RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 LINC00308Q8TCZ7 52 aa12.74□□□□□ -0.37
PMS1-206ENST00000418224 FAM218AQ96MZ4 157 aa12.74□□□□□ -0.37
PMS1-206ENST00000418224 CDKN2A-AS1Q9UH64 79 aa12.74□□□□□ -0.37
PMS1-206ENST00000418224 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.73□□□□□ -0.37
PMS1-206ENST00000418224 IGKV2-29A2NJV5 120 aaPredicted RBP12.73□□□□□ -0.37
PMS1-206ENST00000418224 OXTP01178 125 aa12.73□□□□□ -0.37
PMS1-206ENST00000418224 SPTBN4Q9H254 2564 aa12.73□□□□□ -0.37
PMS1-206ENST00000418224 UCNP55089 124 aa12.73□□□□□ -0.37
PMS1-206ENST00000418224 A6NDX4 124 aa12.72□□□□□ -0.37
PMS1-206ENST00000418224 Q9UF83 564 aa12.72□□□□□ -0.37
PMS1-206ENST00000418224 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
PMS1-206ENST00000418224 Q9H8V8 135 aa12.72□□□□□ -0.37
PMS1-206ENST00000418224 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
PMS1-206ENST00000418224 TINCRA0A1B0GVN0 87 aa12.71□□□□□ -0.37
PMS1-206ENST00000418224 RPL18AQ02543 176 aaKnown RBP12.71□□□□□ -0.37
PMS1-206ENST00000418224 KNCNA6PVL3 124 aa12.71□□□□□ -0.38
PMS1-206ENST00000418224 PIMREGQ9BSJ6 248 aa12.71□□□□□ -0.38
PMS1-206ENST00000418224 IGHV1OR15-1A0A075B7D0 117 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 IGLV1-40P01703 118 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 SNRPD3P62318 126 aaKnown RBP12.7□□□□□ -0.38
PMS1-206ENST00000418224 C10orf99Q6UWK7 81 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 PYGO1Q9Y3Y4 419 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 F5H768 121 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 WIPF1O43516 503 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 INAFM2P0DMQ5 153 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 SOSTDC1Q6X4U4 206 aa12.7□□□□□ -0.38
PMS1-206ENST00000418224 DNAL4O96015 105 aa12.69□□□□□ -0.38
PMS1-206ENST00000418224 HIST1H4AP62805 103 aaKnown RBP12.69□□□□□ -0.38
PMS1-206ENST00000418224 BEAN1Q3B7T3 259 aa12.69□□□□□ -0.38
PMS1-206ENST00000418224 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
PMS1-206ENST00000418224 TMEM258P61165 79 aa12.68□□□□□ -0.38
PMS1-206ENST00000418224 CRYBG3Q68DQ2 2970 aa12.68□□□□□ -0.38
PMS1-206ENST00000418224 C14orf132Q9NPU4 83 aa12.68□□□□□ -0.38
PMS1-206ENST00000418224 K7EMT4 169 aa12.68□□□□□ -0.38
PMS1-206ENST00000418224 TIMM17BO60830 172 aa12.68□□□□□ -0.38
PMS1-206ENST00000418224 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.67□□□□□ -0.38
PMS1-206ENST00000418224 NDUFA1O15239 70 aa12.67□□□□□ -0.38
PMS1-206ENST00000418224 MALP21145 153 aa12.67□□□□□ -0.38
PMS1-206ENST00000418224 SERP2Q8N6R1 65 aa12.67□□□□□ -0.38
PMS1-206ENST00000418224 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
PMS1-206ENST00000418224 PRIMA1Q86XR5 153 aa12.67□□□□□ -0.38
PMS1-206ENST00000418224 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
PMS1-206ENST00000418224 COX6A2Q02221 97 aa12.65□□□□□ -0.38
PMS1-206ENST00000418224 C10orf105Q8TEF2 133 aa12.65□□□□□ -0.38
PMS1-206ENST00000418224 UBE2D4Q9Y2X8 147 aa12.65□□□□□ -0.38
PMS1-206ENST00000418224 PIK3CD-AS1Q5SR53 167 aa12.64□□□□□ -0.39
PMS1-206ENST00000418224 LINC00467Q9BRT7 94 aa12.64□□□□□ -0.39
PMS1-206ENST00000418224 IGHV4-30-2A0A087WSY4 118 aa12.64□□□□□ -0.39
PMS1-206ENST00000418224 PRM2P04554 102 aa12.64□□□□□ -0.39
PMS1-206ENST00000418224 CCL19Q99731 98 aa12.64□□□□□ -0.39
PMS1-206ENST00000418224 DGAT2L7PQ6IED9 249 aa12.64□□□□□ -0.39
PMS1-206ENST00000418224 LINC00846Q9NV44 126 aa12.64□□□□□ -0.39
PMS1-206ENST00000418224 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
PMS1-206ENST00000418224 K7EQG2 157 aa12.63□□□□□ -0.39
PMS1-206ENST00000418224 AVPP01185 164 aa12.63□□□□□ -0.39
PMS1-206ENST00000418224 CFHR3Q02985 330 aa12.63□□□□□ -0.39
PMS1-206ENST00000418224 UPK3BQ9BT76 320 aa12.63□□□□□ -0.39
PMS1-206ENST00000418224 CELSR2Q9HCU4 2923 aa12.63□□□□□ -0.39
PMS1-206ENST00000418224 MSMBP08118 114 aa12.62□□□□□ -0.39
PMS1-206ENST00000418224 GNLYP22749 145 aa12.62□□□□□ -0.39
PMS1-206ENST00000418224 CHCHD7Q9BUK0 85 aa12.62□□□□□ -0.39
PMS1-206ENST00000418224 IGHV4-59P01825 116 aa12.62□□□□□ -0.39
PMS1-206ENST00000418224 Q5XG85 94 aa12.62□□□□□ -0.39
PMS1-206ENST00000418224 PSMB8P28062 276 aa12.61□□□□□ -0.39
PMS1-206ENST00000418224 LINC01561Q8N1V8 128 aa12.61□□□□□ -0.39
PMS1-206ENST00000418224 FAM222AQ5U5X8 452 aa12.61□□□□□ -0.39
PMS1-206ENST00000418224 Q6ZSN1 163 aa12.6□□□□□ -0.39
PMS1-206ENST00000418224 USP9YO00507 2555 aaPredicted RBP12.58□□□□□ -0.39
PMS1-206ENST00000418224 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
PMS1-206ENST00000418224 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
PMS1-206ENST00000418224 RBMY1FQ15415 496 aaKnown RBP12.58□□□□□ -0.4
PMS1-206ENST00000418224 A0A087WYN8 130 aa12.58□□□□□ -0.4
PMS1-206ENST00000418224 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
PMS1-206ENST00000418224 HIST2H2BDQ6DRA6 164 aa12.58□□□□□ -0.4
PMS1-206ENST00000418224 FHL2Q14192 279 aa12.57□□□□□ -0.4
PMS1-206ENST00000418224 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
PMS1-206ENST00000418224 WFDC9Q8NEX5 89 aa12.57□□□□□ -0.4
PMS1-206ENST00000418224 C2CD3Q4AC94 2353 aa12.56□□□□□ -0.4
PMS1-206ENST00000418224 NCR3O14931 201 aa12.56□□□□□ -0.4
PMS1-206ENST00000418224 HILS1P60008 231 aa12.56□□□□□ -0.4
PMS1-206ENST00000418224 Q6JHZ5 121 aa12.56□□□□□ -0.4
PMS1-206ENST00000418224 COPS9Q8WXC6 57 aa12.55□□□□□ -0.4
PMS1-206ENST00000418224 DEFB131AP59861 70 aa12.55□□□□□ -0.4
PMS1-206ENST00000418224 IGHV3OR16-12A0A075B7B8 117 aa12.54□□□□□ -0.4
PMS1-206ENST00000418224 CRPP02741 224 aa12.54□□□□□ -0.4
PMS1-206ENST00000418224 SLPIP03973 132 aa12.54□□□□□ -0.4
PMS1-206ENST00000418224 ITPR1Q14643 2758 aa12.54□□□□□ -0.4
PMS1-206ENST00000418224 LINC00242Q5T6M2 205 aa12.54□□□□□ -0.4
PMS1-206ENST00000418224 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
PMS1-206ENST00000418224 B4DSR2 109 aa12.53□□□□□ -0.4
PMS1-206ENST00000418224 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
PMS1-206ENST00000418224 IGLV5-39A0A0G2JS06 123 aa12.52□□□□□ -0.4
PMS1-206ENST00000418224 SMIM1B2RUZ4 78 aa12.52□□□□□ -0.41
PMS1-206ENST00000418224 DEFB136Q30KP8 78 aa12.52□□□□□ -0.41
PMS1-206ENST00000418224 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.41
PMS1-206ENST00000418224 IGLV5-45A0A087WSX0 123 aa12.51□□□□□ -0.41
PMS1-206ENST00000418224 LECT2O14960 151 aa12.51□□□□□ -0.41
PMS1-206ENST00000418224 GHRHP01286 108 aa12.51□□□□□ -0.41
PMS1-206ENST00000418224 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
PMS1-206ENST00000418224 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms