RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 CDC42SE2Q9NRR3 84 aa12.8□□□□□ -0.36
SLC39A1-206ENST00000417348 NPSP0C0P6 89 aa12.79□□□□□ -0.36
SLC39A1-206ENST00000417348 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
SLC39A1-206ENST00000417348 MAPKAPK5-AS1Q8N8E1 139 aa12.79□□□□□ -0.36
SLC39A1-206ENST00000417348 SPANXA1Q9NS26 97 aa12.79□□□□□ -0.36
SLC39A1-206ENST00000417348 UBE2D4Q9Y2X8 147 aa12.79□□□□□ -0.36
SLC39A1-206ENST00000417348 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
SLC39A1-206ENST00000417348 PYGO1Q9Y3Y4 419 aa12.78□□□□□ -0.36
SLC39A1-206ENST00000417348 ORMDL2Q53FV1 153 aa12.77□□□□□ -0.37
SLC39A1-206ENST00000417348 DGAT2L7PQ6IED9 249 aa12.77□□□□□ -0.37
SLC39A1-206ENST00000417348 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.37
SLC39A1-206ENST00000417348 C16orf90A8MZG2 172 aa12.76□□□□□ -0.37
SLC39A1-206ENST00000417348 KRTAP10-2P60368 255 aa12.76□□□□□ -0.37
SLC39A1-206ENST00000417348 MRPS36P82909 103 aaKnown RBP12.76□□□□□ -0.37
SLC39A1-206ENST00000417348 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
SLC39A1-206ENST00000417348 YPEL4Q96NS1 127 aa12.75□□□□□ -0.37
SLC39A1-206ENST00000417348 ALKBH7Q9BT30 221 aaPredicted RBP12.75□□□□□ -0.37
SLC39A1-206ENST00000417348 SMCO4Q9NRQ5 59 aa12.75□□□□□ -0.37
SLC39A1-206ENST00000417348 LINC01546A6NGU7 62 aa12.74□□□□□ -0.37
SLC39A1-206ENST00000417348 MRPL18Q9H0U6 180 aaKnown RBP12.74□□□□□ -0.37
SLC39A1-206ENST00000417348 SLC7A5P1Q8MH63 180 aa12.73□□□□□ -0.37
SLC39A1-206ENST00000417348 CLPSL2Q6UWE3 100 aa12.72□□□□□ -0.37
SLC39A1-206ENST00000417348 BAALCQ8WXS3 180 aa12.72□□□□□ -0.37
SLC39A1-206ENST00000417348 DYNC1H1Q14204 4646 aaKnown RBP12.72□□□□□ -0.37
SLC39A1-206ENST00000417348 TGIF2-C20orf24A0A0A6YYL0 155 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 LINC00959A0A1B0GUT2 108 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 CDK2AP2O75956 126 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 IFI27P40305 119 aaPredicted RBP12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 FABP9Q0Z7S8 132 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 SS18Q15532 418 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 CFAP161Q6P656 301 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 CYSLTR1Q9Y271 337 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 TRAPPC1Q9Y5R8 145 aa12.71□□□□□ -0.37
SLC39A1-206ENST00000417348 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
SLC39A1-206ENST00000417348 DNAH5Q8TE73 4624 aa12.69□□□□□ -0.38
SLC39A1-206ENST00000417348 IGLV5-52A0A0A0MRZ9 124 aa12.69□□□□□ -0.38
SLC39A1-206ENST00000417348 LOC389332A0A1B0GUA5 103 aa12.69□□□□□ -0.38
SLC39A1-206ENST00000417348 WFDC2Q14508 124 aa12.69□□□□□ -0.38
SLC39A1-206ENST00000417348 KIAA1644Q3SXP7 199 aa12.69□□□□□ -0.38
SLC39A1-206ENST00000417348 CD164L2Q6UWJ8 174 aa12.69□□□□□ -0.38
SLC39A1-206ENST00000417348 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
SLC39A1-206ENST00000417348 USP17L23D6RBM5 183 aa12.68□□□□□ -0.38
SLC39A1-206ENST00000417348 RPL39P62891 51 aaKnown RBP12.68□□□□□ -0.38
SLC39A1-206ENST00000417348 PAPPA-AS1Q5QFB9 102 aa12.68□□□□□ -0.38
SLC39A1-206ENST00000417348 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
SLC39A1-206ENST00000417348 GCSHP23434 173 aa12.67□□□□□ -0.38
SLC39A1-206ENST00000417348 C2orf66Q6UXQ4 117 aa12.67□□□□□ -0.38
SLC39A1-206ENST00000417348 LRP1BQ9NZR2 4599 aa12.67□□□□□ -0.38
SLC39A1-206ENST00000417348 FAM104AQ969W3 186 aa12.66□□□□□ -0.38
SLC39A1-206ENST00000417348 TIMM17AQ99595 171 aa12.66□□□□□ -0.38
SLC39A1-206ENST00000417348 GAGE12HA6NDE8 117 aa12.65□□□□□ -0.38
SLC39A1-206ENST00000417348 FOXI1Q12951 378 aa12.65□□□□□ -0.38
SLC39A1-206ENST00000417348 Q6ZUT4 128 aa12.65□□□□□ -0.38
SLC39A1-206ENST00000417348 TMEM141Q96I45 108 aa12.65□□□□□ -0.38
SLC39A1-206ENST00000417348 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
SLC39A1-206ENST00000417348 TOMM6Q96B49 74 aa12.64□□□□□ -0.39
SLC39A1-206ENST00000417348 IGIPA6NJ69 53 aa12.63□□□□□ -0.39
SLC39A1-206ENST00000417348 LECT2O14960 151 aa12.63□□□□□ -0.39
SLC39A1-206ENST00000417348 RAB5BP61020 215 aa12.63□□□□□ -0.39
SLC39A1-206ENST00000417348 Q6ZN92 141 aa12.63□□□□□ -0.39
SLC39A1-206ENST00000417348 IGLV4-3A0A075B6K6 122 aa12.62□□□□□ -0.39
SLC39A1-206ENST00000417348 IGKV3OR2-268A0A0C4DH90 116 aa12.62□□□□□ -0.39
SLC39A1-206ENST00000417348 CBLN2Q8IUK8 224 aa12.62□□□□□ -0.39
SLC39A1-206ENST00000417348 C18orf32Q8TCD1 76 aa12.62□□□□□ -0.39
SLC39A1-206ENST00000417348 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
SLC39A1-206ENST00000417348 GVQW2A0A096LPI5 108 aaPredicted RBP12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 PRSS1P07477 247 aa12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 TEX43Q6ZNM6 134 aa12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 FA2HQ7L5A8 372 aa12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 ERASQ7Z444 233 aa12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 FAM19A3Q7Z5A8 133 aa12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 AMELXQ99217 191 aa12.61□□□□□ -0.39
SLC39A1-206ENST00000417348 XCL1P47992 114 aa12.6□□□□□ -0.39
SLC39A1-206ENST00000417348 C15orf56Q8N910 161 aa12.6□□□□□ -0.39
SLC39A1-206ENST00000417348 C2orf88Q9BSF0 95 aa12.6□□□□□ -0.39
SLC39A1-206ENST00000417348 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.59□□□□□ -0.39
SLC39A1-206ENST00000417348 LINC00614P0C842 121 aa12.59□□□□□ -0.39
SLC39A1-206ENST00000417348 C9orf163Q8N9P6 203 aa12.59□□□□□ -0.39
SLC39A1-206ENST00000417348 KIAA1109Q2LD37 5005 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 TRAV13-1A0A0B4J241 112 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 IFITM10A6NMD0 228 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 COX7A2LO14548 114 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 SEC11AP67812 179 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 Q6ZSA8 131 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 LINC01561Q8N1V8 128 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 VCX2Q9H322 139 aa12.58□□□□□ -0.4
SLC39A1-206ENST00000417348 IGHV3OR16-9A0A0B4J2B5 98 aa12.57□□□□□ -0.4
SLC39A1-206ENST00000417348 hDV102S1A0JD36 115 aa12.57□□□□□ -0.4
SLC39A1-206ENST00000417348 APOMO95445 188 aa12.57□□□□□ -0.4
SLC39A1-206ENST00000417348 KRTAP10-1P60331 282 aa12.57□□□□□ -0.4
SLC39A1-206ENST00000417348 F8WDY8 70 aa12.56□□□□□ -0.4
SLC39A1-206ENST00000417348 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
SLC39A1-206ENST00000417348 RYR1P21817 5038 aa12.55□□□□□ -0.4
SLC39A1-206ENST00000417348 COLCA2A8K830 154 aa12.55□□□□□ -0.4
SLC39A1-206ENST00000417348 UBE2D1P51668 147 aa12.55□□□□□ -0.4
SLC39A1-206ENST00000417348 RNASE13Q5GAN3 156 aaKnown RBP12.55□□□□□ -0.4
SLC39A1-206ENST00000417348 CHCHD1Q96BP2 118 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms