RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 MRPL52Q86TS9 123 aaKnown RBP4.6□□□□□ -1.67
VPS41-204ENST00000413141 ATOH7Q8N100 152 aa4.6□□□□□ -1.67
VPS41-204ENST00000413141 FAM104AQ969W3 186 aa4.6□□□□□ -1.67
VPS41-204ENST00000413141 OPRPNQ99935 248 aaPredicted RBP4.6□□□□□ -1.67
VPS41-204ENST00000413141 PMCHL2Q9BQD1 86 aa4.6□□□□□ -1.67
VPS41-204ENST00000413141 TIMM21Q9BVV7 248 aa4.6□□□□□ -1.67
VPS41-204ENST00000413141 A0A087WX48 190 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 ZNF25P17030 456 aaPredicted RBP4.59□□□□□ -1.67
VPS41-204ENST00000413141 MRPS36P82909 103 aaKnown RBP4.59□□□□□ -1.67
VPS41-204ENST00000413141 SMAGPQ0VAQ4 97 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 GAGE6Q13070 117 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 PMVKQ15126 192 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 PAPPA-AS1Q5QFB9 102 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 ZC2HC1BQ5TFG8 222 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 AMELXQ99217 191 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 CHCHD5Q9BSY4 110 aa4.59□□□□□ -1.67
VPS41-204ENST00000413141 MRPL35Q9NZE8 188 aaKnown RBP4.59□□□□□ -1.67
VPS41-204ENST00000413141 CSDC2Q9Y534 153 aaKnown RBP4.59□□□□□ -1.67
VPS41-204ENST00000413141 FBN3Q75N90 2809 aa4.59□□□□□ -1.68
VPS41-204ENST00000413141 IGLV4-69A0A075B6H9 119 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 PRSS29PA6NIE9 313 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 F8VRH5 84 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 PLNP26678 52 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 TIRAPP58753 221 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 RNASE13Q5GAN3 156 aaKnown RBP4.58□□□□□ -1.68
VPS41-204ENST00000413141 LELP1Q5T871 98 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 AMMECR1LQ6DCA0 310 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 DGAT2L7PQ6IED9 249 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 LYPD5Q6UWN5 251 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 C15orf53Q8NAA6 179 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 OR5A1Q8NGJ0 315 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 CST9LQ9H4G1 147 aa4.58□□□□□ -1.68
VPS41-204ENST00000413141 CHTOPQ9Y3Y2 248 aaKnown RBP4.58□□□□□ -1.68
VPS41-204ENST00000413141 EREGO14944 169 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 DPM2O94777 84 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 IGKCP01834 107 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 S100A12P80511 92 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 MAJINQ3KP22 176 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 MPV17L2Q567V2 206 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 C2orf88Q9BSF0 95 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 VAMP8Q9BV40 100 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 VCX2Q9H322 139 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 CDC42SE2Q9NRR3 84 aa4.57□□□□□ -1.68
VPS41-204ENST00000413141 IGLV4-60A0A075B6I1 120 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 TRAV9-2A0A087WT02 112 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 A0A1B0GUV1 79 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 hDV102S1A0JD36 115 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 C11orf86A6NJI1 115 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 IGLC3P0DOY3 106 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 PKIAP61925 76 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 RBX1P62877 108 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 ZNF664Q8N3J9 261 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 CHAC1Q9BUX1 264 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
VPS41-204ENST00000413141 TRAV8-6A0A0B4J262 113 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 A0A0J9YXV3 536 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 IGLL5B9A064 214 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 HSBP1L1C9JCN9 74 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 TMEM262E9PQX1 116 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 UBE2D1P51668 147 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 ESRGQ1W209 222 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 SPATA45Q537H7 98 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 NFE4Q86UQ8 179 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 WFDC10BQ8IUB3 73 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 Q8N3U1 123 aa4.55□□□□□ -1.68
VPS41-204ENST00000413141 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 TINCRA0A1B0GVN0 87 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 ANKRD39Q53RE8 183 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 STPG4Q8N801 248 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 DNAH7Q8WXX0 4024 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 CSMD3Q7Z407 3707 aa4.54□□□□□ -1.68
VPS41-204ENST00000413141 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
VPS41-204ENST00000413141 ANGP03950 147 aaKnown RBP4.53□□□□□ -1.68
VPS41-204ENST00000413141 ZNF22P17026 224 aaPredicted RBP4.53□□□□□ -1.68
VPS41-204ENST00000413141 TCTAP57738 103 aa4.53□□□□□ -1.68
VPS41-204ENST00000413141 TMEM170BQ5T4T1 132 aa4.53□□□□□ -1.68
VPS41-204ENST00000413141 LINC00242Q5T6M2 205 aa4.53□□□□□ -1.68
VPS41-204ENST00000413141 CLPSL2Q6UWE3 100 aa4.53□□□□□ -1.68
VPS41-204ENST00000413141 APLNQ9ULZ1 77 aa4.53□□□□□ -1.68
VPS41-204ENST00000413141 MRPS16Q9Y3D3 137 aaKnown RBP4.53□□□□□ -1.68
VPS41-204ENST00000413141 LINC00588Q9Y4M8 146 aa4.53□□□□□ -1.68
VPS41-204ENST00000413141 DYNC2H1Q8NCM8 4307 aaKnown RBP4.52□□□□□ -1.69
VPS41-204ENST00000413141 IGKV2D-26A0A0A0MRZ7 120 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 IGKV3OR2-268A0A0C4DH90 116 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 TMEM223A0PJW6 202 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 TSTD3H0UI37 97 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 IGHV3-33P01772 117 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 IGHV3-30-3P0DP02 117 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 CCL18P55774 89 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 HERVK_113P63121 156 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 SEC11AP67812 179 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 REG3AQ06141 175 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 LINC01556Q5JQF7 62 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 LINC00269Q8N2A0 174 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms