RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ZNF726P1Q15940 193 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 GAGE2EQ4V326 116 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 AKR1C8PQ5T2L2 129 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 TEX261Q6UWH6 196 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 Q6ZNX1 250 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 LINC00173Q6ZV60 143 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 FAM19A5Q7Z5A7 132 aaPredicted RBP1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 MRPL52Q86TS9 123 aaKnown RBP1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 LINC00337Q8N6G1 96 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 ENKURQ8TC29 256 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 MRAP2Q96G30 205 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 FAM210AQ96ND0 272 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 OPRPNQ99935 248 aaPredicted RBP1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 PPDPFQ9H3Y8 114 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 CDC42SE2Q9NRR3 84 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 MRPL35Q9NZE8 188 aaKnown RBP1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 GAGE2DQ9UEU5 116 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 ALG5Q9Y673 324 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 MUC17Q685J3 4493 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 BORCS7-ASMTA0A0B4J1R7 106 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 TRAV13-1A0A0B4J241 112 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 MAP1LC3B2A6NCE7 125 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 I3L3M4 83 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 NDUFA1O15239 70 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 PAGE4O60829 102 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 PFDN1O60925 122 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 TSHBP01222 138 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 IFNA1P01562 189 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 TLX1NBP0CAT3 122 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 RPL28P46779 137 aaKnown RBP1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 SEC61BP60468 96 aaKnown RBP1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 SMAGPQ0VAQ4 97 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 TWIST1Q15672 202 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 ASB16-AS1Q495Z4 193 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 LYZL1Q6UWQ5 148 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 TMUB2Q71RG4 321 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 SMIM15Q7Z3B0 74 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 C5orf38Q86SI9 138 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 KRTAP7-1Q8IUC3 87 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 C9orf62Q8N4C0 152 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 LINC00304Q8N9R0 145 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 GATD1Q8NB37 220 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 OR10D4PQ8NGN7 298 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 MAP1LC3BQ9GZQ8 125 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 CTDSP1Q9GZU7 261 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 SMDT1Q9H4I9 107 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 CYTL1Q9NRR1 136 aa1.37□□□□□ -2.19
RNU4-53P-201ENST00000410828 IGKV2D-26A0A0A0MRZ7 120 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 TRBV6-5A0A0K0K1A5 114 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 A0A1B0GVG6 124 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 SCO2A0A1W2PP80 73 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 C7orf77A4D0Y5 90 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 NDUFC2-KCTD14E9PQ53 114 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 RPL35P42766 123 aaKnown RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 DEFA1P59665 94 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 FAM229BQ4G0N7 80 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 LBHQ53QV2 105 aaPredicted RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 RPL7L1Q6DKI1 246 aaKnown RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 UNQ6190/PRO20217Q6UXQ8 127 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 FP248Q71RG6 208 aaPredicted RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 ORAOV1Q8WV07 137 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 SFT2D1Q8WV19 159 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 RPL39LQ96EH5 51 aaKnown RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 PACRGQ96M98 296 aaPredicted RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 MARVELD1Q9BSK0 173 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 CNFNQ9BYD5 112 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 ST20Q9HBF5 79 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 BIN3Q9NQY0 253 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 TMEM242Q9NWH2 141 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 ANAPC11Q9NYG5 84 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 C6orf48Q9UBA6 75 aa1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 CSDC2Q9Y534 153 aaKnown RBP1.36□□□□□ -2.19
RNU4-53P-201ENST00000410828 IGHV3OR16-9A0A0B4J2B5 98 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 TRBV30A0A0K0K1B3 111 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 TRBV27A0A0K0K1C4 114 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 RAB19A4D1S5 217 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 VCYO14598 125 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 BCE1O60756 84 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 FCER1GP30273 86 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 CTRLP40313 264 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 UBE2AP49459 152 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 POLR2KP53803 58 aaKnown RBP1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 FOXA3P55318 350 aaPredicted RBP1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 CCL20P78556 96 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 MT1HP80294 61 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 KRTAP13-3Q3SY46 172 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 KRTAP13-2Q52LG2 175 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 C4orf48Q5BLP8 95 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 CENPWQ5EE01 88 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 RNASE13Q5GAN3 156 aaKnown RBP1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 C9orf129Q5T035 196 aaKnown RBP1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 LINC00242Q5T6M2 205 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 C10orf25Q5T742 122 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 LCE2CQ5TA81 110 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 SPAG11AQ6PDA7 123 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 KCNRGQ8N5I3 272 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 MBD3L1Q8WWY6 194 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 S100ZQ8WXG8 99 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 C11orf52Q96A22 123 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms