RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 SFRP2Q96HF1 295 aa3.39□□□□□ -1.87
NOD1-203ENST00000413433 PRRT1Q99946 306 aa3.39□□□□□ -1.87
NOD1-203ENST00000413433 TMEM147Q9BVK8 224 aa3.39□□□□□ -1.87
NOD1-203ENST00000413433 TIMM8BQ9Y5J9 83 aaPredicted RBP3.39□□□□□ -1.87
NOD1-203ENST00000413433 HERC1Q15751 4861 aa3.39□□□□□ -1.87
NOD1-203ENST00000413433 APOBP04114 4563 aaKnown RBP3.39□□□□□ -1.87
NOD1-203ENST00000413433 DNAH5Q8TE73 4624 aa3.39□□□□□ -1.87
NOD1-203ENST00000413433 A0A096LPF7 62 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 SLC25A20O43772 301 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 PITX3O75364 302 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 IL5P05113 134 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 METTL15P1P0C7V9 234 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 INAFM2P0DMQ5 153 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 RRAS2P62070 204 aaPredicted RBP3.38□□□□□ -1.87
NOD1-203ENST00000413433 HAMPP81172 84 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 SSBP1Q04837 148 aaKnown RBP3.38□□□□□ -1.87
NOD1-203ENST00000413433 C10orf91Q5T1B1 145 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 EIF5AL1Q6IS14 154 aaKnown RBP3.38□□□□□ -1.87
NOD1-203ENST00000413433 PATE2Q6UY27 113 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 Q6ZQT7 251 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 CYP2G1PQ6ZSU1 146 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 ADM2Q7Z4H4 148 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 NKX6-2Q9C056 277 aaPredicted RBP3.38□□□□□ -1.87
NOD1-203ENST00000413433 HIGD1AQ9Y241 93 aa3.38□□□□□ -1.87
NOD1-203ENST00000413433 TRAV12-3A0A0B4J271 114 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 A8MUU9 505 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 C1orf196B1AJZ1 125 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 INMT-MINDY4F8WBC2 141 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 H3BRN7 92 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 SYNGR2O43760 224 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 HYPMO75409 117 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 LINC00315P59091 139 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 PKIAP61925 76 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 RBX1P62877 108 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 MRPS10P82664 201 aaKnown RBP3.37□□□□□ -1.87
NOD1-203ENST00000413433 SAMD13Q5VXD3 122 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 Q6ZTI0 123 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 SCXQ7RTU7 201 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 SVBPQ8N300 66 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 CACFD1Q9UGQ2 172 aa3.37□□□□□ -1.87
NOD1-203ENST00000413433 TRAV5A0A0B4J249 113 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 H3BQ15 152 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 H3BQ85 93 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 H7BYZ3 331 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 SLC17A3O00476 420 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 SSSCA1O60232 199 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 CFDP00746 253 aaPredicted RBP3.36□□□□□ -1.87
NOD1-203ENST00000413433 IGHV3-53P01767 116 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 RPL7P18124 248 aaKnown RBP3.36□□□□□ -1.87
NOD1-203ENST00000413433 KRTAP10-1P60331 282 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 SLC38A11Q08AI6 406 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 PYDC2Q56P42 97 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 TMEM128Q5BJH2 165 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 LINC00305Q7Z4B0 112 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 LYPD1Q8N2G4 141 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 ANKRD29Q8N6D5 301 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 TMEM263Q8WUH6 116 aaKnown RBP3.36□□□□□ -1.87
NOD1-203ENST00000413433 CIB3Q96Q77 187 aaPredicted RBP3.36□□□□□ -1.87
NOD1-203ENST00000413433 PSENENQ9NZ42 101 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 HSPB11Q9Y547 144 aa3.36□□□□□ -1.87
NOD1-203ENST00000413433 IGKV2-28A0A075B6P5 120 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 TRGV2A0A075B6R0 118 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 TMEM218A2RU14 115 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 COX7A2LO14548 114 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 UBE2L6O14933 153 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 PDE6DO43924 150 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 SFT2D2O95562 160 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 IGKV2D-28P01615 120 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 PFN1P07737 140 aaKnown RBP3.35□□□□□ -1.87
NOD1-203ENST00000413433 Q5VSD8 79 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 Q6ZRN7 208 aaPredicted RBP3.35□□□□□ -1.87
NOD1-203ENST00000413433 TOMM5Q8N4H5 51 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 ZNF431Q8TF32 576 aaPredicted RBP3.35□□□□□ -1.87
NOD1-203ENST00000413433 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 SPANXA1Q9NS26 97 aa3.35□□□□□ -1.87
NOD1-203ENST00000413433 TRGV1A0A0A0MS02 117 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 DUXBA0A1W2PPF3 345 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 C9orf170A2RU37 121 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 COLCA2A8K830 154 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 LECT2O14960 151 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 ESDP10768 282 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 SLC25A6P12236 298 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 S100A7P31151 101 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 S100A11P31949 105 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 RNASE4P34096 147 aaKnown RBP3.34□□□□□ -1.87
NOD1-203ENST00000413433 MRPL51Q4U2R6 128 aaKnown RBP3.34□□□□□ -1.87
NOD1-203ENST00000413433 KRTAP11-1Q8IUC1 163 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 UPK3BQ9BT76 320 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 NPVFQ9HCQ7 196 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 MRPL16Q9NX20 251 aaKnown RBP3.34□□□□□ -1.87
NOD1-203ENST00000413433 GSKIPQ9P0R6 139 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 FUT9Q9Y231 359 aa3.34□□□□□ -1.87
NOD1-203ENST00000413433 FAT1Q14517 4588 aa3.33□□□□□ -1.88
NOD1-203ENST00000413433 A0A087WTM6 91 aa3.33□□□□□ -1.88
NOD1-203ENST00000413433 A0A1B0GV72 72 aa3.33□□□□□ -1.88
NOD1-203ENST00000413433 A0A1B0GV90 55 aa3.33□□□□□ -1.88
NOD1-203ENST00000413433 M0R3E3 92 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms