RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CRIP3Q6Q6R5 217 aa13.59□□□□□ -0.23
HCG11-201ENST00000411553 M0R2N4 97 aa13.59□□□□□ -0.23
HCG11-201ENST00000411553 C6orf99Q4VX62 202 aa13.59□□□□□ -0.23
HCG11-201ENST00000411553 NCOA6Q14686 2063 aaPredicted RBP13.59□□□□□ -0.23
HCG11-201ENST00000411553 TEX49A0A1B0GTD5 131 aa13.59□□□□□ -0.23
HCG11-201ENST00000411553 CD164L2Q6UWJ8 174 aa13.59□□□□□ -0.23
HCG11-201ENST00000411553 SDIM1Q6ZPB5 146 aa13.59□□□□□ -0.23
HCG11-201ENST00000411553 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.23
HCG11-201ENST00000411553 RNF185Q96GF1 192 aa13.58□□□□□ -0.24
HCG11-201ENST00000411553 PYGO1Q9Y3Y4 419 aa13.58□□□□□ -0.24
HCG11-201ENST00000411553 ZNF706Q9Y5V0 76 aaPredicted RBP13.58□□□□□ -0.24
HCG11-201ENST00000411553 IGKV2-28A0A075B6P5 120 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 IGKV2D-28P01615 120 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 ATP5EP2Q5VTU8 51 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 TRBV27A0A0K0K1C4 114 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 LELP1Q5T871 98 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 PRO3102Q9H379 93 aa13.57□□□□□ -0.24
HCG11-201ENST00000411553 TRBV6-5A0A0K0K1A5 114 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 Q8N6K4 173 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 U3KQK5 164 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 CCKP06307 115 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 DSCAML1Q8TD84 2053 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 SVIPQ8NHG7 77 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 WFDC10AQ9H1F0 79 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 PTPN13Q12923 2485 aa13.56□□□□□ -0.24
HCG11-201ENST00000411553 ENHOQ6UWT2 76 aa13.55□□□□□ -0.24
HCG11-201ENST00000411553 IGLV4-69A0A075B6H9 119 aa13.55□□□□□ -0.24
HCG11-201ENST00000411553 C18orf65Q6ZTR6 163 aa13.55□□□□□ -0.24
HCG11-201ENST00000411553 C20orf197Q8N268 126 aa13.55□□□□□ -0.24
HCG11-201ENST00000411553 PPDPFQ9H3Y8 114 aa13.55□□□□□ -0.24
HCG11-201ENST00000411553 TRIAP1O43715 76 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 M0R378 163 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 LY6G6CO95867 125 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 C9orf85Q96MD7 179 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 DHRS4-AS1Q9P1J3 65 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 LTBP2Q14767 1821 aa13.54□□□□□ -0.24
HCG11-201ENST00000411553 SORL1Q92673 2214 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 ZNF106Q9H2Y7 1883 aaKnown RBP13.53□□□□□ -0.24
HCG11-201ENST00000411553 TRBV30A0A0K0K1B3 111 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 TSHBP01222 138 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 MAPKAPK5-AS1Q8N8E1 139 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 DSCAMO60469 2012 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 LOC100131303A0A0U1RQF7 123 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 LOC107984640A0A0U1RRK4 108 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 C3orf22Q8N5N4 141 aa13.53□□□□□ -0.24
HCG11-201ENST00000411553 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.24
HCG11-201ENST00000411553 LINC00526Q96FQ7 95 aa13.52□□□□□ -0.24
HCG11-201ENST00000411553 RNASE3P12724 160 aaKnown RBP13.52□□□□□ -0.25
HCG11-201ENST00000411553 LINC00959A0A1B0GUT2 108 aa13.51□□□□□ -0.25
HCG11-201ENST00000411553 IGLV1-40P01703 118 aa13.51□□□□□ -0.25
HCG11-201ENST00000411553 K7ERS5 55 aa13.51□□□□□ -0.25
HCG11-201ENST00000411553 UBE2D4Q9Y2X8 147 aa13.51□□□□□ -0.25
HCG11-201ENST00000411553 C3orf84H3BNL1 204 aa13.51□□□□□ -0.25
HCG11-201ENST00000411553 IGLV2-11P01706 119 aa13.51□□□□□ -0.25
HCG11-201ENST00000411553 BRK1Q8WUW1 75 aa13.5□□□□□ -0.25
HCG11-201ENST00000411553 PRR14LQ5THK1 2151 aa13.5□□□□□ -0.25
HCG11-201ENST00000411553 TIMM17BO60830 172 aa13.5□□□□□ -0.25
HCG11-201ENST00000411553 A8MZ25 164 aa13.5□□□□□ -0.25
HCG11-201ENST00000411553 KLLNB2CW77 178 aa13.5□□□□□ -0.25
HCG11-201ENST00000411553 Q6ZS46 218 aa13.49□□□□□ -0.25
HCG11-201ENST00000411553 SPTSSBQ8NFR3 76 aa13.49□□□□□ -0.25
HCG11-201ENST00000411553 CACNA1AO00555 2505 aa13.49□□□□□ -0.25
HCG11-201ENST00000411553 PRR9Q5T870 116 aa13.48□□□□□ -0.25
HCG11-201ENST00000411553 HRCT1Q6UXD1 115 aa13.48□□□□□ -0.25
HCG11-201ENST00000411553 ALPK3Q96L96 1907 aa13.48□□□□□ -0.25
HCG11-201ENST00000411553 Q6ZQY7 126 aa13.48□□□□□ -0.25
HCG11-201ENST00000411553 NDUFV3P56181 108 aaKnown RBP13.47□□□□□ -0.25
HCG11-201ENST00000411553 NANOS2P60321 138 aaKnown RBP13.47□□□□□ -0.25
HCG11-201ENST00000411553 A0A0J9YWU9 116 aa13.47□□□□□ -0.25
HCG11-201ENST00000411553 NRACQ8N912 160 aa13.47□□□□□ -0.25
HCG11-201ENST00000411553 UQCRQO14949 82 aa13.46□□□□□ -0.25
HCG11-201ENST00000411553 MRPS36P82909 103 aaKnown RBP13.46□□□□□ -0.25
HCG11-201ENST00000411553 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
HCG11-201ENST00000411553 MRGPRG-AS1Q2M3A8 158 aa13.46□□□□□ -0.25
HCG11-201ENST00000411553 UBE2D3P61077 147 aa13.46□□□□□ -0.25
HCG11-201ENST00000411553 LINC00474Q9P2X8 69 aa13.46□□□□□ -0.25
HCG11-201ENST00000411553 FAM236DA0A1B0GTK5 79 aa13.46□□□□□ -0.26
HCG11-201ENST00000411553 MT-ATP8P03928 68 aa13.46□□□□□ -0.26
HCG11-201ENST00000411553 FAM236CP0DP71 79 aa13.46□□□□□ -0.26
HCG11-201ENST00000411553 RPL37AP8A6NKH3 93 aa13.46□□□□□ -0.26
HCG11-201ENST00000411553 MPLKIPQ8TAP9 179 aa13.45□□□□□ -0.26
HCG11-201ENST00000411553 OXLD1Q5BKU9 147 aa13.45□□□□□ -0.26
HCG11-201ENST00000411553 C11orf21Q9P2W6 132 aa13.45□□□□□ -0.26
HCG11-201ENST00000411553 PLAC8L1A1L4L8 177 aa13.44□□□□□ -0.26
HCG11-201ENST00000411553 PRM2P04554 102 aa13.44□□□□□ -0.26
HCG11-201ENST00000411553 TP73-AS1Q9UF72 201 aa13.44□□□□□ -0.26
HCG11-201ENST00000411553 IGHV4-30-4P0DP06 118 aa13.44□□□□□ -0.26
HCG11-201ENST00000411553 COX17Q14061 63 aa13.44□□□□□ -0.26
HCG11-201ENST00000411553 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
HCG11-201ENST00000411553 NDUFA7O95182 113 aa13.43□□□□□ -0.26
HCG11-201ENST00000411553 MED12LQ86YW9 2145 aa13.43□□□□□ -0.26
HCG11-201ENST00000411553 IGLV9-49A0A0B4J1Y8 123 aa13.42□□□□□ -0.26
HCG11-201ENST00000411553 WFDC13Q8IUB5 93 aa13.42□□□□□ -0.26
HCG11-201ENST00000411553 PRR15LQ9BU68 103 aa13.42□□□□□ -0.26
HCG11-201ENST00000411553 POLR2KP53803 58 aaKnown RBP13.42□□□□□ -0.26
HCG11-201ENST00000411553 UBE2D2P62837 147 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms