RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CTRLP40313 264 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 CENPWQ5EE01 88 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 RNASEKQ6P5S7 137 aaKnown RBP6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 TEX261Q6UWH6 196 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 GATD1Q8NB37 220 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 SFT2D1Q8WV19 159 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 TRAV26-2A0A0B4J265 109 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 A0A0U1RQV1 116 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 LOC107984640A0A0U1RRK4 108 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 A0A1B0GV50 99 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 APCSP02743 223 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 MT-ND6P03923 174 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 CAMPP49913 170 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 LYZL1Q6UWQ5 148 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 FAM213BQ8TBF2 198 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 CNFNQ9BYD5 112 aa6.19□□□□□ -1.42
TNFAIP3-202ENST00000420009 XKRY2A2RUG3 117 aa6.18□□□□□ -1.42
TNFAIP3-202ENST00000420009 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
TNFAIP3-202ENST00000420009 C9orf116Q5BN46 136 aaPredicted RBP6.18□□□□□ -1.42
TNFAIP3-202ENST00000420009 RPL39LQ96EH5 51 aaKnown RBP6.18□□□□□ -1.42
TNFAIP3-202ENST00000420009 SMIM12Q96EX1 92 aa6.18□□□□□ -1.42
TNFAIP3-202ENST00000420009 UMAD1C9J7I0 102 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 ZNF561-AS1K7EIQ3 104 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 IFNA1P01562 189 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 BCL2P10415 239 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 C1orf137Q5JT78 98 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 CD164L2Q6UWJ8 174 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 ALKAL2Q6UX46 152 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 DIRC1Q969H9 104 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
TNFAIP3-202ENST00000420009 IGLV4-69A0A075B6H9 119 aa6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 APOMO95445 188 aa6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 IGLV7-43P04211 117 aa6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 ESDP10768 282 aa6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 MEF2BQ02080 365 aaPredicted RBP6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 PHF5AQ7RTV0 110 aaKnown RBP6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 ISOC2Q96AB3 205 aa6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 BTF3L4Q96K17 158 aa6.16□□□□□ -1.42
TNFAIP3-202ENST00000420009 TRBV20OR9-2A0A075B6H5 130 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 IGLV1-50A0A075B6I6 118 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 SDHAF1A6NFY7 115 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 H0Y9J4 135 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 GNG4P50150 75 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 CCL20P78556 96 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 TWIST1Q15672 202 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 TMEM101Q96IK0 257 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 MANBALQ9NQG1 85 aa6.15□□□□□ -1.42
TNFAIP3-202ENST00000420009 RAB19A4D1S5 217 aa6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 EIF5AP63241 154 aaKnown RBP6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 SS18Q15532 418 aa6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 PRR4Q16378 134 aa6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 CLLU1Q5K131 121 aa6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 EIF5AL1Q6IS14 154 aaKnown RBP6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 MRPL52Q86TS9 123 aaKnown RBP6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 CDC42SE2Q9NRR3 84 aa6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 GNG13Q9P2W3 67 aa6.14□□□□□ -1.43
TNFAIP3-202ENST00000420009 TRBV6-5A0A0K0K1A5 114 aa6.13□□□□□ -1.43
TNFAIP3-202ENST00000420009 I3L3M4 83 aa6.13□□□□□ -1.43
TNFAIP3-202ENST00000420009 TSHBP01222 138 aa6.13□□□□□ -1.43
TNFAIP3-202ENST00000420009 KRTAP11-1Q8IUC1 163 aa6.13□□□□□ -1.43
TNFAIP3-202ENST00000420009 MRAP2Q96G30 205 aa6.13□□□□□ -1.43
TNFAIP3-202ENST00000420009 C2orf48Q96LS8 159 aa6.13□□□□□ -1.43
TNFAIP3-202ENST00000420009 CAMK2N2Q96S95 79 aa6.13□□□□□ -1.43
TNFAIP3-202ENST00000420009 LINC00862A6NCI5 91 aa6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 COX7A2LO14548 114 aa6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 FOXA3P55318 350 aaPredicted RBP6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 RPL18AQ02543 176 aaKnown RBP6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 NUDT10Q8NFP7 164 aa6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 NUDT11Q96G61 164 aa6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 FAM210AQ96ND0 272 aa6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 BIN3Q9NQY0 253 aa6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 TMEM242Q9NWH2 141 aa6.12□□□□□ -1.43
TNFAIP3-202ENST00000420009 TRAV1-1A0A0B4J248 108 aa6.11□□□□□ -1.43
TNFAIP3-202ENST00000420009 PMCHP20382 165 aa6.11□□□□□ -1.43
TNFAIP3-202ENST00000420009 MALP21145 153 aa6.11□□□□□ -1.43
TNFAIP3-202ENST00000420009 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
TNFAIP3-202ENST00000420009 RPP21Q9H633 154 aaKnown RBP6.11□□□□□ -1.43
TNFAIP3-202ENST00000420009 MUC17Q685J3 4493 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 A0A087WZ39 114 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 PDE6DO43924 150 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 RPL13AP40429 203 aaKnown RBP6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 RNF151Q2KHN1 245 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 TSKUQ8WUA8 353 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 OPRPNQ99935 248 aaPredicted RBP6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 RNASE7Q9H1E1 156 aaKnown RBP6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 MED9Q9NWA0 146 aa6.1□□□□□ -1.43
TNFAIP3-202ENST00000420009 TRBV27A0A0K0K1C4 114 aa6.09□□□□□ -1.43
TNFAIP3-202ENST00000420009 FAM168BA1KXE4 195 aa6.09□□□□□ -1.43
TNFAIP3-202ENST00000420009 C7orf77A4D0Y5 90 aa6.09□□□□□ -1.43
TNFAIP3-202ENST00000420009 UBE2D1P51668 147 aa6.09□□□□□ -1.43
TNFAIP3-202ENST00000420009 RAB14P61106 215 aa6.09□□□□□ -1.43
TNFAIP3-202ENST00000420009 SPAG11BQ08648 103 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms