RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 TPPP2P59282 170 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 RPL13AP3Q6NVV1 102 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 MRPL54Q6P161 138 aaKnown RBP-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 COMMD6Q7Z4G1 85 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 C5orf38Q86SI9 138 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 MYOZ3Q8TDC0 251 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 TP53AIP1Q9HCN2 124 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 PLXNB2O15031 1838 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 LRP1Q07954 4544 aaKnown RBP-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 KIF21AQ7Z4S6 1674 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 ZNF292O60281 2723 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 AKAP6Q13023 2319 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 LOC285095A0A1B0GVY8 99 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 OOSP1A8MZH6 123 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 HMGN4O00479 90 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 DCDP81605 110 aaKnown RBP-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 C9orf153Q5TBE3 101 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 Q5VSD8 79 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 PP6455Q8WZ26 134 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 CACNA1AO00555 2505 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 CHD9Q3L8U1 2897 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 NCOR1O75376 2440 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 C2CD3Q4AC94 2353 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 FLNCQ14315 2725 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 PTPRQQ9UMZ3 2332 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 CELSR1Q9NYQ6 3014 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 A2ML1A8K2U0 1454 aa-0.03□□□□□ -2.41
HDAC9-205ENST00000411993 SBF2Q86WG5 1849 aa-0.03□□□□□ -2.42
HDAC9-205ENST00000411993 PPRC1Q5VV67 1664 aaKnown RBP-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 RIMS1Q86UR5 1692 aaKnown RBP-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 LAMC1P11047 1609 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 TRBV6-1A0A0K0K1D8 114 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 EFCAB10A6NFE3 127 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 CHKB-CPT1BH3BT56 60 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 SFT2D2O95562 160 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 TNFP01375 233 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 PIGYQ3MUY2 71 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 LINC00472Q9H8W2 130 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 LINC00474Q9P2X8 69 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 UQCR10Q9UDW1 63 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 LINC01558Q9Y6Z2 57 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 PTPN13Q12923 2485 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 BCL9LQ86UU0 1499 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 C10orf71Q711Q0 1435 aa-0.04□□□□□ -2.42
HDAC9-205ENST00000411993 QRICH2Q9H0J4 1663 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 ROBO1Q9Y6N7 1651 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 PSME4Q14997 1843 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 PLCE1Q9P212 2302 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 UBE2L5PA0A1B0GUS4 154 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 A0A1B0GV90 55 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 FAM24AA6NFZ4 105 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 I3L2K1 104 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 SPRR1AP35321 89 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 UBE2L3P68036 154 aaKnown RBP-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 NXT2Q9NPJ8 142 aaKnown RBP-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 FAIMQ9NVQ4 179 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 PKDREJQ9NTG1 2253 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 DOPEY2Q9Y3R5 2298 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 SHANK2Q9UPX8 1470 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 CUL7Q14999 1698 aa-0.05□□□□□ -2.42
HDAC9-205ENST00000411993 NALCNQ8IZF0 1738 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 MGPP08493 103 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 ATP5EP56381 51 aaPredicted RBP-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 GNG11P61952 73 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 SARNPP82979 210 aaKnown RBP-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 SVBPQ8N300 66 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 MYOM2P54296 1465 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 PAPPAQ13219 1627 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 SHROOM2Q13796 1616 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 NEBP20929 6669 aa-0.06□□□□□ -2.42
HDAC9-205ENST00000411993 KDM5AP29375 1690 aaKnown RBP-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 MYOM1P52179 1685 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 DLEU1O43261 78 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 UBA52P62987 128 aaKnown RBP-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 DPH3P1Q9H4G8 78 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 MANBALQ9NQG1 85 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 ARL2-SNX15V9GYD0 113 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 RAPGEF6Q8TEU7 1601 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 NSD1Q96L73 2696 aaPredicted RBP-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 SMG6Q86US8 1419 aaKnown RBP-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 TCHHQ07283 1943 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 USF3Q68DE3 2245 aa-0.07□□□□□ -2.42
HDAC9-205ENST00000411993 ARHGEF12Q9NZN5 1544 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 F6UZH7 168 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 IGLC1P0CG04 106 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 COX6B1P14854 86 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 S100A1P23297 94 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 GNG4P50150 75 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 PPP3R1P63098 170 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 WHAMMP3Q1A5X7 153 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 FAM223AQ8IWN6 122 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 FDCSPQ8NFU4 85 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 TMEM263Q8WUH6 116 aaKnown RBP-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 CDC42SE2Q9NRR3 84 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 GNG8Q9UK08 70 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 IER3IP1Q9Y5U9 82 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 SCAPERQ9BY12 1400 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 NSD3Q9BZ95 1437 aa-0.08□□□□□ -2.42
HDAC9-205ENST00000411993 ARHGEF5Q12774 1597 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms