RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
ZNF3-204ENST00000412947 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
ZNF3-204ENST00000412947 TRAV8-4A0A0B4J246 113 aa8.46□□□□□ -1.06
ZNF3-204ENST00000412947 IGKV3OR2-268A0A0C4DH90 116 aa8.46□□□□□ -1.06
ZNF3-204ENST00000412947 ZNF664Q8N3J9 261 aa8.46□□□□□ -1.06
ZNF3-204ENST00000412947 C18orf32Q8TCD1 76 aa8.46□□□□□ -1.06
ZNF3-204ENST00000412947 CYSLTR1Q9Y271 337 aa8.46□□□□□ -1.06
ZNF3-204ENST00000412947 EREGO14944 169 aa8.45□□□□□ -1.06
ZNF3-204ENST00000412947 TRGC2P03986 189 aa8.45□□□□□ -1.06
ZNF3-204ENST00000412947 CDC42SE2Q9NRR3 84 aa8.45□□□□□ -1.06
ZNF3-204ENST00000412947 IGLV10-54A0A075B6I4 117 aa8.44□□□□□ -1.06
ZNF3-204ENST00000412947 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
ZNF3-204ENST00000412947 RAB5BP61020 215 aa8.44□□□□□ -1.06
ZNF3-204ENST00000412947 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
ZNF3-204ENST00000412947 DNAH2Q9P225 4427 aa8.44□□□□□ -1.06
ZNF3-204ENST00000412947 Q6ZUT4 128 aa8.43□□□□□ -1.06
ZNF3-204ENST00000412947 AP5S1Q9NUS5 200 aa8.43□□□□□ -1.06
ZNF3-204ENST00000412947 PYGO1Q9Y3Y4 419 aa8.43□□□□□ -1.06
ZNF3-204ENST00000412947 DNAH10Q8IVF4 4471 aa8.42□□□□□ -1.06
ZNF3-204ENST00000412947 A0A087WTM6 91 aa8.42□□□□□ -1.06
ZNF3-204ENST00000412947 MRPS36P82909 103 aaKnown RBP8.42□□□□□ -1.06
ZNF3-204ENST00000412947 SS18Q15532 418 aa8.42□□□□□ -1.06
ZNF3-204ENST00000412947 RNASE13Q5GAN3 156 aaKnown RBP8.42□□□□□ -1.06
ZNF3-204ENST00000412947 LINC00959A0A1B0GUT2 108 aa8.41□□□□□ -1.06
ZNF3-204ENST00000412947 LINC01549A6NIU2 74 aa8.41□□□□□ -1.06
ZNF3-204ENST00000412947 LINC00614P0C842 121 aa8.41□□□□□ -1.06
ZNF3-204ENST00000412947 Q6ZN92 141 aa8.41□□□□□ -1.06
ZNF3-204ENST00000412947 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
ZNF3-204ENST00000412947 FRAS1Q86XX4 4008 aa8.4□□□□□ -1.06
ZNF3-204ENST00000412947 LRCOL1A6NCL2 159 aa8.4□□□□□ -1.06
ZNF3-204ENST00000412947 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.06
ZNF3-204ENST00000412947 BAGE3Q86Y29 109 aa8.4□□□□□ -1.06
ZNF3-204ENST00000412947 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
ZNF3-204ENST00000412947 BAALCQ8WXS3 180 aa8.4□□□□□ -1.06
ZNF3-204ENST00000412947 CHCHD10Q8WYQ3 142 aaPredicted RBP8.4□□□□□ -1.06
ZNF3-204ENST00000412947 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
ZNF3-204ENST00000412947 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 LECT2O14960 151 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 CCL25O15444 150 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 NPSP0C0P6 89 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 XCL1P47992 114 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 PAPPA-AS1Q5QFB9 102 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 CHCHD1Q96BP2 118 aaKnown RBP8.39□□□□□ -1.07
ZNF3-204ENST00000412947 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 TMEM141Q96I45 108 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 SCGB3A1Q96QR1 104 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 DNAH17Q9UFH2 4485 aa8.39□□□□□ -1.07
ZNF3-204ENST00000412947 IGIPA6NJ69 53 aa8.38□□□□□ -1.07
ZNF3-204ENST00000412947 C1orf196B1AJZ1 125 aa8.38□□□□□ -1.07
ZNF3-204ENST00000412947 VCX2Q9H322 139 aa8.38□□□□□ -1.07
ZNF3-204ENST00000412947 HBDP02042 147 aa8.37□□□□□ -1.07
ZNF3-204ENST00000412947 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
ZNF3-204ENST00000412947 ERASQ7Z444 233 aa8.37□□□□□ -1.07
ZNF3-204ENST00000412947 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
ZNF3-204ENST00000412947 Q8N814 137 aa8.37□□□□□ -1.07
ZNF3-204ENST00000412947 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
ZNF3-204ENST00000412947 USP17L23D6RBM5 183 aa8.36□□□□□ -1.07
ZNF3-204ENST00000412947 WFDC2Q14508 124 aa8.36□□□□□ -1.07
ZNF3-204ENST00000412947 PMCHL1Q16048 86 aa8.36□□□□□ -1.07
ZNF3-204ENST00000412947 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
ZNF3-204ENST00000412947 HSBP1O75506 76 aa8.35□□□□□ -1.07
ZNF3-204ENST00000412947 FOXI1Q12951 378 aa8.35□□□□□ -1.07
ZNF3-204ENST00000412947 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
ZNF3-204ENST00000412947 AMELXQ99217 191 aa8.35□□□□□ -1.07
ZNF3-204ENST00000412947 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
ZNF3-204ENST00000412947 FAT2Q9NYQ8 4349 aa8.35□□□□□ -1.07
ZNF3-204ENST00000412947 A0A096LNJ9 63 aa8.34□□□□□ -1.07
ZNF3-204ENST00000412947 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.34□□□□□ -1.07
ZNF3-204ENST00000412947 KRTAP10-2P60368 255 aa8.34□□□□□ -1.07
ZNF3-204ENST00000412947 ZC2HC1BQ5TFG8 222 aa8.34□□□□□ -1.07
ZNF3-204ENST00000412947 CDPF1Q6NVV7 123 aa8.34□□□□□ -1.07
ZNF3-204ENST00000412947 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
ZNF3-204ENST00000412947 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
ZNF3-204ENST00000412947 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
ZNF3-204ENST00000412947 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
ZNF3-204ENST00000412947 COX7A2LO14548 114 aa8.33□□□□□ -1.08
ZNF3-204ENST00000412947 SERF1AO75920 110 aa8.33□□□□□ -1.08
ZNF3-204ENST00000412947 ATP5LO75964 103 aa8.33□□□□□ -1.08
ZNF3-204ENST00000412947 UBE2D1P51668 147 aa8.33□□□□□ -1.08
ZNF3-204ENST00000412947 LINC00173Q6ZV60 143 aa8.33□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 MALP21145 153 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
ZNF3-204ENST00000412947 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms