RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 POLR2KP53803 58 aaKnown RBP4.61□□□□□ -1.67
LINC00343-201ENST00000414368 ELOBQ15370 118 aa4.61□□□□□ -1.67
LINC00343-201ENST00000414368 TMEM136Q6ZRR5 245 aa4.61□□□□□ -1.67
LINC00343-201ENST00000414368 FRZBQ92765 325 aa4.61□□□□□ -1.67
LINC00343-201ENST00000414368 CHCHD5Q9BSY4 110 aa4.61□□□□□ -1.67
LINC00343-201ENST00000414368 TMEM70Q9BUB7 260 aa4.61□□□□□ -1.67
LINC00343-201ENST00000414368 ST20Q9HBF5 79 aa4.61□□□□□ -1.67
LINC00343-201ENST00000414368 TRAV9-1A0A075B6T8 112 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 I3L3M4 83 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 VPREB1P12018 145 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 PMCHP20382 165 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 GAGE6Q13070 117 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 COTL1Q14019 142 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 KIAA1644Q3SXP7 199 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 LINC01556Q5JQF7 62 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 NIT1Q86X76 327 aa4.6□□□□□ -1.67
LINC00343-201ENST00000414368 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.6□□□□□ -1.67
LINC00343-201ENST00000414368 PKD1P98161 4303 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 TRBV24-1A0A075B6N3 115 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 TRBV25-1A0A075B6N4 114 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 IGKV2D-30A0A075B6S6 120 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 TRAV9-2A0A087WT02 112 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 IGHV1-24A0A0C4DH33 117 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 LOC389332A0A1B0GUA5 103 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 RTL8CO15255 209 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 TSHBP01222 138 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 IQCJQ1A5X6 159 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 MPV17L2Q567V2 206 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 TTC32Q5I0X7 151 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 C1orf134Q5TEV5 83 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 CBLN2Q8IUK8 224 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 ORMDL3Q8N138 153 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 Q8N976 141 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 PRELID3AQ96N28 172 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 YPEL4Q96NS1 127 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 TMEM243Q9BU79 118 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 GNB1LQ9BYB4 327 aa4.59□□□□□ -1.67
LINC00343-201ENST00000414368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.58□□□□□ -1.68
LINC00343-201ENST00000414368 A0A087WX48 190 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 TRBV27A0A0K0K1C4 114 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 IGKV2-29A2NJV5 120 aaPredicted RBP4.58□□□□□ -1.68
LINC00343-201ENST00000414368 IBA57-AS1B1ANH7 110 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 PPP1R17O96001 155 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 APCSP02743 223 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 PPBPP02775 128 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 UBE2V1Q13404 147 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 TMEM97Q5BJF2 176 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 C6orf223Q8N319 242 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 C20orf78Q9BR46 151 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 CHCHD7Q9BUK0 85 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 Q9HAA7 133 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 KLK12Q9UKR0 248 aa4.58□□□□□ -1.68
LINC00343-201ENST00000414368 IGLV4-60A0A075B6I1 120 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 PHOX2AO14813 284 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 UBE2L6O14933 153 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 TCAPO15273 167 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 SCO1O75880 301 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 HLA-DQA1P01909 254 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 ESDP10768 282 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 FCER1GP30273 86 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 SNRPEP62304 92 aaKnown RBP4.57□□□□□ -1.68
LINC00343-201ENST00000414368 RBX1P62877 108 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 FABP9Q0Z7S8 132 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 C10orf126Q8N4M7 172 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 SMIM2Q9BVW6 85 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 SMCO4Q9NRQ5 59 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 DNAH11Q96DT5 4516 aa4.57□□□□□ -1.68
LINC00343-201ENST00000414368 K7EP13 123 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 ANGP03950 147 aaKnown RBP4.56□□□□□ -1.68
LINC00343-201ENST00000414368 RPL32P62910 135 aaKnown RBP4.56□□□□□ -1.68
LINC00343-201ENST00000414368 COX19Q49B96 90 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 RNASEKQ6P5S7 137 aaKnown RBP4.56□□□□□ -1.68
LINC00343-201ENST00000414368 CLPSL2Q6UWE3 100 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
LINC00343-201ENST00000414368 LINC00269Q8N2A0 174 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 UBE2WQ96B02 151 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 KIR2DL4Q99706 377 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 ALKBH7Q9BT30 221 aaPredicted RBP4.56□□□□□ -1.68
LINC00343-201ENST00000414368 MAP1LC3AQ9H492 121 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
LINC00343-201ENST00000414368 A0A1B0GUV1 79 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 MT-ND6P03923 174 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 FGF6P10767 208 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 IFI27P40305 119 aaPredicted RBP4.55□□□□□ -1.68
LINC00343-201ENST00000414368 RPL39P62891 51 aaKnown RBP4.55□□□□□ -1.68
LINC00343-201ENST00000414368 AMMECR1LQ6DCA0 310 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 ENHOQ6UWT2 76 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 Q8N8P6 123 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 C20orf203Q8NBC4 194 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 LAMTOR2Q9Y2Q5 125 aa4.55□□□□□ -1.68
LINC00343-201ENST00000414368 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
LINC00343-201ENST00000414368 IGKV2D-24A0A075B6R9 120 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 TRAV8-3A0A0A6YYJ7 113 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 COLCA2A8K830 154 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 RAB5AP20339 215 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 PKIAP61925 76 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 LAGE3Q14657 143 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms