RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 Q8N814 137 aa10.44□□□□□ -0.74
BRAT1-202ENST00000421712 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
BRAT1-202ENST00000421712 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
BRAT1-202ENST00000421712 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
BRAT1-202ENST00000421712 Q8N8P6 123 aa10.43□□□□□ -0.74
BRAT1-202ENST00000421712 TRAPPC1Q9Y5R8 145 aa10.43□□□□□ -0.74
BRAT1-202ENST00000421712 RPL39P62891 51 aaKnown RBP10.42□□□□□ -0.74
BRAT1-202ENST00000421712 WFDC2Q14508 124 aa10.42□□□□□ -0.74
BRAT1-202ENST00000421712 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
BRAT1-202ENST00000421712 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
BRAT1-202ENST00000421712 UBE2D4Q9Y2X8 147 aa10.42□□□□□ -0.74
BRAT1-202ENST00000421712 HECTD4Q9Y4D8 3996 aa10.42□□□□□ -0.74
BRAT1-202ENST00000421712 PKD1P98161 4303 aa10.42□□□□□ -0.74
BRAT1-202ENST00000421712 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.41□□□□□ -0.74
BRAT1-202ENST00000421712 IFI27P40305 119 aaPredicted RBP10.41□□□□□ -0.74
BRAT1-202ENST00000421712 CDPF1Q6NVV7 123 aa10.41□□□□□ -0.74
BRAT1-202ENST00000421712 PRSS3P2Q8NHM4 247 aa10.41□□□□□ -0.74
BRAT1-202ENST00000421712 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
BRAT1-202ENST00000421712 SMCO4Q9NRQ5 59 aa10.41□□□□□ -0.74
BRAT1-202ENST00000421712 IGLV5-52A0A0A0MRZ9 124 aa10.4□□□□□ -0.74
BRAT1-202ENST00000421712 C14orf177Q52M58 125 aa10.4□□□□□ -0.74
BRAT1-202ENST00000421712 RNASE13Q5GAN3 156 aaKnown RBP10.4□□□□□ -0.74
BRAT1-202ENST00000421712 CSDC2Q9Y534 153 aaKnown RBP10.4□□□□□ -0.74
BRAT1-202ENST00000421712 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
BRAT1-202ENST00000421712 USP17L23D6RBM5 183 aa10.39□□□□□ -0.75
BRAT1-202ENST00000421712 SS18Q15532 418 aa10.39□□□□□ -0.75
BRAT1-202ENST00000421712 ORMDL2Q53FV1 153 aa10.39□□□□□ -0.75
BRAT1-202ENST00000421712 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
BRAT1-202ENST00000421712 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
BRAT1-202ENST00000421712 ALKBH7Q9BT30 221 aaPredicted RBP10.39□□□□□ -0.75
BRAT1-202ENST00000421712 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
BRAT1-202ENST00000421712 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
BRAT1-202ENST00000421712 KRTAP26-1Q6PEX3 210 aa10.38□□□□□ -0.75
BRAT1-202ENST00000421712 CBLN2Q8IUK8 224 aa10.38□□□□□ -0.75
BRAT1-202ENST00000421712 SPANXA1Q9NS26 97 aa10.38□□□□□ -0.75
BRAT1-202ENST00000421712 PKHD1P08F94 4074 aa10.38□□□□□ -0.75
BRAT1-202ENST00000421712 DNAH11Q96DT5 4516 aa10.38□□□□□ -0.75
BRAT1-202ENST00000421712 K7EMI3 77 aa10.37□□□□□ -0.75
BRAT1-202ENST00000421712 XCL1P47992 114 aa10.37□□□□□ -0.75
BRAT1-202ENST00000421712 Q6ZUT4 128 aa10.37□□□□□ -0.75
BRAT1-202ENST00000421712 TRAV13-1A0A0B4J241 112 aa10.36□□□□□ -0.75
BRAT1-202ENST00000421712 CCL25O15444 150 aa10.36□□□□□ -0.75
BRAT1-202ENST00000421712 GCSHP23434 173 aa10.36□□□□□ -0.75
BRAT1-202ENST00000421712 G0S2P27469 103 aa10.36□□□□□ -0.75
BRAT1-202ENST00000421712 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
BRAT1-202ENST00000421712 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
BRAT1-202ENST00000421712 FA2HQ7L5A8 372 aa10.35□□□□□ -0.75
BRAT1-202ENST00000421712 OPRPNQ99935 248 aaPredicted RBP10.35□□□□□ -0.75
BRAT1-202ENST00000421712 CFAP161Q6P656 301 aa10.34□□□□□ -0.75
BRAT1-202ENST00000421712 YPEL4Q96NS1 127 aa10.34□□□□□ -0.75
BRAT1-202ENST00000421712 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
BRAT1-202ENST00000421712 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
BRAT1-202ENST00000421712 MRPS36P82909 103 aaKnown RBP10.33□□□□□ -0.76
BRAT1-202ENST00000421712 IFITM10A6NMD0 228 aa10.32□□□□□ -0.76
BRAT1-202ENST00000421712 PRSS1P07477 247 aa10.32□□□□□ -0.76
BRAT1-202ENST00000421712 FOXI1Q12951 378 aa10.32□□□□□ -0.76
BRAT1-202ENST00000421712 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
BRAT1-202ENST00000421712 Q6ZN92 141 aa10.32□□□□□ -0.76
BRAT1-202ENST00000421712 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
BRAT1-202ENST00000421712 PYGO1Q9Y3Y4 419 aa10.32□□□□□ -0.76
BRAT1-202ENST00000421712 DYNC1H1Q14204 4646 aaKnown RBP10.32□□□□□ -0.76
BRAT1-202ENST00000421712 KRTAP10-1P60331 282 aa10.31□□□□□ -0.76
BRAT1-202ENST00000421712 AP5S1Q9NUS5 200 aa10.31□□□□□ -0.76
BRAT1-202ENST00000421712 IGLV4-3A0A075B6K6 122 aa10.3□□□□□ -0.76
BRAT1-202ENST00000421712 TEX43Q6ZNM6 134 aa10.3□□□□□ -0.76
BRAT1-202ENST00000421712 VCX2Q9H322 139 aa10.3□□□□□ -0.76
BRAT1-202ENST00000421712 MALP21145 153 aa10.29□□□□□ -0.76
BRAT1-202ENST00000421712 HIGD2BQ4VC39 106 aa10.29□□□□□ -0.76
BRAT1-202ENST00000421712 C18orf32Q8TCD1 76 aa10.29□□□□□ -0.76
BRAT1-202ENST00000421712 FAM104AQ969W3 186 aa10.29□□□□□ -0.76
BRAT1-202ENST00000421712 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
BRAT1-202ENST00000421712 SCGB3A1Q96QR1 104 aa10.29□□□□□ -0.76
BRAT1-202ENST00000421712 C2orf88Q9BSF0 95 aa10.29□□□□□ -0.76
BRAT1-202ENST00000421712 COX7A2LO14548 114 aa10.28□□□□□ -0.76
BRAT1-202ENST00000421712 LINC00614P0C842 121 aa10.28□□□□□ -0.76
BRAT1-202ENST00000421712 RAB5BP61020 215 aa10.28□□□□□ -0.76
BRAT1-202ENST00000421712 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
BRAT1-202ENST00000421712 HERC2O95714 4834 aa10.27□□□□□ -0.76
BRAT1-202ENST00000421712 IGHV1-58A0A0C4DH39 117 aa10.27□□□□□ -0.77
BRAT1-202ENST00000421712 LINC01546A6NGU7 62 aa10.27□□□□□ -0.77
BRAT1-202ENST00000421712 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
BRAT1-202ENST00000421712 PAPPA-AS1Q5QFB9 102 aa10.27□□□□□ -0.77
BRAT1-202ENST00000421712 C5orf38Q86SI9 138 aa10.27□□□□□ -0.77
BRAT1-202ENST00000421712 C15orf56Q8N910 161 aa10.27□□□□□ -0.77
BRAT1-202ENST00000421712 LINC01549A6NIU2 74 aa10.26□□□□□ -0.77
BRAT1-202ENST00000421712 TRGC2P03986 189 aa10.26□□□□□ -0.77
BRAT1-202ENST00000421712 NPSP0C0P6 89 aa10.26□□□□□ -0.77
BRAT1-202ENST00000421712 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
BRAT1-202ENST00000421712 PCLOQ9Y6V0 5065 aa10.26□□□□□ -0.77
BRAT1-202ENST00000421712 DNAH5Q8TE73 4624 aa10.25□□□□□ -0.77
BRAT1-202ENST00000421712 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.25□□□□□ -0.77
BRAT1-202ENST00000421712 SCO1O75880 301 aa10.25□□□□□ -0.77
BRAT1-202ENST00000421712 CDK2AP2O75956 126 aa10.25□□□□□ -0.77
BRAT1-202ENST00000421712 ERASQ7Z444 233 aa10.25□□□□□ -0.77
BRAT1-202ENST00000421712 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
BRAT1-202ENST00000421712 LRP1BQ9NZR2 4599 aa10.24□□□□□ -0.77
BRAT1-202ENST00000421712 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
BRAT1-202ENST00000421712 APOMO95445 188 aa10.24□□□□□ -0.77
BRAT1-202ENST00000421712 RYR1P21817 5038 aa10.24□□□□□ -0.77
BRAT1-202ENST00000421712 COLCA2A8K830 154 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms