RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 HMGXB3Q12766 1538 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 TULP4Q9NRJ4 1543 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 FMN2Q9NZ56 1722 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 TRBV7-4A0A0J9YYF1 115 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 A6NIN4 97 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 PIPP12273 146 aaPredicted RBP-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 UBE2G1P62253 170 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 H1FX-AS1Q4G0G2 97 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 STX12Q86Y82 276 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 VSTM2AQ8TAG5 236 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 THEM6Q8WUY1 208 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 USMG5Q96IX5 58 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 CALML5Q9NZT1 146 aa-1.42□□□□□ -2.64
RNU4-55P-201ENST00000410731 ERCC6Q03468 1493 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 PXDNQ92626 1479 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 PAPPA2Q9BXP8 1791 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 ARHGEF12Q9NZN5 1544 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 SMIM24O75264 130 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 MT1HP80294 61 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 CCDC115Q96NT0 180 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 AMELXQ99217 191 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 LSM2Q9Y333 95 aaKnown RBP-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 MYH13Q9UKX3 1938 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 NBEAL2Q6ZNJ1 2754 aa-1.43□□□□□ -2.64
RNU4-55P-201ENST00000410731 KIF21AQ7Z4S6 1674 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 LINC00959A0A1B0GUT2 108 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 A0A1W2PRE2 83 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 PFDN1O60925 122 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 TMEM78Q5T7P6 136 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 Q6AWC8 147 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 SPTSSBQ8NFR3 76 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 BANF2Q9H503 90 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 V9GYH0 126 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 MYOM3Q5VTT5 1437 aa-1.44□□□□□ -2.64
RNU4-55P-201ENST00000410731 FRYQ5TBA9 3013 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 COL12A1Q99715 3063 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 NWD2Q9ULI1 1742 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 SETBP1Q9Y6X0 1596 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 DAPK1P53355 1430 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 MT-ND4LP03901 98 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 PAEPP09466 180 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 SERPINB1P30740 379 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 TRIOO75962 3097 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 CEP295Q9C0D2 2601 aa-1.45□□□□□ -2.64
RNU4-55P-201ENST00000410731 ITPR1Q14643 2758 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 SYNMO15061 1565 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 ABCA13Q86UQ4 5058 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 F8VRH5 84 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 ARPC5O15511 151 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 DPM2O94777 84 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 CBLN1P23435 193 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 CCL8P80075 99 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 PPP1R2P3Q6NXS1 205 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 BAGE2Q86Y30 109 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 SHANK2Q9UPX8 1470 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 ACACBO00763 2458 aa-1.46□□□□□ -2.64
RNU4-55P-201ENST00000410731 ARHGEF10O15013 1369 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 CSMD1Q96PZ7 3565 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 OVOS2A0A0G2JMS6 1433 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 C5orf42Q9H799 3197 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 UQCR11O14957 56 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 SSSCA1O60232 199 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 APOC3P02656 99 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 MIC13Q5XKP0 118 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 NDUFA4L2Q9NRX3 87 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 LENEPQ9Y5L5 61 aa-1.47□□□□□ -2.64
RNU4-55P-201ENST00000410731 MAGI1Q96QZ7 1491 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 TRBV20-1A0A075B6N2 111 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 TPPP2P59282 170 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 S100A7L2Q5SY68 101 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 TMEM244Q5VVB8 128 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 SCIMPQ6UWF3 145 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 OR8I2Q8N0Y5 310 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 Q8N8P6 123 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 MNS1Q8NEH6 495 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 OR9Q1Q8NGQ5 310 aa-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 MAGOHBQ96A72 148 aaKnown RBP-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 MRPL40Q9NQ50 206 aaKnown RBP-1.48□□□□□ -2.65
RNU4-55P-201ENST00000410731 C9orf92A6NGG3 77 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 SIX6O95475 246 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 IL5P05113 134 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 UBE2D3P61077 147 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 UBE2D2P62837 147 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 C10orf128Q5T292 105 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 CTAGE3PQ8IX95 158 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 HOPXQ9BPY8 73 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 BOLA2Q9H3K6 86 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 SRCAPQ6ZRS2 3230 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 RAPGEF6Q8TEU7 1601 aa-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 EIF3AQ14152 1382 aaKnown RBP-1.49□□□□□ -2.65
RNU4-55P-201ENST00000410731 PATJQ8NI35 1801 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 RANBP2P49792 3224 aaKnown RBP-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 DNAH17Q9UFH2 4485 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 SPAARA0A1B0GVQ0 90 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 ALX1Q15699 326 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 TMEM35BQ8NCS4 154 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 TMEM263Q8WUH6 116 aaKnown RBP-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 AQP10Q96PS8 301 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 SEC11CQ9BY50 192 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 SAR1AQ9NR31 198 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms