A0A075B6I4 117 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 K7EMI3 77 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 S100A1P23297 94 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 SMAGPQ0VAQ4 97 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 ORMDL2Q53FV1 153 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 RNASE13Q5GAN3 156 aaKnown RBP6.16□□□□□ -1.42
PDGFC-202ENST00000422544 FA2HQ7L5A8 372 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 C18orf32Q8TCD1 76 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 OPRPNQ99935 248 aaPredicted RBP6.16□□□□□ -1.42
PDGFC-202ENST00000422544 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 CSDC2Q9Y534 153 aaKnown RBP6.16□□□□□ -1.42
PDGFC-202ENST00000422544 COX11Q9Y6N1 276 aa6.16□□□□□ -1.42
PDGFC-202ENST00000422544 A0A087WTM6 91 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 TRAV8-4A0A0B4J246 113 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 A0A1B0GVY2 172 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 LINC01546A6NGU7 62 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 KRTAP26-1Q6PEX3 210 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 Q6ZUT4 128 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 BAALCQ8WXS3 180 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 FAM104AQ969W3 186 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 SPANXA1Q9NS26 97 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 CYSLTR1Q9Y271 337 aa6.15□□□□□ -1.42
PDGFC-202ENST00000422544 LINC00959A0A1B0GUT2 108 aa6.14□□□□□ -1.43
PDGFC-202ENST00000422544 LECT2O14960 151 aa6.14□□□□□ -1.43
PDGFC-202ENST00000422544 LINC00614P0C842 121 aa6.14□□□□□ -1.43
PDGFC-202ENST00000422544 WFDC2Q14508 124 aa6.14□□□□□ -1.43
PDGFC-202ENST00000422544 URB1-AS1Q96HZ7 61 aa6.14□□□□□ -1.43
PDGFC-202ENST00000422544 GAGE12HA6NDE8 117 aa6.13□□□□□ -1.43
PDGFC-202ENST00000422544 EREGO14944 169 aa6.13□□□□□ -1.43
PDGFC-202ENST00000422544 G0S2P27469 103 aa6.13□□□□□ -1.43
PDGFC-202ENST00000422544 FUSP35637 526 aaKnown RBP eCLIP6.13□□□□□ -1.43
PDGFC-202ENST00000422544 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
PDGFC-202ENST00000422544 CHCHD10Q8WYQ3 142 aaPredicted RBP6.13□□□□□ -1.43
PDGFC-202ENST00000422544 TOMM6Q96B49 74 aa6.13□□□□□ -1.43
PDGFC-202ENST00000422544 AP5S1Q9NUS5 200 aa6.13□□□□□ -1.43
PDGFC-202ENST00000422544 PYGO1Q9Y3Y4 419 aa6.13□□□□□ -1.43
PDGFC-202ENST00000422544 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
PDGFC-202ENST00000422544 IGLV4-3A0A075B6K6 122 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 XCL1P47992 114 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 KRTAP10-2P60368 255 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 RAB5BP61020 215 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 SS18Q15532 418 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 PMCHL1Q16048 86 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 SPATA12Q7Z6I5 190 aa6.12□□□□□ -1.43
PDGFC-202ENST00000422544 CCL25O15444 150 aa6.11□□□□□ -1.43
PDGFC-202ENST00000422544 ZC2HC1BQ5TFG8 222 aa6.11□□□□□ -1.43
PDGFC-202ENST00000422544 BAGE3Q86Y29 109 aa6.11□□□□□ -1.43
PDGFC-202ENST00000422544 Q8N814 137 aa6.11□□□□□ -1.43
PDGFC-202ENST00000422544 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
PDGFC-202ENST00000422544 SCGB3A1Q96QR1 104 aa6.11□□□□□ -1.43
PDGFC-202ENST00000422544 VCX2Q9H322 139 aa6.11□□□□□ -1.43
PDGFC-202ENST00000422544 A0A096LNJ9 63 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 IFITM10A6NMD0 228 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 USP17L23D6RBM5 183 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 FOXI1Q12951 378 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 Q6ZN92 141 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 TEX43Q6ZNM6 134 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 ERASQ7Z444 233 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms