RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FOXA3P55318 350 aaPredicted RBP4.56□□□□□ -1.68
HMGN1-205ENST00000419378 KRTAP10-1P60331 282 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 RPL23P62829 140 aaKnown RBP4.56□□□□□ -1.68
HMGN1-205ENST00000419378 IQCJQ1A5X6 159 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 LBHQ53QV2 105 aaPredicted RBP4.56□□□□□ -1.68
HMGN1-205ENST00000419378 ATRAIDQ6UW56 229 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 Q8N976 141 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 GATD1Q8NB37 220 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 TSKUQ8WUA8 353 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 ISOC2Q96AB3 205 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 NIT2Q9NQR4 276 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 A0A1B0GUT8 65 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 FAM231BA6NCW3 169 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 PRSS1P07477 247 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 RBX1P62877 108 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 Q0VG73 95 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 PEA15Q15121 130 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 TMEM241Q24JQ0 296 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 ENHOQ6UWT2 76 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 DEFB104AQ8WTQ1 72 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 BAALCQ8WXS3 180 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 FRZBQ92765 325 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 BORCS7Q96B45 105 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 RPL39LQ96EH5 51 aaKnown RBP4.55□□□□□ -1.68
HMGN1-205ENST00000419378 TMEM243Q9BU79 118 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 SMDT1Q9H4I9 107 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 NAT8Q9UHE5 227 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 V9GYV3 84 aa4.55□□□□□ -1.68
HMGN1-205ENST00000419378 SMIM1B2RUZ4 78 aa4.54□□□□□ -1.68
HMGN1-205ENST00000419378 COTL1Q14019 142 aa4.54□□□□□ -1.68
HMGN1-205ENST00000419378 ADIRFQ15847 76 aa4.54□□□□□ -1.68
HMGN1-205ENST00000419378 MIAQ16674 131 aa4.54□□□□□ -1.68
HMGN1-205ENST00000419378 CLPSL2Q6UWE3 100 aa4.54□□□□□ -1.68
HMGN1-205ENST00000419378 PRR34Q9NV39 138 aa4.54□□□□□ -1.68
HMGN1-205ENST00000419378 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.53□□□□□ -1.68
HMGN1-205ENST00000419378 UBE2L6O14933 153 aa4.53□□□□□ -1.68
HMGN1-205ENST00000419378 XGP55808 180 aa4.53□□□□□ -1.68
HMGN1-205ENST00000419378 LINC00269Q8N2A0 174 aa4.53□□□□□ -1.68
HMGN1-205ENST00000419378 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
HMGN1-205ENST00000419378 NUP35Q8NFH5 326 aa4.53□□□□□ -1.68
HMGN1-205ENST00000419378 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
HMGN1-205ENST00000419378 NAT8BQ9UHF3 227 aa4.53□□□□□ -1.68
HMGN1-205ENST00000419378 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 TRBV6-5A0A0K0K1A5 114 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 SMIM27A0A1W2PRY6 76 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 GAS8-AS1O95177 125 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 NCR2O95944 276 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 HLA-DQA1P01909 254 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 RAB4AP20338 218 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 REG3AQ06141 175 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 AMN1Q8IY45 258 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 MRAP2Q96G30 205 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 RNF185Q96GF1 192 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 TMEM70Q9BUB7 260 aa4.52□□□□□ -1.69
HMGN1-205ENST00000419378 VPS13BQ7Z7G8 4022 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-205ENST00000419378 IGKV2-29A2NJV5 120 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-205ENST00000419378 C5orf52A6NGY3 159 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 APCSP02743 223 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 RPS10P46783 165 aaKnown RBP4.51□□□□□ -1.69
HMGN1-205ENST00000419378 RAB14P61106 215 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 HAMPP81172 84 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 RIGQ13278 110 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 KIAA1644Q3SXP7 199 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
HMGN1-205ENST00000419378 IGLV10-54A0A075B6I4 117 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 TRBV27A0A0K0K1C4 114 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 SMKR1H3BMG3 65 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 I3L3M4 83 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 PMCHP20382 165 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 LINC01620Q4KN68 170 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 C14orf177Q52M58 125 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 TMEM242Q9NWH2 141 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
HMGN1-205ENST00000419378 TRAV8-4A0A0B4J246 113 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 A0A1B0GW15 77 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 H7C423 109 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 FGF6P10767 208 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 POLR2KP53803 58 aaKnown RBP4.49□□□□□ -1.69
HMGN1-205ENST00000419378 CLLU1Q5K131 121 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 FAM104BQ5XKR9 115 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 AMMECR1LQ6DCA0 310 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 RNASEKQ6P5S7 137 aaKnown RBP4.49□□□□□ -1.69
HMGN1-205ENST00000419378 Q6ZSA8 131 aa4.49□□□□□ -1.69
HMGN1-205ENST00000419378 IGKV3OR2-268A0A0C4DH90 116 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 A0A1B0GXF2 115 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 A4D1N5 150 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 EPM2AB3EWF7 344 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 PPP1R2P9O14990 202 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 PPP1R17O96001 155 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 S100A8P05109 93 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 ESDP10768 282 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 ZNF25P17030 456 aaPredicted RBP4.48□□□□□ -1.69
HMGN1-205ENST00000419378 HBBP68871 147 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 IFITM2Q01629 132 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms