RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 ATXN8Q156A1 80 aa9.37□□□□□ -0.91
LINC00642-201ENST00000419459 KIR2DL4Q99706 377 aa9.37□□□□□ -0.91
LINC00642-201ENST00000419459 A0A0J9YX75 114 aa9.36□□□□□ -0.91
LINC00642-201ENST00000419459 C9JAW5 83 aa9.36□□□□□ -0.91
LINC00642-201ENST00000419459 NDUFV3P56181 108 aaKnown RBP9.36□□□□□ -0.91
LINC00642-201ENST00000419459 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
LINC00642-201ENST00000419459 FAM19A4Q96LR4 140 aa9.36□□□□□ -0.91
LINC00642-201ENST00000419459 NHLRC4P0CG21 123 aaPredicted RBP9.36□□□□□ -0.91
LINC00642-201ENST00000419459 Q6ZQT7 251 aa9.36□□□□□ -0.91
LINC00642-201ENST00000419459 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 LEPROTO15243 131 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE7O76087 117 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 EGFEM1PQ0D2K5 195 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE4Q13068 117 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 ANXA2RQ3ZCQ2 193 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 TMEM170BQ5T4T1 132 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 KIF25-AS1Q9Y6Z4 181 aa9.35□□□□□ -0.91
LINC00642-201ENST00000419459 TRBV6-5A0A0K0K1A5 114 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 A4D1N5 150 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 RBMY1BA6NDE4 496 aaKnown RBP9.34□□□□□ -0.91
LINC00642-201ENST00000419459 RBMY1EA6NEQ0 496 aaKnown RBP9.34□□□□□ -0.91
LINC00642-201ENST00000419459 H3BMM0 161 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 RBMY1DP0C7P1 496 aaKnown RBP9.34□□□□□ -0.91
LINC00642-201ENST00000419459 IFITM1P13164 125 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 Q8N1Y9 231 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 MEGF8Q7Z7M0 2845 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 TRBV27A0A0K0K1C4 114 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 SDHAF1A6NFY7 115 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
LINC00642-201ENST00000419459 LINC00315P59091 139 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 STHQ8IWL8 128 aa9.34□□□□□ -0.91
LINC00642-201ENST00000419459 TRAV12-2A0A075B6T6 113 aa9.33□□□□□ -0.92
LINC00642-201ENST00000419459 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
LINC00642-201ENST00000419459 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
LINC00642-201ENST00000419459 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
LINC00642-201ENST00000419459 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
LINC00642-201ENST00000419459 B5MCH6 92 aa9.32□□□□□ -0.92
LINC00642-201ENST00000419459 RHOHQ15669 191 aa9.32□□□□□ -0.92
LINC00642-201ENST00000419459 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
LINC00642-201ENST00000419459 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
LINC00642-201ENST00000419459 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
LINC00642-201ENST00000419459 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
LINC00642-201ENST00000419459 FAM110AQ9BQ89 295 aa9.31□□□□□ -0.92
LINC00642-201ENST00000419459 FAM240AA0A1B0GVK7 77 aa9.31□□□□□ -0.92
LINC00642-201ENST00000419459 M0R2P5 195 aa9.31□□□□□ -0.92
LINC00642-201ENST00000419459 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
LINC00642-201ENST00000419459 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
LINC00642-201ENST00000419459 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 H3BT86 120 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 IGHV4-30-4P0DP06 118 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 EMP1P54849 157 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 XCL2Q9UBD3 114 aa9.3□□□□□ -0.92
LINC00642-201ENST00000419459 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
LINC00642-201ENST00000419459 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
LINC00642-201ENST00000419459 PRKDCP78527 4128 aaKnown RBP9.29□□□□□ -0.92
LINC00642-201ENST00000419459 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
LINC00642-201ENST00000419459 GNRH2O43555 120 aa9.29□□□□□ -0.92
LINC00642-201ENST00000419459 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
LINC00642-201ENST00000419459 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
LINC00642-201ENST00000419459 EIF4EBP3O60516 100 aaPredicted RBP9.28□□□□□ -0.92
LINC00642-201ENST00000419459 Q1RN00 199 aa9.28□□□□□ -0.92
LINC00642-201ENST00000419459 ODF3Q96PU9 254 aa9.28□□□□□ -0.92
LINC00642-201ENST00000419459 TRAV12-3A0A0B4J271 114 aa9.27□□□□□ -0.92
LINC00642-201ENST00000419459 KLLNB2CW77 178 aa9.27□□□□□ -0.92
LINC00642-201ENST00000419459 PRM2P04554 102 aa9.27□□□□□ -0.92
LINC00642-201ENST00000419459 GIG44P09565 113 aaPredicted RBP9.27□□□□□ -0.92
LINC00642-201ENST00000419459 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.92
LINC00642-201ENST00000419459 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.92
LINC00642-201ENST00000419459 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.92
LINC00642-201ENST00000419459 FAM159AQ6UWV7 190 aa9.27□□□□□ -0.92
LINC00642-201ENST00000419459 COX6CP09669 75 aa9.27□□□□□ -0.93
LINC00642-201ENST00000419459 CMC4P56277 68 aaPredicted RBP9.27□□□□□ -0.93
LINC00642-201ENST00000419459 C15orf53Q8NAA6 179 aa9.27□□□□□ -0.93
LINC00642-201ENST00000419459 A8MTW9 85 aa9.26□□□□□ -0.93
LINC00642-201ENST00000419459 SPRY2O43597 315 aa9.26□□□□□ -0.93
LINC00642-201ENST00000419459 ZNF22P17026 224 aaPredicted RBP9.26□□□□□ -0.93
LINC00642-201ENST00000419459 DEFB121Q5J5C9 76 aa9.26□□□□□ -0.93
LINC00642-201ENST00000419459 IGHV3OR16-12A0A075B7B8 117 aa9.26□□□□□ -0.93
LINC00642-201ENST00000419459 HTN1P15515 57 aa9.26□□□□□ -0.93
LINC00642-201ENST00000419459 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
LINC00642-201ENST00000419459 A0A0J9YXY3 114 aa9.25□□□□□ -0.93
LINC00642-201ENST00000419459 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
LINC00642-201ENST00000419459 F5H697 171 aa9.25□□□□□ -0.93
LINC00642-201ENST00000419459 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
LINC00642-201ENST00000419459 KPRPQ5T749 579 aaPredicted RBP9.25□□□□□ -0.93
LINC00642-201ENST00000419459 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
LINC00642-201ENST00000419459 SPANXCQ9NY87 97 aa9.25□□□□□ -0.93
LINC00642-201ENST00000419459 K7EIL1 84 aa9.24□□□□□ -0.93
LINC00642-201ENST00000419459 TRIAP1O43715 76 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms