RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
SKA1-203ENST00000417656 MAPKAPK5-AS1Q8N8E1 139 aa8.28□□□□□ -1.08
SKA1-203ENST00000417656 LAMTOR2Q9Y2Q5 125 aa8.28□□□□□ -1.08
SKA1-203ENST00000417656 COX11Q9Y6N1 276 aa8.28□□□□□ -1.08
SKA1-203ENST00000417656 IGLV10-54A0A075B6I4 117 aa8.27□□□□□ -1.09
SKA1-203ENST00000417656 C16orf90A8MZG2 172 aa8.27□□□□□ -1.09
SKA1-203ENST00000417656 TCAPO15273 167 aa8.27□□□□□ -1.09
SKA1-203ENST00000417656 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.09
SKA1-203ENST00000417656 GNB1LQ9BYB4 327 aa8.27□□□□□ -1.09
SKA1-203ENST00000417656 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
SKA1-203ENST00000417656 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
SKA1-203ENST00000417656 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
SKA1-203ENST00000417656 MRPL52Q86TS9 123 aaKnown RBP8.26□□□□□ -1.09
SKA1-203ENST00000417656 OR5A1Q8NGJ0 315 aa8.26□□□□□ -1.09
SKA1-203ENST00000417656 BAALCQ8WXS3 180 aa8.26□□□□□ -1.09
SKA1-203ENST00000417656 TMEM101Q96IK0 257 aa8.26□□□□□ -1.09
SKA1-203ENST00000417656 MT-ND6P03923 174 aa8.25□□□□□ -1.09
SKA1-203ENST00000417656 COX19Q49B96 90 aa8.25□□□□□ -1.09
SKA1-203ENST00000417656 MRPL18Q9H0U6 180 aaKnown RBP8.25□□□□□ -1.09
SKA1-203ENST00000417656 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
SKA1-203ENST00000417656 DNAH5Q8TE73 4624 aa8.25□□□□□ -1.09
SKA1-203ENST00000417656 PRSS47A8MTI9 375 aa8.24□□□□□ -1.09
SKA1-203ENST00000417656 RPL39P62891 51 aaKnown RBP8.24□□□□□ -1.09
SKA1-203ENST00000417656 KRTAP26-1Q6PEX3 210 aa8.24□□□□□ -1.09
SKA1-203ENST00000417656 CBLN2Q8IUK8 224 aa8.24□□□□□ -1.09
SKA1-203ENST00000417656 Q8N814 137 aa8.24□□□□□ -1.09
SKA1-203ENST00000417656 TRAV8-4A0A0B4J246 113 aa8.23□□□□□ -1.09
SKA1-203ENST00000417656 RAB5AP20339 215 aa8.23□□□□□ -1.09
SKA1-203ENST00000417656 Q6ZUT4 128 aa8.23□□□□□ -1.09
SKA1-203ENST00000417656 Q8N8P6 123 aa8.23□□□□□ -1.09
SKA1-203ENST00000417656 TMEM18Q96B42 140 aa8.23□□□□□ -1.09
SKA1-203ENST00000417656 YPEL4Q96NS1 127 aa8.23□□□□□ -1.09
SKA1-203ENST00000417656 SMAGPQ0VAQ4 97 aa8.22□□□□□ -1.09
SKA1-203ENST00000417656 FABP9Q0Z7S8 132 aa8.22□□□□□ -1.09
SKA1-203ENST00000417656 RNASE13Q5GAN3 156 aaKnown RBP8.22□□□□□ -1.09
SKA1-203ENST00000417656 DGAT2L7PQ6IED9 249 aa8.22□□□□□ -1.09
SKA1-203ENST00000417656 CDPF1Q6NVV7 123 aa8.22□□□□□ -1.09
SKA1-203ENST00000417656 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
SKA1-203ENST00000417656 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.21□□□□□ -1.1
SKA1-203ENST00000417656 USP17L23D6RBM5 183 aa8.21□□□□□ -1.1
SKA1-203ENST00000417656 IFI27P40305 119 aaPredicted RBP8.21□□□□□ -1.1
SKA1-203ENST00000417656 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.1
SKA1-203ENST00000417656 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
SKA1-203ENST00000417656 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.1
SKA1-203ENST00000417656 TIMM21Q9BVV7 248 aa8.21□□□□□ -1.1
SKA1-203ENST00000417656 NXT2Q9NPJ8 142 aaKnown RBP8.21□□□□□ -1.1
SKA1-203ENST00000417656 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
SKA1-203ENST00000417656 KIAA1109Q2LD37 5005 aa8.21□□□□□ -1.1
SKA1-203ENST00000417656 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
SKA1-203ENST00000417656 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
SKA1-203ENST00000417656 GAGE12HA6NDE8 117 aa8.2□□□□□ -1.1
SKA1-203ENST00000417656 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
SKA1-203ENST00000417656 SMCO4Q9NRQ5 59 aa8.2□□□□□ -1.1
SKA1-203ENST00000417656 SPANXA1Q9NS26 97 aa8.2□□□□□ -1.1
SKA1-203ENST00000417656 TRAPPC1Q9Y5R8 145 aa8.2□□□□□ -1.1
SKA1-203ENST00000417656 LINC00959A0A1B0GUT2 108 aa8.19□□□□□ -1.1
SKA1-203ENST00000417656 ORMDL2Q53FV1 153 aa8.19□□□□□ -1.1
SKA1-203ENST00000417656 OPRPNQ99935 248 aaPredicted RBP8.19□□□□□ -1.1
SKA1-203ENST00000417656 CCL25O15444 150 aa8.18□□□□□ -1.1
SKA1-203ENST00000417656 XCL1P47992 114 aa8.18□□□□□ -1.1
SKA1-203ENST00000417656 C2orf66Q6UXQ4 117 aa8.18□□□□□ -1.1
SKA1-203ENST00000417656 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
SKA1-203ENST00000417656 K7EMI3 77 aa8.17□□□□□ -1.1
SKA1-203ENST00000417656 KRTAP10-1P60331 282 aa8.17□□□□□ -1.1
SKA1-203ENST00000417656 FOXI1Q12951 378 aa8.17□□□□□ -1.1
SKA1-203ENST00000417656 SS18Q15532 418 aa8.17□□□□□ -1.1
SKA1-203ENST00000417656 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
SKA1-203ENST00000417656 PRSS3P2Q8NHM4 247 aa8.17□□□□□ -1.1
SKA1-203ENST00000417656 CYSLTR1Q9Y271 337 aa8.17□□□□□ -1.1
SKA1-203ENST00000417656 HERC2O95714 4834 aa8.16□□□□□ -1.1
SKA1-203ENST00000417656 RYR1P21817 5038 aa8.16□□□□□ -1.1
SKA1-203ENST00000417656 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
SKA1-203ENST00000417656 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
SKA1-203ENST00000417656 PRSS1P07477 247 aa8.16□□□□□ -1.1
SKA1-203ENST00000417656 GCSHP23434 173 aa8.16□□□□□ -1.1
SKA1-203ENST00000417656 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
SKA1-203ENST00000417656 KRTAP4-12Q9BQ66 201 aa8.16□□□□□ -1.1
SKA1-203ENST00000417656 APOBP04114 4563 aaKnown RBP8.15□□□□□ -1.1
SKA1-203ENST00000417656 IFITM10A6NMD0 228 aa8.15□□□□□ -1.1
SKA1-203ENST00000417656 FA2HQ7L5A8 372 aa8.15□□□□□ -1.1
SKA1-203ENST00000417656 C15orf56Q8N910 161 aa8.15□□□□□ -1.1
SKA1-203ENST00000417656 C18orf32Q8TCD1 76 aa8.15□□□□□ -1.1
SKA1-203ENST00000417656 PYGO1Q9Y3Y4 419 aa8.15□□□□□ -1.1
SKA1-203ENST00000417656 LINC01620Q4KN68 170 aa8.14□□□□□ -1.11
SKA1-203ENST00000417656 CD164L2Q6UWJ8 174 aa8.14□□□□□ -1.11
SKA1-203ENST00000417656 hDV102S1A0JD36 115 aa8.13□□□□□ -1.11
SKA1-203ENST00000417656 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
SKA1-203ENST00000417656 C1orf196B1AJZ1 125 aa8.13□□□□□ -1.11
SKA1-203ENST00000417656 SCO1O75880 301 aa8.13□□□□□ -1.11
SKA1-203ENST00000417656 HIGD2BQ4VC39 106 aa8.13□□□□□ -1.11
SKA1-203ENST00000417656 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
SKA1-203ENST00000417656 TMEM141Q96I45 108 aa8.13□□□□□ -1.11
SKA1-203ENST00000417656 IGIPA6NJ69 53 aa8.12□□□□□ -1.11
SKA1-203ENST00000417656 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
SKA1-203ENST00000417656 LINC00173Q6ZV60 143 aa8.12□□□□□ -1.11
SKA1-203ENST00000417656 URB1-AS1Q96HZ7 61 aa8.12□□□□□ -1.11
SKA1-203ENST00000417656 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
SKA1-203ENST00000417656 G0S2P27469 103 aa8.11□□□□□ -1.11
SKA1-203ENST00000417656 LCE3BQ5TA77 95 aa8.11□□□□□ -1.11
SKA1-203ENST00000417656 CFAP161Q6P656 301 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms