RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 H3BNG1 76 aa8.1□□□□□ -1.11
SNRNP35-202ENST00000412157 FGF6P10767 208 aa8.1□□□□□ -1.11
SNRNP35-202ENST00000412157 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
SNRNP35-202ENST00000412157 ZNF664Q8N3J9 261 aa8.1□□□□□ -1.11
SNRNP35-202ENST00000412157 C2orf88Q9BSF0 95 aa8.1□□□□□ -1.11
SNRNP35-202ENST00000412157 CHCHD5Q9BSY4 110 aa8.1□□□□□ -1.11
SNRNP35-202ENST00000412157 PRO1933Q9H354 126 aa8.1□□□□□ -1.11
SNRNP35-202ENST00000412157 DEFB131BA0A096LNP1 70 aa8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 TRAV10A0A0B4J240 114 aa8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 PCP4L1A6NKN8 68 aa8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 ZNF25P17030 456 aaPredicted RBP8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 Q6ZUT4 128 aa8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 OR5A1Q8NGJ0 315 aa8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
SNRNP35-202ENST00000412157 GAGE6Q13070 117 aa8.08□□□□□ -1.12
SNRNP35-202ENST00000412157 MAJINQ3KP22 176 aa8.08□□□□□ -1.12
SNRNP35-202ENST00000412157 ZC2HC1BQ5TFG8 222 aa8.08□□□□□ -1.12
SNRNP35-202ENST00000412157 AMELXQ99217 191 aa8.08□□□□□ -1.12
SNRNP35-202ENST00000412157 NHLRC4P0CG21 123 aaPredicted RBP8.07□□□□□ -1.12
SNRNP35-202ENST00000412157 RNASE13Q5GAN3 156 aaKnown RBP8.06□□□□□ -1.12
SNRNP35-202ENST00000412157 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
SNRNP35-202ENST00000412157 IGLV4-69A0A075B6H9 119 aa8.05□□□□□ -1.12
SNRNP35-202ENST00000412157 HERVK_113P61574 105 aa8.05□□□□□ -1.12
SNRNP35-202ENST00000412157 LELP1Q5T871 98 aa8.05□□□□□ -1.12
SNRNP35-202ENST00000412157 C11orf86A6NJI1 115 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 TMEM262E9PQX1 116 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 ANKRD39Q53RE8 183 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 NFE4Q86UQ8 179 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 STPG4Q8N801 248 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 C15orf53Q8NAA6 179 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 CDC42SE2Q9NRR3 84 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 UQCR10Q9UDW1 63 aa8.04□□□□□ -1.12
SNRNP35-202ENST00000412157 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
SNRNP35-202ENST00000412157 TIRAPP58753 221 aa8.03□□□□□ -1.12
SNRNP35-202ENST00000412157 SEC11AP67812 179 aa8.03□□□□□ -1.12
SNRNP35-202ENST00000412157 TMEM170BQ5T4T1 132 aa8.03□□□□□ -1.12
SNRNP35-202ENST00000412157 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
SNRNP35-202ENST00000412157 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
SNRNP35-202ENST00000412157 TRAV8-6A0A0B4J262 113 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 DDTP30046 118 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 NMUP48645 174 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 UBE2D1P51668 147 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 TCTAP57738 103 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 LYPD5Q6UWN5 251 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 C14orf144Q96I85 54 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 MIEN1Q9BRT3 115 aa8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
SNRNP35-202ENST00000412157 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
SNRNP35-202ENST00000412157 A0A1B0GUV1 79 aa8.01□□□□□ -1.13
SNRNP35-202ENST00000412157 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
SNRNP35-202ENST00000412157 RBX1P62877 108 aa8.01□□□□□ -1.13
SNRNP35-202ENST00000412157 MPV17L2Q567V2 206 aa8.01□□□□□ -1.13
SNRNP35-202ENST00000412157 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
SNRNP35-202ENST00000412157 TENM3Q9P273 2699 aa8□□□□□ -1.13
SNRNP35-202ENST00000412157 TRAV13-1A0A0B4J241 112 aa8□□□□□ -1.13
SNRNP35-202ENST00000412157 COX8AP10176 69 aa8□□□□□ -1.13
SNRNP35-202ENST00000412157 HNRNPA3P51991 378 aaKnown RBP8□□□□□ -1.13
SNRNP35-202ENST00000412157 HERVK_113P63121 156 aa8□□□□□ -1.13
SNRNP35-202ENST00000412157 IGKV3OR2-268A0A0C4DH90 116 aa7.99□□□□□ -1.13
SNRNP35-202ENST00000412157 E9PLD3 99 aa7.99□□□□□ -1.13
SNRNP35-202ENST00000412157 H3BRM9 83 aa7.99□□□□□ -1.13
SNRNP35-202ENST00000412157 FAM19A3Q7Z5A8 133 aa7.99□□□□□ -1.13
SNRNP35-202ENST00000412157 LINC00469Q8N7U9 141 aa7.99□□□□□ -1.13
SNRNP35-202ENST00000412157 TMEM223A0PJW6 202 aa7.98□□□□□ -1.13
SNRNP35-202ENST00000412157 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
SNRNP35-202ENST00000412157 IGKV2D-26A0A0A0MRZ7 120 aa7.97□□□□□ -1.13
SNRNP35-202ENST00000412157 IGLL5B9A064 214 aa7.97□□□□□ -1.13
SNRNP35-202ENST00000412157 SS18Q15532 418 aa7.97□□□□□ -1.13
SNRNP35-202ENST00000412157 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
SNRNP35-202ENST00000412157 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
SNRNP35-202ENST00000412157 DNAH9Q9NYC9 4486 aa7.97□□□□□ -1.13
SNRNP35-202ENST00000412157 COL7A1Q02388 2944 aa7.96□□□□□ -1.13
SNRNP35-202ENST00000412157 IGLV5-45A0A087WSX0 123 aa7.96□□□□□ -1.14
SNRNP35-202ENST00000412157 LEPROTO15243 131 aa7.96□□□□□ -1.14
SNRNP35-202ENST00000412157 DLEU1O43261 78 aa7.96□□□□□ -1.14
SNRNP35-202ENST00000412157 ESRGQ1W209 222 aa7.96□□□□□ -1.14
SNRNP35-202ENST00000412157 CLPSL2Q6UWE3 100 aa7.96□□□□□ -1.14
SNRNP35-202ENST00000412157 PCP2Q8IVA1 136 aa7.96□□□□□ -1.14
SNRNP35-202ENST00000412157 BOD1L2Q8IYS8 172 aa7.96□□□□□ -1.14
SNRNP35-202ENST00000412157 LINC00959A0A1B0GUT2 108 aa7.95□□□□□ -1.14
SNRNP35-202ENST00000412157 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
SNRNP35-202ENST00000412157 CCL25O15444 150 aa7.95□□□□□ -1.14
SNRNP35-202ENST00000412157 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
SNRNP35-202ENST00000412157 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
SNRNP35-202ENST00000412157 CDKN2A-AS1Q9UH64 79 aa7.95□□□□□ -1.14
SNRNP35-202ENST00000412157 IGHV3-64A0A075B6Q5 118 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 J3QQQ9 107 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 IGHV3-30P01768 117 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 IGHV3-33P01772 117 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 CRPP02741 224 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 SPINK8P0C7L1 97 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 IGHV3-30-3P0DP02 117 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 IGHV3-30-5P0DP03 117 aa7.94□□□□□ -1.14
SNRNP35-202ENST00000412157 CCL18P55774 89 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms